FFCP PHASE1:Mm9::chr17:27693746..27693759,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 8: | Line 8: | ||
|id=chr17:27693746..27693759,+ | |id=chr17:27693746..27693759,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.91e-07!59;UBERON:0000010!3.72e-07!11 | |ontology_enrichment_uberon=UBERON:0005409!2.91e-07!59;UBERON:0000010!3.72e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.35e-10,31;UBERON:0005409,5.81e-10,47;UBERON:0000010,4.05e-08,11 | |||
|phase1_expression=0.640595388419176,1.74487703819681,1.36499771816861,0.30246421130683,0,6.88305014838748,6.54115393667472,0.258246646883153,0.563154888606667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,2.6648780945253,2.02475267389826,2.09868563438444,0.157731082679119,0,0.42438965179803,0.255129870453209,1.29078236561151,0.522399578277871,3.67982572424835,3.67054849707472,1.72269589234506,2.58457197695445,4.74036711908956,1.90023419456374,2.52030129759931,5.98672378769323,3.81018404075779,3.69038872550742,15.8481681015439,13.2871745085586,13.7974755647549,13.271008157054,0,0,0,0,0,0.485510353031154,1.51076181570693,1.92616169317078,2.56965453026354,1.56478268869608,1.96222640742402,0.219686182734472,0.777719596297134,2.93971485413261,4.31257693094915,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0,0.809265843438391,1.05798195854407,1.90149421051854,11.8595586224196,0.889294796111139,1.3498495759221,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,1.8664130215526,1.89008313664367,1.68259969081106,1.42825492201902,0.883474163806454,4.04219637409348,4.50473713785711,2.75765635983006,0,1.0214987046815,0.921639199537461,1.71452174049252,1.28082701043374,0,0.279182999001381,1.12552522006336,1.22238598221448,0.883885756421003,0.996601765593721,1.4911955666024,40.2863348532539,34.536202968801,1.15945795480671,0,8.83962733820076,0,0,0.448026887097336,0.280888840263504,1.1930122580464,0.519572009205738,1.7666978725517,0.281686839553361,0,0,0,11.2575341325831,11.4011939463794,8.59391556525132,0.45673551887624,0,0.890652834388949,3.64319186208885,0.304465478312141,0.691846491768175,1.05505848386836,1.88141931417128,0.251333182659351,0.247194967734374,0.289198713839823,0.884610551949874,1.13236794963186,1.10420759230197,1.45462575940567,0,1.46390398505774,1.04723353406728,3.0654846625031,1.31796636956512,0.599902730993408,1.01656181658452,1.79748767285787,0,0.753926112677186,0,0.511430914660661,1.24672826735736,0.324482526135515,0.407357455401265,0.248813941220186,0.758168275301024,1.68353484709179,2.34216797332867,1.83921683546778,3.06105620669094,3.91832526372859,11.7703143531797,9.22418786050918,8.80796210861451,0.776110112217047,4.31135985865684,2.83659120251729,1.75951124163949,2.6303487891309,0.834141747676794,0,0,1.19420560091096,1.40442637462647,1.54408744268829,0.852490498186778,4.34964122324554,3.04883877975425,2.34080679899319,3.31442629819294,1.77087808572663,1.85120535464854,1.62773761325285,1.07309360559848,1.05088808130453,1.15191894939436,0.985004784474571,0.810688095458557,1.31579988682799,0.219550115291051,0.402619256281115,0,0.102904612379284,0,8.99131926656051,3.19932375802851,3.0190767341857,4.12375876230699,2.8235693447268,2.89091456998331,2.28270751335071,1.89811624617805,2.14108641141214,2.5133520880027,2.58643413653496,2.72949721966768,5.39291645192533,2.16138049874694,2.19055400579804,2.84501851429623,1.37098215131675,0,0.610953983535943,0.775809948670503,0.98190147846446,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,1.37591296579242,1.57403478669398,0.811440485554012,0.482354319504834,0.763877555344259,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,2.4633883530163,2.44447464663039,1.86719594352707,1.64283173801951,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.80275294993896,1.05490517932983,6.72133276044369,0.252470927204373,7.2566890465739,4.68526493155966,2.58508077279359,2.86762557543062,4.67877215573028,3.67999490025482,6.8817819284732,5.26060544240361,3.95287777946523,1.28528526568723,0.851640511249612,0.712262414669021,0.81443479676788,0.659880491890142,0,1.69946445308487,4.83717691143602,2.26326095707078,2.06711325016541,1.22974059177571,1.03371317267288,0.727067458955011,0.356497378384721,0.948110273807448,0,0,1.70219802876894,2.88097750450096,7.37344497561701,3.42939256050548,1.59606210278046,2.14042581122485,0.822745103010605,0.913394847343798,0.938686832254841,0,0.882113592219848,2.14352128823924,0.645857706783622,1.99032652262914,2.50681922406587,4.10352249362653,4.66369338607761,0.927126510052548,1.02522528478712,1.44470807574256,1.48155621895769,2.0720530270516,2.05041341581538,1.37266903923914,2.54967644990783,1.39951452323658,2.07299960706636,0.954670618015114,5.06137589729817,2.23651413839534,2.59212817972323,1.88179466413022,0.87345025498471,0.944050424693745,2.72756403893609,1.04702376793612,0.388844919875379,0.621339313086926,0,0.897099276263873,0.66183396182839,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,1.21635129174099,0.410843828659309,0.389762468933385,0.358053391334963,0.596044064343795,0.240390899039938,0.443068581523732,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0,0.906921534460845,0.665957860122194,0.717710852875806,0.671538465456314,1.35232715822533,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,2.2661816921691,0,0.900642406448441,1.81256963593682,0,2.38710899443606,3.99024873401031,1.02440163452481,0.972426868273176,1.04806581313991,1.2869045591501,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0,0.377252682772152,0.655490552289177,0.768301828858431,0.746661096422973,2.38146845641537,0.811190281613988,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,1.26921911837515,0.914639864363863,0.789209134313529,0.814824683075171,0.561142271657738,1.06771516311757,0.689531376628944,0,0.619747364743864,0.578719832943424,1.99848462350357,1.16965804222704,1.28922632428979,0.382576664137687,1.76473135295612,0.231867835620421 | |phase1_expression=0.640595388419176,1.74487703819681,1.36499771816861,0.30246421130683,0,6.88305014838748,6.54115393667472,0.258246646883153,0.563154888606667,0.234064526321993,0,0.0797721589953364,0,0.0874204024189974,2.6648780945253,2.02475267389826,2.09868563438444,0.157731082679119,0,0.42438965179803,0.255129870453209,1.29078236561151,0.522399578277871,3.67982572424835,3.67054849707472,1.72269589234506,2.58457197695445,4.74036711908956,1.90023419456374,2.52030129759931,5.98672378769323,3.81018404075779,3.69038872550742,15.8481681015439,13.2871745085586,13.7974755647549,13.271008157054,0,0,0,0,0,0.485510353031154,1.51076181570693,1.92616169317078,2.56965453026354,1.56478268869608,1.96222640742402,0.219686182734472,0.777719596297134,2.93971485413261,4.31257693094915,0.167782606057736,0.725362142011344,0,0.771778308107841,0,0,0.809265843438391,1.05798195854407,1.90149421051854,11.8595586224196,0.889294796111139,1.3498495759221,1.97773272513395,2.1314403448383,1.19840044207362,0.768436610643109,1.8664130215526,1.89008313664367,1.68259969081106,1.42825492201902,0.883474163806454,4.04219637409348,4.50473713785711,2.75765635983006,0,1.0214987046815,0.921639199537461,1.71452174049252,1.28082701043374,0,0.279182999001381,1.12552522006336,1.22238598221448,0.883885756421003,0.996601765593721,1.4911955666024,40.2863348532539,34.536202968801,1.15945795480671,0,8.83962733820076,0,0,0.448026887097336,0.280888840263504,1.1930122580464,0.519572009205738,1.7666978725517,0.281686839553361,0,0,0,11.2575341325831,11.4011939463794,8.59391556525132,0.45673551887624,0,0.890652834388949,3.64319186208885,0.304465478312141,0.691846491768175,1.05505848386836,1.88141931417128,0.251333182659351,0.247194967734374,0.289198713839823,0.884610551949874,1.13236794963186,1.10420759230197,1.45462575940567,0,1.46390398505774,1.04723353406728,3.0654846625031,1.31796636956512,0.599902730993408,1.01656181658452,1.79748767285787,0,0.753926112677186,0,0.511430914660661,1.24672826735736,0.324482526135515,0.407357455401265,0.248813941220186,0.758168275301024,1.68353484709179,2.34216797332867,1.83921683546778,3.06105620669094,3.91832526372859,11.7703143531797,9.22418786050918,8.80796210861451,0.776110112217047,4.31135985865684,2.83659120251729,1.75951124163949,2.6303487891309,0.834141747676794,0,0,1.19420560091096,1.40442637462647,1.54408744268829,0.852490498186778,4.34964122324554,3.04883877975425,2.34080679899319,3.31442629819294,1.77087808572663,1.85120535464854,1.62773761325285,1.07309360559848,1.05088808130453,1.15191894939436,0.985004784474571,0.810688095458557,1.31579988682799,0.219550115291051,0.402619256281115,0,0.102904612379284,0,8.99131926656051,3.19932375802851,3.0190767341857,4.12375876230699,2.8235693447268,2.89091456998331,2.28270751335071,1.89811624617805,2.14108641141214,2.5133520880027,2.58643413653496,2.72949721966768,5.39291645192533,2.16138049874694,2.19055400579804,2.84501851429623,1.37098215131675,0,0.610953983535943,0.775809948670503,0.98190147846446,0.252946148497029,0.295220295959204,0.31399745568275,0.123397163921801,0,0.83422552858047,1.37591296579242,1.57403478669398,0.811440485554012,0.482354319504834,0.763877555344259,0,0.486405680325106,0.549122826376163,0,0.372140947668503,0.624075346229121,0.505157755894224,0.179397413521912,0.482443521363367,0.184753190166605,2.4633883530163,2.44447464663039,1.86719594352707,1.64283173801951,0.670025029767263,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.433947175744535,0,1.08781136763742,0.491764273019036,0,0.80275294993896,1.05490517932983,6.72133276044369,0.252470927204373,7.2566890465739,4.68526493155966,2.58508077279359,2.86762557543062,4.67877215573028,3.67999490025482,6.8817819284732,5.26060544240361,3.95287777946523,1.28528526568723,0.851640511249612,0.712262414669021,0.81443479676788,0.659880491890142,0,1.69946445308487,4.83717691143602,2.26326095707078,2.06711325016541,1.22974059177571,1.03371317267288,0.727067458955011,0.356497378384721,0.948110273807448,0,0,1.70219802876894,2.88097750450096,7.37344497561701,3.42939256050548,1.59606210278046,2.14042581122485,0.822745103010605,0.913394847343798,0.938686832254841,0,0.882113592219848,2.14352128823924,0.645857706783622,1.99032652262914,2.50681922406587,4.10352249362653,4.66369338607761,0.927126510052548,1.02522528478712,1.44470807574256,1.48155621895769,2.0720530270516,2.05041341581538,1.37266903923914,2.54967644990783,1.39951452323658,2.07299960706636,0.954670618015114,5.06137589729817,2.23651413839534,2.59212817972323,1.88179466413022,0.87345025498471,0.944050424693745,2.72756403893609,1.04702376793612,0.388844919875379,0.621339313086926,0,0.897099276263873,0.66183396182839,0.194451188344048,0.387479470433193,0.506868376472335,0.234714477291508,0.39061315453185,0.838874755405687,0.241584120826006,0.288030006257865,0.316011120628178,1.21635129174099,0.410843828659309,0.389762468933385,0.358053391334963,0.596044064343795,0.240390899039938,0.443068581523732,0.403865799792591,0.0762068066549998,0.100826185136841,0.292373642219257,0.384847366561318,0,0.906921534460845,0.665957860122194,0.717710852875806,0.671538465456314,1.35232715822533,0.375364950902364,0.36630324853453,0.643105137237198,0.501572104035363,0,0,0,0.343706364687375,0,2.2661816921691,0,0.900642406448441,1.81256963593682,0,2.38710899443606,3.99024873401031,1.02440163452481,0.972426868273176,1.04806581313991,1.2869045591501,0.44449345560323,0.206035057238894,1.28367683836726,0.505394423527595,0,0.377252682772152,0.655490552289177,0.768301828858431,0.746661096422973,2.38146845641537,0.811190281613988,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.476872379894642,0.581385666529314,0.282328141245992,1.26921911837515,0.914639864363863,0.789209134313529,0.814824683075171,0.561142271657738,1.06771516311757,0.689531376628944,0,0.619747364743864,0.578719832943424,1.99848462350357,1.16965804222704,1.28922632428979,0.382576664137687,1.76473135295612,0.231867835620421 | ||
|short_description=p6@Hmga1-rs1,p7@Hmga1 | |short_description=p6@Hmga1-rs1,p7@Hmga1 | ||
}} | }} | ||
Revision as of 00:13, 14 November 2012
| Short description: | p6@Hmga1-rs1, p7@Hmga1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_6_at_Hmga1-rs1_5end, CAGE_peak_7_at_Hmga1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1706 |
| Association with transcript: | 133bp_to_ENSMUST00000117254, ENSMUST00000118570_5end |
| EntrezGene: | 111241,15361 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| intestine | 5.35e-10 | 31 |
| gastrointestinal system | 5.81e-10 | 47 |
| peripheral nervous system | 4.05e-08 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
