FFCP PHASE1:Mm9::chr9:108041696..108041708,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr9:108041696..108041708,- | |id=chr9:108041696..108041708,- | ||
|ontology_enrichment_celltype=CL:0000117!3.20e-17!23;CL:0000337!3.20e-17!23;CL:0000540!8.39e-12!33;CL:0000047!8.39e-12!33;CL:0000031!8.39e-12!33;CL:0000404!8.39e-12!33;CL:0000393!3.60e-09!39;CL:0000211!3.60e-09!39;CL:0002319!7.63e-08!43;CL:0000221!1.49e-07!44;CL:0000133!1.49e-07!44 | |ontology_enrichment_celltype=CL:0000117!3.20e-17!23;CL:0000337!3.20e-17!23;CL:0000540!8.39e-12!33;CL:0000047!8.39e-12!33;CL:0000031!8.39e-12!33;CL:0000404!8.39e-12!33;CL:0000393!3.60e-09!39;CL:0000211!3.60e-09!39;CL:0002319!7.63e-08!43;CL:0000221!1.49e-07!44;CL:0000133!1.49e-07!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.06e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.36e-34!52;UBERON:0005068!5.36e-34!52;UBERON:0006241!5.36e-34!52;UBERON:0007135!5.36e-34!52;UBERON:0001017!5.53e-33!73;UBERON:0005743!5.53e-33!73;UBERON:0002346!1.95e-32!71;UBERON:0003075!1.95e-32!71;UBERON:0007284!1.95e-32!71;UBERON:0000955!5.79e-32!50;UBERON:0006238!5.79e-32!50;UBERON:0000073!9.42e-32!75;UBERON:0001016!9.42e-32!75;UBERON:0002616!1.45e-30!49;UBERON:0000033!2.82e-29!63;UBERON:0004121!3.16e-27!102;UBERON:0000924!3.16e-27!102;UBERON:0006601!3.16e-27!102;UBERON:0002020!8.41e-25!34;UBERON:0003056!7.08e-24!49;UBERON:0003080!9.22e-24!40;UBERON:0002780!1.11e-22!39;UBERON:0001890!1.11e-22!39;UBERON:0006240!1.11e-22!39;UBERON:0007811!2.44e-19!86;UBERON:0002791!1.46e-18!29;UBERON:0003528!1.46e-18!29;UBERON:0001893!1.46e-18!29;UBERON:0000153!1.08e-16!94;UBERON:0002021!2.63e-16!10;UBERON:0000411!2.63e-16!10;UBERON:0001950!2.63e-16!10;UBERON:0000956!1.20e-15!21;UBERON:0001869!1.20e-15!21;UBERON:0000203!1.20e-15!21;UBERON:0002619!1.14e-13!17;UBERON:0003076!1.72e-10!12;UBERON:0003057!1.72e-10!12;UBERON:0000025!3.22e-10!114;UBERON:0004111!7.30e-09!122;UBERON:0002240!9.53e-09!6;UBERON:0005174!9.53e-09!6;UBERON:0001137!9.53e-09!6;UBERON:0001948!6.09e-08!5;UBERON:0002315!6.09e-08!5;UBERON:0000475!7.29e-07!200 | |ontology_enrichment_uberon=UBERON:0001049!5.36e-34!52;UBERON:0005068!5.36e-34!52;UBERON:0006241!5.36e-34!52;UBERON:0007135!5.36e-34!52;UBERON:0001017!5.53e-33!73;UBERON:0005743!5.53e-33!73;UBERON:0002346!1.95e-32!71;UBERON:0003075!1.95e-32!71;UBERON:0007284!1.95e-32!71;UBERON:0000955!5.79e-32!50;UBERON:0006238!5.79e-32!50;UBERON:0000073!9.42e-32!75;UBERON:0001016!9.42e-32!75;UBERON:0002616!1.45e-30!49;UBERON:0000033!2.82e-29!63;UBERON:0004121!3.16e-27!102;UBERON:0000924!3.16e-27!102;UBERON:0006601!3.16e-27!102;UBERON:0002020!8.41e-25!34;UBERON:0003056!7.08e-24!49;UBERON:0003080!9.22e-24!40;UBERON:0002780!1.11e-22!39;UBERON:0001890!1.11e-22!39;UBERON:0006240!1.11e-22!39;UBERON:0007811!2.44e-19!86;UBERON:0002791!1.46e-18!29;UBERON:0003528!1.46e-18!29;UBERON:0001893!1.46e-18!29;UBERON:0000153!1.08e-16!94;UBERON:0002021!2.63e-16!10;UBERON:0000411!2.63e-16!10;UBERON:0001950!2.63e-16!10;UBERON:0000956!1.20e-15!21;UBERON:0001869!1.20e-15!21;UBERON:0000203!1.20e-15!21;UBERON:0002619!1.14e-13!17;UBERON:0003076!1.72e-10!12;UBERON:0003057!1.72e-10!12;UBERON:0000025!3.22e-10!114;UBERON:0004111!7.30e-09!122;UBERON:0002240!9.53e-09!6;UBERON:0005174!9.53e-09!6;UBERON:0001137!9.53e-09!6;UBERON:0001948!6.09e-08!5;UBERON:0002315!6.09e-08!5;UBERON:0000475!7.29e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.89e-47,10;UBERON:0000411,2.89e-47,10;UBERON:0001950,2.89e-47,10;UBERON:0002619,1.82e-27,17;UBERON:0000956,4.60e-22,21;UBERON:0001869,4.60e-22,21;UBERON:0000203,4.60e-22,21;UBERON:0003528,2.15e-19,29;UBERON:0002791,2.15e-19,29;UBERON:0001893,2.15e-19,29;UBERON:0000073,4.56e-17,54;UBERON:0000955,7.17e-17,47;UBERON:0006238,7.17e-17,47;UBERON:0001017,1.17e-16,73;UBERON:0002020,2.24e-16,34;UBERON:0001016,3.58e-16,75;UBERON:0002616,1.82e-14,46;UBERON:0002780,3.97e-14,39;UBERON:0001890,3.97e-14,39;UBERON:0006240,3.97e-14,39;UBERON:0003080,9.58e-14,40;UBERON:0001049,1.22e-12,52;UBERON:0005068,1.22e-12,52;UBERON:0006241,1.22e-12,52;UBERON:0007135,1.22e-12,52;UBERON:0004121,2.01e-12,95;UBERON:0000924,2.01e-12,95;UBERON:0006601,2.01e-12,95;UBERON:0003056,5.33e-11,49;UBERON:0002346,5.19e-10,64;UBERON:0003075,5.19e-10,64;UBERON:0007284,5.19e-10,64;UBERON:0010371,1.33e-08,73;UBERON:0004684,2.06e-08,3;UBERON:0002275,2.06e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,1.0752457327937,0.263772575460388,0.365950574409639,0,1.3959149950069,0,0.45839474333043,0.883885756421003,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,8.3778682725382,0,0,0,0,0.299581278809645,0,0.251308704225729,0.695297280769106,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,2.29158205375759,1.3748254587495,2.05524755931193,3.0215755895588,4.05013500139084,2.70192721934532,3.17199686288943,1.03552062350364,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,2.11596391708813,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,0.662605622854841,0.244981598429908,0.383381884072945,0,1.10115880999389,0.638436690425939,1.0752457327937,0.263772575460388,0.365950574409639,0,1.3959149950069,0,0.45839474333043,0.883885756421003,0.569486723196412,0.559198337475902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,8.3778682725382,0,0,0,0,0.299581278809645,0,0.251308704225729,0.695297280769106,0.511430914660661,0.20778804455956,0.162241263067758,0,0,0,0,0,0.229902104433473,0,0,0.0680364991513279,0.2562274405697,0,0.258703370739016,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0.214337035031592,0,0,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,0.920650473014354,2.29158205375759,1.3748254587495,2.05524755931193,3.0215755895588,4.05013500139084,2.70192721934532,3.17199686288943,1.03552062350364,0,0.399024873401031,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p@chr9:108041696..108041708,- | |short_description=p@chr9:108041696..108041708,- | ||
}} | }} |
Revision as of 21:38, 13 November 2012
Short description: | p@chr9:108041696..108041708, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:108041696..108041708, - |
Coexpression cluster: | MCL_coexpression_mm9:168 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.06e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.89e-47 | 10 |
visual cortex | 2.89e-47 | 10 |
neocortex | 2.89e-47 | 10 |
regional part of cerebral cortex | 1.82e-27 | 17 |
cerebral cortex | 4.60e-22 | 21 |
cerebral hemisphere | 4.60e-22 | 21 |
pallium | 4.60e-22 | 21 |
brain grey matter | 2.15e-19 | 29 |
regional part of telencephalon | 2.15e-19 | 29 |
telencephalon | 2.15e-19 | 29 |
regional part of nervous system | 4.56e-17 | 54 |
brain | 7.17e-17 | 47 |
future brain | 7.17e-17 | 47 |
central nervous system | 1.17e-16 | 73 |
gray matter | 2.24e-16 | 34 |
nervous system | 3.58e-16 | 75 |
regional part of brain | 1.82e-14 | 46 |
regional part of forebrain | 3.97e-14 | 39 |
forebrain | 3.97e-14 | 39 |
future forebrain | 3.97e-14 | 39 |
anterior neural tube | 9.58e-14 | 40 |
neural tube | 1.22e-12 | 52 |
neural rod | 1.22e-12 | 52 |
future spinal cord | 1.22e-12 | 52 |
neural keel | 1.22e-12 | 52 |
ectoderm-derived structure | 2.01e-12 | 95 |
ectoderm | 2.01e-12 | 95 |
presumptive ectoderm | 2.01e-12 | 95 |
pre-chordal neural plate | 5.33e-11 | 49 |
neurectoderm | 5.19e-10 | 64 |
neural plate | 5.19e-10 | 64 |
presumptive neural plate | 5.19e-10 | 64 |
ecto-epithelium | 1.33e-08 | 73 |
raphe nuclei | 2.06e-08 | 3 |
reticular formation | 2.06e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.