FFCP PHASE1:Mm9::chr2:4638871..4638939,+: Difference between revisions
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|id=chr2:4638871..4638939,+ | |id=chr2:4638871..4638939,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.19e-12!43;UBERON:0005177!5.20e-11!85;UBERON:0009569!3.13e-10!66;UBERON:0000344!1.29e-09!15;UBERON:0004119!2.10e-09!130;UBERON:0000925!2.10e-09!130;UBERON:0006595!2.10e-09!130;UBERON:0001007!3.61e-09!128;UBERON:0001555!3.61e-09!128;UBERON:0007026!3.61e-09!128;UBERON:0005409!5.62e-09!59;UBERON:0001242!7.80e-09!13;UBERON:0000060!7.80e-09!13;UBERON:0001262!7.80e-09!13;UBERON:0004786!7.80e-09!13;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126;UBERON:0005157!2.21e-08!27;UBERON:0005153!6.75e-08!17;UBERON:0002048!7.89e-08!14;UBERON:0000117!7.89e-08!14;UBERON:0000171!7.89e-08!14;UBERON:0000170!7.89e-08!14;UBERON:0005597!7.89e-08!14;UBERON:0000118!7.89e-08!14;UBERON:0000466!8.07e-08!79;UBERON:0002100!1.00e-07!98;UBERON:0000485!7.23e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!2.19e-12!43;UBERON:0005177!5.20e-11!85;UBERON:0009569!3.13e-10!66;UBERON:0000344!1.29e-09!15;UBERON:0004119!2.10e-09!130;UBERON:0000925!2.10e-09!130;UBERON:0006595!2.10e-09!130;UBERON:0001007!3.61e-09!128;UBERON:0001555!3.61e-09!128;UBERON:0007026!3.61e-09!128;UBERON:0005409!5.62e-09!59;UBERON:0001242!7.80e-09!13;UBERON:0000060!7.80e-09!13;UBERON:0001262!7.80e-09!13;UBERON:0004786!7.80e-09!13;UBERON:0004921!1.60e-08!126;UBERON:0004185!1.60e-08!126;UBERON:0005157!2.21e-08!27;UBERON:0005153!6.75e-08!17;UBERON:0002048!7.89e-08!14;UBERON:0000117!7.89e-08!14;UBERON:0000171!7.89e-08!14;UBERON:0000170!7.89e-08!14;UBERON:0005597!7.89e-08!14;UBERON:0000118!7.89e-08!14;UBERON:0000466!8.07e-08!79;UBERON:0002100!1.00e-07!98;UBERON:0000485!7.23e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.49e-13,31;UBERON:0005177,6.93e-11,79;UBERON:0009569,5.40e-10,66;UBERON:0000344,6.64e-10,15;UBERON:0001242,4.27e-09,13;UBERON:0001262,4.27e-09,13;UBERON:0004786,4.27e-09,13;UBERON:0004119,3.01e-08,118;UBERON:0000925,3.01e-08,118;UBERON:0006595,3.01e-08,118;UBERON:0005409,3.40e-08,47;UBERON:0005153,3.99e-08,17;UBERON:0002048,4.69e-08,14;UBERON:0000117,4.69e-08,14;UBERON:0000171,4.69e-08,14;UBERON:0000170,4.69e-08,14;UBERON:0005597,4.69e-08,14;UBERON:0000118,4.69e-08,14;UBERON:0001007,5.02e-08,116;UBERON:0001555,5.02e-08,116;UBERON:0007026,5.02e-08,116;UBERON:0005157,1.14e-07,20;UBERON:0004921,2.08e-07,114;UBERON:0000485,4.65e-07,11;UBERON:0002100,6.28e-07,90;UBERON:0005178,8.26e-07,17;UBERON:0005181,8.26e-07,17;UBERON:0002224,8.26e-07,17;UBERON:0000915,8.26e-07,17;UBERON:0008947,8.26e-07,17;UBERON:0003258,8.26e-07,17 | |||
|phase1_expression=4.48416771893423,33.5016391333787,30.4849490390989,32.9685990324445,48.0859900748493,17.2915650069246,14.9512089981136,0,0.281577444303333,0.468129052643987,0.171217968225505,0.159544317990673,0,0,0.333109761815663,0.202475267389826,0,0,0,0,4.93251082876205,0,0,6.71968175732308,7.57050627521661,22.9692785646008,21.1073378117947,22.8399506647042,25.8431850460668,37.3004592044698,13.9690221712842,0,0,0,6.06588401477677,6.4831511689812,8.77928231928187,0.418531630736908,0,0,0,0,0,0.125896817975577,0.101376931219515,0.183546752161682,0,0,0.219686182734472,0.777719596297134,0.699932108126813,0,0,0,0,1.80081605225163,0.85960031981627,0.515672092277442,0.606949382578793,2.11596391708813,1.26766280701236,0,0,0,0,0,0.299600110518405,0.768436610643109,0.829516898467821,1.35005938331691,1.47227472945967,2.85650984403804,0.662605622854841,1.22490799214954,0.575072826109418,0,0,1.27687338085188,1.38245879930619,0.659431438650969,1.09785172322892,1.04182674111352,1.11673199600552,1.68828783009504,2.13917546887534,3.24091444021034,3.13217697758026,3.72798891650601,1.4387976733305,1.13357340160178,5.2175607966302,2.58127163094416,4.75979933595425,6.47643829965381,3.24888208723835,8.96053774194671,4.63466586434781,0,0,0,5.0703631119605,0,0,0,1.73192832808971,3.04031838570118,1.01104889002957,9.36307813696292,0,4.75014845007439,1.90833859442749,3.65358573974569,2.7673859670727,3.46662073271032,9.52468527799209,7.1629957057915,15.8204779349999,3.61498392299779,0,0.647067399789637,0.883366073841574,1.93950101254089,0,0.878342391034642,0.83778682725382,15.0719662573069,0.239630249011841,0,0.635351135365324,2.09706895166752,1.83000241127451,0.753926112677186,0.869121600961382,1.79000820131231,1.0389402227978,0.648965052271031,2.13862664085664,2.36373244159177,5.30717792710717,7.15502310014011,1.56144531555244,1.60931473103431,2.16074555766419,2.86339153887859,4.35433594568498,5.50888997224854,3.84177070694888,5.95017752699736,0.215567992932842,0.567318240503458,0.703804496655795,1.7535658594206,1.39023624612799,0.696504333044333,1.02891068203972,1.79130840136644,0,0,0.284163499395593,0.621377317606506,0.469052119962192,1.2604344302271,1.89395788468168,1.18058539048442,1.3884040159864,1.86027155800326,1.87791380979733,4.43708300995244,5.10135534731789,3.94001913789829,4.9451973822972,3.50879969820798,4.39100230582101,6.30770168173747,1.47202963994889,1.13195073617213,8.92130714056255,8.46241813323342,0.426576501070468,2.32236671860439,3.09281907173024,4.43703754171354,5.55945109612176,6.84812254005213,9.49058123089023,7.24675400785648,8.29406189040889,8.35617182572834,8.38345574612217,15.2799299471218,9.94235029423593,9.16049856970089,0.948339504765408,3.88444942873078,5.63538678365402,1.4255592949172,2.90928730751439,5.96154469067708,8.03104021478068,8.85660887877613,8.00693511991011,9.37818445805684,6.52195779591728,0.667380422864376,1.76903095601883,2.9232074610031,2.84004169943904,1.20588579876208,3.31013607315846,3.74004978686054,5.83686816390127,3.84385978463314,12.9391385874619,6.69853705803306,9.98520553966594,8.84026072814891,6.09951205974501,9.64887042726734,20.6923572986597,2.08440552947533,4.72598431681875,4.41337223015489,7.04070744865506,16.0806007144143,21.4239276797412,34.928922966546,16.3940549870439,16.8313164133069,17.0616602463511,20.8106409688987,15.7143333497965,21.5527097286452,0,0,4.91764273019036,4.13905119457099,1.60550589987792,3.28192722458169,0,2.01976741763498,1.57754109708128,3.90438744296638,2.80050417052639,2.62865677747807,2.00518806674155,2.54768877709949,2.42886421004937,2.92255857911312,4.74345333535828,4.4984984299053,3.83238230062325,0.890328018336276,3.25773918707152,3.79431282836832,1.32745138339963,2.42780636154981,1.209294227859,1.50884063804718,2.06711325016541,3.99665692327106,6.20227903603731,3.99887102425256,3.92147116223193,4.74055136903724,7.37930260024991,4.12542172992747,4.42571487479924,1.62054984628179,0.776152102696527,2.57204442037911,2.6601035046341,3.92411398724555,2.46823530903181,4.26250928760439,2.11204537257339,4.87213762986786,2.20528398054962,1.48397627647332,2.9063596805263,1.68876189798836,0.835606408021955,1.31312719796049,8.16146342563582,1.8542530201051,0.170870880797853,0.82554747185289,0.370389054739423,0.376736914009382,0.136694227721025,0.457556346413045,1.86976272993241,2.79902904647316,3.86959926652387,3.81868247206045,0.474503990371703,2.84647253977588,2.16010681643603,3.13632444021703,2.83871332870031,2.96701562046606,5.04186079924549,4.18809507174447,3.11075935900303,5.59205381778233,0,3.43888055901151,1.82004339502807,3.50012139019286,2.71235629303235,2.53434188236167,4.81164678447591,5.85919731797776,1.57289016638566,0.966336483304024,0.576060012515731,0.316011120628178,1.21635129174099,1.1298205288131,0.649604114888975,0.358053391334963,0.596044064343795,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.302478555410522,0.292373642219257,0.288635524920988,0.584384510907845,1.13365191807606,1.10992976687032,1.16628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| ||
|short_description=p1@Bend7 | |short_description=p1@Bend7 | ||
}} | }} |
Revision as of 00:35, 14 November 2012
Short description: | p1@Bend7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Bend7_5end |
Coexpression cluster: | MCL_coexpression_mm9:1331 |
Association with transcript: | 0bp_to_ENSMUST00000115022, ENSMUST00000133082, NM_001190400, NM_178663, uc008iey.2, uc008iez.2, uc008ifa.2_5end |
EntrezGene: | Bend7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 6.49e-13 | 31 |
trunk region element | 6.93e-11 | 79 |
subdivision of trunk | 5.40e-10 | 66 |
mucosa | 6.64e-10 | 15 |
intestinal mucosa | 4.27e-09 | 13 |
wall of intestine | 4.27e-09 | 13 |
gastrointestinal system mucosa | 4.27e-09 | 13 |
endoderm-derived structure | 3.01e-08 | 118 |
endoderm | 3.01e-08 | 118 |
presumptive endoderm | 3.01e-08 | 118 |
gastrointestinal system | 3.40e-08 | 47 |
epithelial bud | 3.99e-08 | 17 |
lung | 4.69e-08 | 14 |
respiratory tube | 4.69e-08 | 14 |
respiration organ | 4.69e-08 | 14 |
pair of lungs | 4.69e-08 | 14 |
lung primordium | 4.69e-08 | 14 |
lung bud | 4.69e-08 | 14 |
digestive system | 5.02e-08 | 116 |
digestive tract | 5.02e-08 | 116 |
primitive gut | 5.02e-08 | 116 |
epithelial fold | 1.14e-07 | 20 |
subdivision of digestive tract | 2.08e-07 | 114 |
simple columnar epithelium | 4.65e-07 | 11 |
trunk | 6.28e-07 | 90 |
thoracic cavity element | 8.26e-07 | 17 |
thoracic segment organ | 8.26e-07 | 17 |
thoracic cavity | 8.26e-07 | 17 |
thoracic segment of trunk | 8.26e-07 | 17 |
respiratory primordium | 8.26e-07 | 17 |
endoderm of foregut | 8.26e-07 | 17 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.