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FFCP PHASE1:Mm9::chr2:24618656..24618673,-: Difference between revisions

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|id=chr2:24618656..24618673,-
|id=chr2:24618656..24618673,-
|ontology_enrichment_celltype=CL:0000540!8.81e-19!33;CL:0000047!8.81e-19!33;CL:0000031!8.81e-19!33;CL:0000404!8.81e-19!33;CL:0000117!2.88e-15!23;CL:0000337!2.88e-15!23;CL:0000221!9.75e-14!44;CL:0000133!9.75e-14!44;CL:0002319!1.87e-13!43;CL:0000393!2.87e-13!39;CL:0000211!2.87e-13!39;CL:0000055!2.74e-09!50
|ontology_enrichment_celltype=CL:0000540!8.81e-19!33;CL:0000047!8.81e-19!33;CL:0000031!8.81e-19!33;CL:0000404!8.81e-19!33;CL:0000117!2.88e-15!23;CL:0000337!2.88e-15!23;CL:0000221!9.75e-14!44;CL:0000133!9.75e-14!44;CL:0002319!1.87e-13!43;CL:0000393!2.87e-13!39;CL:0000211!2.87e-13!39;CL:0000055!2.74e-09!50
|ontology_enrichment_celltype_v019_2=CL:0000540,6.14e-29,33;CL:0000047,6.14e-29,33;CL:0000031,6.14e-29,33;CL:0000404,6.14e-29,33;CL:0000117,1.22e-24,23;CL:0000337,1.22e-24,23;CL:0000393,7.03e-23,39;CL:0000211,7.03e-23,39;CL:0002319,8.42e-20,43;CL:0000221,4.02e-19,44;CL:0000133,4.02e-19,44;CL:0002321,1.54e-08,70;CL:0000107,8.89e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.81e-31!75;UBERON:0001016!2.81e-31!75;UBERON:0001017!4.56e-31!73;UBERON:0005743!4.56e-31!73;UBERON:0004121!1.70e-30!102;UBERON:0000924!1.70e-30!102;UBERON:0006601!1.70e-30!102;UBERON:0002346!2.25e-29!71;UBERON:0003075!2.25e-29!71;UBERON:0007284!2.25e-29!71;UBERON:0000033!1.42e-24!63;UBERON:0001049!3.64e-24!52;UBERON:0005068!3.64e-24!52;UBERON:0006241!3.64e-24!52;UBERON:0007135!3.64e-24!52;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0003056!4.04e-22!49;UBERON:0002616!4.52e-22!49;UBERON:0002020!1.26e-20!34;UBERON:0003080!1.39e-19!40;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0002791!3.64e-17!29;UBERON:0003528!3.64e-17!29;UBERON:0001893!3.64e-17!29;UBERON:0007811!9.00e-15!86;UBERON:0000153!7.49e-13!94;UBERON:0000956!4.47e-12!21;UBERON:0001869!4.47e-12!21;UBERON:0000203!4.47e-12!21;UBERON:0002619!5.11e-10!17;UBERON:0002021!5.96e-09!10;UBERON:0000411!5.96e-09!10;UBERON:0001950!5.96e-09!10
|ontology_enrichment_uberon=UBERON:0000073!2.81e-31!75;UBERON:0001016!2.81e-31!75;UBERON:0001017!4.56e-31!73;UBERON:0005743!4.56e-31!73;UBERON:0004121!1.70e-30!102;UBERON:0000924!1.70e-30!102;UBERON:0006601!1.70e-30!102;UBERON:0002346!2.25e-29!71;UBERON:0003075!2.25e-29!71;UBERON:0007284!2.25e-29!71;UBERON:0000033!1.42e-24!63;UBERON:0001049!3.64e-24!52;UBERON:0005068!3.64e-24!52;UBERON:0006241!3.64e-24!52;UBERON:0007135!3.64e-24!52;UBERON:0000955!1.22e-22!50;UBERON:0006238!1.22e-22!50;UBERON:0003056!4.04e-22!49;UBERON:0002616!4.52e-22!49;UBERON:0002020!1.26e-20!34;UBERON:0003080!1.39e-19!40;UBERON:0002780!4.68e-19!39;UBERON:0001890!4.68e-19!39;UBERON:0006240!4.68e-19!39;UBERON:0002791!3.64e-17!29;UBERON:0003528!3.64e-17!29;UBERON:0001893!3.64e-17!29;UBERON:0007811!9.00e-15!86;UBERON:0000153!7.49e-13!94;UBERON:0000956!4.47e-12!21;UBERON:0001869!4.47e-12!21;UBERON:0000203!4.47e-12!21;UBERON:0002619!5.11e-10!17;UBERON:0002021!5.96e-09!10;UBERON:0000411!5.96e-09!10;UBERON:0001950!5.96e-09!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.52e-48,73;UBERON:0001016,2.08e-46,75;UBERON:0002346,1.68e-40,64;UBERON:0003075,1.68e-40,64;UBERON:0007284,1.68e-40,64;UBERON:0000073,5.01e-40,54;UBERON:0004121,1.24e-39,95;UBERON:0000924,1.24e-39,95;UBERON:0006601,1.24e-39,95;UBERON:0001049,1.63e-37,52;UBERON:0005068,1.63e-37,52;UBERON:0006241,1.63e-37,52;UBERON:0007135,1.63e-37,52;UBERON:0002020,1.59e-33,34;UBERON:0010371,1.77e-33,73;UBERON:0000955,9.99e-32,47;UBERON:0006238,9.99e-32,47;UBERON:0002616,8.48e-31,46;UBERON:0003080,1.17e-28,40;UBERON:0003056,1.59e-28,49;UBERON:0002780,8.84e-28,39;UBERON:0001890,8.84e-28,39;UBERON:0006240,8.84e-28,39;UBERON:0003528,1.11e-27,29;UBERON:0002791,1.11e-27,29;UBERON:0001893,1.11e-27,29;UBERON:0010314,2.09e-24,92;UBERON:0000956,4.26e-19,21;UBERON:0001869,4.26e-19,21;UBERON:0000203,4.26e-19,21;UBERON:0002619,1.24e-15,17;UBERON:0002021,5.37e-14,10;UBERON:0000411,5.37e-14,10;UBERON:0001950,5.37e-14,10;UBERON:0000025,1.17e-09,114;UBERON:0002420,1.24e-09,8;UBERON:0007245,1.24e-09,8;UBERON:0010009,1.24e-09,8;UBERON:0010011,1.24e-09,8;UBERON:0000454,1.24e-09,8;UBERON:0003076,6.57e-09,12;UBERON:0003057,6.57e-09,12;UBERON:0004111,3.18e-08,122;UBERON:0002240,1.52e-07,6;UBERON:0005174,1.52e-07,6;UBERON:0001137,1.52e-07,6;UBERON:0011216,2.45e-07,194;UBERON:0001948,6.80e-07,5;UBERON:0002315,6.80e-07,5;UBERON:0002410,8.89e-07,9
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,6.27181028664753,7.40587370980846,8.87363964908651,0.338844532069132,0,0,0,0,0,0,1.97010263386108,2.29510095163874,2.52389953621658,5.71301968807607,4.8591079009355,2.32732518508413,2.39613677545591,3.67687514644008,3.30347642998166,4.72443150915195,5.68344173048101,6.4624280987795,5.94669683415663,5.73004707612436,3.35019598801657,4.50210088025344,7.79271063661732,7.95497180778903,5.83723891276322,4.65998614563251,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.346970653532272,2.13125834818499,0.691846491768175,0.60289056221049,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,5.27005434620785,4.81727425670947,0,0,0,0,2.39665023047716,4.57500602818627,2.63874139437015,6.60532416730651,8.18289463457058,4.36354893575076,5.02947915510049,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0.919608417733892,0.900310649026746,1.20563854268572,2.24520447199382,2.0498195245576,1.03071897015702,1.55222022443409,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,4.52780294468852,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.04750385139728,0,0,2.83957397474631,1.95219372148319,3.87762115919038,0.238968797952552,1.78238939265915,1.41538265394416,2.42886421004937,5.26060544240361,3.16230222357219,2.57057053137446,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,1.24858172321449,1.15184314421485,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.117357238645754,0.2604087696879,0.524296722128554,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0,0,0,7.90652579663893,9.20650473014354,9.73922372846974,7.73339320546594,8.22099023724771,9.06472676867641,7.42524750254986,7.20513925158753,6.79713613476307,7.7664046762773,0.207574695168353,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,0.551530525350042,0.888986911206461,1.64828045791115,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.03383844120104,0.476293691283074,1.50649623728312,1.35036454324594,1.23625770240992,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,0.581385666529314,1.2234219453993,0.930760686808441,0.73171189149109,1.05227884575137,1.22223702461276,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,0.77468420592983,0.771626443924566,2.24829520144151,1.16965804222704,2.36358159453128,0.765153328275374,0.441182838239031,0
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0.159992422793407,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0.419959264876088,0,0,0,0,0,0,0,6.27181028664753,7.40587370980846,8.87363964908651,0.338844532069132,0,0,0,0,0,0,1.97010263386108,2.29510095163874,2.52389953621658,5.71301968807607,4.8591079009355,2.32732518508413,2.39613677545591,3.67687514644008,3.30347642998166,4.72443150915195,5.68344173048101,6.4624280987795,5.94669683415663,5.73004707612436,3.35019598801657,4.50210088025344,7.79271063661732,7.95497180778903,5.83723891276322,4.65998614563251,0.227178579999552,0.604572480854284,0,0,0,0,0,0,0,0,0,0,0.845060518660083,0,0,0,0,0,0,0.11418387971906,0,0.742210695324124,0.346970653532272,2.13125834818499,0.691846491768175,0.60289056221049,0.470354828542819,0,0.247194967734374,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,5.27005434620785,4.81727425670947,0,0,0,0,2.39665023047716,4.57500602818627,2.63874139437015,6.60532416730651,8.18289463457058,4.36354893575076,5.02947915510049,0,0.124406970610093,0,0.420883711772948,0.130120442962704,0.919608417733892,0.900310649026746,1.20563854268572,2.24520447199382,2.0498195245576,1.03071897015702,1.55222022443409,0,0,0.351902248327898,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.88811855979556,4.52780294468852,0,0,0,0,0.257734922644187,0.403367049246685,0.22237804384487,0.380451252225118,0,0.494096864172033,0.251335208800269,0.397912944082302,0.38992817423824,0,0.216138049874694,0.199141273254367,0,0.228497025219458,0,0.203651327845314,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.72936002979246,3.04750385139728,0,0,2.83957397474631,1.95219372148319,3.87762115919038,0.238968797952552,1.78238939265915,1.41538265394416,2.42886421004937,5.26060544240361,3.16230222357219,2.57057053137446,0,0.35613120733451,0,0,0,0.242780636154981,0.302323556964751,0.754420319023592,0,0.307435147943927,0,0,0,0,0,0,1.36175842301515,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,1.24858172321449,1.15184314421485,1.522324745573,0.23467170806371,0.21183207086382,0.220528398054962,0,0.161464426695906,0,0,0,0,2.03967832211561,0,0,0,0,0,0,0.169978429993855,0,0,0,0.158167996790568,0,0.324016022465404,0.209088296014469,0.218362563746178,0.269728692769641,0.41326727862668,0,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0.388902376688095,0.387479470433193,0.337912250981556,0.117357238645754,0.2604087696879,0.524296722128554,0.241584120826006,0,0.316011120628178,0.202725215290164,0.102710957164827,0.25984164595559,0,0,0,0.147689527174577,0,0.0762068066549998,0.100826185136841,0.0974578807397524,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0.187682475451182,0,0,0,7.90652579663893,9.20650473014354,9.73922372846974,7.73339320546594,8.22099023724771,9.06472676867641,7.42524750254986,7.20513925158753,6.79713613476307,7.7664046762773,0.207574695168353,0.798049746802062,1.02440163452481,0.729320151204882,0.419226325255965,0.551530525350042,0.888986911206461,1.64828045791115,0.962757628775446,0.758091635291392,1.2673964994512,0.754505365544305,0.842773567228942,0.89635213366817,1.03383844120104,0.476293691283074,1.50649623728312,1.35036454324594,1.23625770240992,1.03039244094078,1.71434626192708,1.77475806159337,0.715308569841963,0.581385666529314,1.2234219453993,0.930760686808441,0.73171189149109,1.05227884575137,1.22223702461276,0.561142271657738,0.830445126869219,0.689531376628944,0.818462086339379,0.77468420592983,0.771626443924566,2.24829520144151,1.16965804222704,2.36358159453128,0.765153328275374,0.441182838239031,0
|short_description=p2@Cacna1b
|short_description=p2@Cacna1b
}}
}}

Revision as of 03:23, 14 November 2012

Short description:p2@Cacna1b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Cacna1b_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 0bp_to_ENSMUST00000070864, NM_007579, uc008ipe.1, uc008ipf.1_5end
EntrezGene:Cacna1b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Cacna1b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.28
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C36.27
Mouse Granule cells, donor2.CNhs12357.11731-123E37.41
Mouse Granule cells, donor3.CNhs12108.11636-122C78.87
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.97
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.30
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.72
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D75.68
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D46.46
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.95
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.35
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I67.79
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.84
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.66
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.85
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B25.27
cerebellum, neonate N30.CNhs11135.1395-42I24.82
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A42.40
corpus striatum, adult.CNhs10487.19-21D84.58
corpus striatum, neonate N00.CNhs11226.630-43F12.64
cortex, adult.CNhs10473.12-14D56.61
cortex, neonate N30.CNhs11107.1392-42F28.18
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B25.03
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G81.03
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.89
hippocampus, neonate N00.CNhs11228.627-43G14.53
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.73
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E33.88
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.78
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D55.26
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.16
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G81.36
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A17.91
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.74
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D77.73
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.06
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A67.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.21
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.77
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.84
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.77
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.93
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I52.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system3.52e-4873
nervous system2.08e-4675
neurectoderm1.68e-4064
neural plate1.68e-4064
presumptive neural plate1.68e-4064
regional part of nervous system5.01e-4054
ectoderm-derived structure1.24e-3995
ectoderm1.24e-3995
presumptive ectoderm1.24e-3995
neural tube1.63e-3752
neural rod1.63e-3752
future spinal cord1.63e-3752
neural keel1.63e-3752
gray matter1.59e-3334
ecto-epithelium1.77e-3373
brain9.99e-3247
future brain9.99e-3247
regional part of brain8.48e-3146
anterior neural tube1.17e-2840
pre-chordal neural plate1.59e-2849
regional part of forebrain8.84e-2839
forebrain8.84e-2839
future forebrain8.84e-2839
brain grey matter1.11e-2729
regional part of telencephalon1.11e-2729
telencephalon1.11e-2729
structure with developmental contribution from neural crest2.09e-2492
cerebral cortex4.26e-1921
cerebral hemisphere4.26e-1921
pallium4.26e-1921
regional part of cerebral cortex1.24e-1517
occipital lobe5.37e-1410
visual cortex5.37e-1410
neocortex5.37e-1410
tube1.17e-09114
basal ganglion1.24e-098
nuclear complex of neuraxis1.24e-098
aggregate regional part of brain1.24e-098
collection of basal ganglia1.24e-098
cerebral subcortex1.24e-098
posterior neural tube6.57e-0912
chordal neural plate6.57e-0912
anatomical conduit3.18e-08122
spinal cord1.52e-076
dorsal region element1.52e-076
dorsum1.52e-076
organ system subdivision2.45e-07194
regional part of spinal cord6.80e-075
gray matter of spinal cord6.80e-075
autonomic nervous system8.89e-079







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