FFCP PHASE1:Mm9::chr19:12707846..12707859,+: Difference between revisions
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|id=chr19:12707846..12707859,+ | |id=chr19:12707846..12707859,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.27e-13,5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.75e-21!22;UBERON:0007499!2.75e-21!22;UBERON:0006925!2.75e-21!22;UBERON:0009497!2.75e-21!22;UBERON:0000015!2.75e-21!22;UBERON:0002423!2.75e-21!22;UBERON:0006235!2.75e-21!22;UBERON:0008835!2.75e-21!22;UBERON:0003894!2.75e-21!22;UBERON:0004161!2.75e-21!22;UBERON:0008836!2.75e-21!22;UBERON:0005172!8.64e-21!49;UBERON:0005173!8.64e-21!49;UBERON:0002417!8.64e-21!49;UBERON:0000916!8.64e-21!49;UBERON:0009854!3.07e-20!23;UBERON:0009856!3.07e-20!23;UBERON:0002365!2.14e-18!25;UBERON:0002330!2.14e-18!25;UBERON:0009569!5.62e-16!66;UBERON:0005177!1.04e-12!85;UBERON:0002100!2.11e-10!98;UBERON:0002113!1.73e-09!14;UBERON:0003918!1.73e-09!14;UBERON:0005095!1.73e-09!14;UBERON:0007687!1.73e-09!14;UBERON:0003914!1.70e-08!47;UBERON:0005256!1.70e-08!47;UBERON:0006554!3.50e-08!16;UBERON:0000489!9.70e-08!21;UBERON:0001008!1.21e-07!17;UBERON:0005057!1.28e-07!51;UBERON:0003929!7.12e-07!55 | |ontology_enrichment_uberon=UBERON:0002107!2.75e-21!22;UBERON:0007499!2.75e-21!22;UBERON:0006925!2.75e-21!22;UBERON:0009497!2.75e-21!22;UBERON:0000015!2.75e-21!22;UBERON:0002423!2.75e-21!22;UBERON:0006235!2.75e-21!22;UBERON:0008835!2.75e-21!22;UBERON:0003894!2.75e-21!22;UBERON:0004161!2.75e-21!22;UBERON:0008836!2.75e-21!22;UBERON:0005172!8.64e-21!49;UBERON:0005173!8.64e-21!49;UBERON:0002417!8.64e-21!49;UBERON:0000916!8.64e-21!49;UBERON:0009854!3.07e-20!23;UBERON:0009856!3.07e-20!23;UBERON:0002365!2.14e-18!25;UBERON:0002330!2.14e-18!25;UBERON:0009569!5.62e-16!66;UBERON:0005177!1.04e-12!85;UBERON:0002100!2.11e-10!98;UBERON:0002113!1.73e-09!14;UBERON:0003918!1.73e-09!14;UBERON:0005095!1.73e-09!14;UBERON:0007687!1.73e-09!14;UBERON:0003914!1.70e-08!47;UBERON:0005256!1.70e-08!47;UBERON:0006554!3.50e-08!16;UBERON:0000489!9.70e-08!21;UBERON:0001008!1.21e-07!17;UBERON:0005057!1.28e-07!51;UBERON:0003929!7.12e-07!55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.92e-26,22;UBERON:0007499,3.92e-26,22;UBERON:0006925,3.92e-26,22;UBERON:0009497,3.92e-26,22;UBERON:0000015,3.92e-26,22;UBERON:0002423,3.92e-26,22;UBERON:0006235,3.92e-26,22;UBERON:0008835,3.92e-26,22;UBERON:0003894,3.92e-26,22;UBERON:0004161,3.92e-26,22;UBERON:0008836,3.92e-26,22;UBERON:0009854,5.68e-25,23;UBERON:0009856,5.68e-25,23;UBERON:0002365,6.31e-23,25;UBERON:0002330,6.31e-23,25;UBERON:0005172,1.09e-20,49;UBERON:0005173,1.09e-20,49;UBERON:0002417,1.09e-20,49;UBERON:0000916,1.09e-20,49;UBERON:0003104,1.89e-16,61;UBERON:0009142,1.89e-16,61;UBERON:0009569,3.89e-15,66;UBERON:0005177,1.72e-12,79;UBERON:0005256,1.96e-12,45;UBERON:0003914,7.12e-12,47;UBERON:0002100,7.64e-11,90;UBERON:0003929,4.93e-10,55;UBERON:0002368,3.95e-09,60;UBERON:0002530,2.30e-08,65;UBERON:0000490,3.17e-08,66;UBERON:0005911,7.87e-08,69;UBERON:0000949,1.81e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.442655759869801,3.09981310757165,1.09899109488962,4.44229790118482,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,2.87536413054709,2.60498663367952,0.936113019343682,2.27320990152401,2.33216637578486,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860423876981386,0,1.07940638327563,1.29955283489534,2.68816132258401,0.702222100658759,0,0,0,0,0,0,0,0.432982082022428,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0.49095073923223,0.442655759869801,3.09981310757165,1.09899109488962,4.44229790118482,1.1858105083486,0,0,0,0,0,0,0,0.162135226775035,0.823684239564244,2.87536413054709,2.60498663367952,0.936113019343682,2.27320990152401,2.33216637578486,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0.330613822901344,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429742108096597,0,0,0 | ||
|short_description=p4@Glyat | |short_description=p4@Glyat | ||
}} | }} |
Revision as of 19:06, 13 November 2012
Short description: | p4@Glyat |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Glyat_5end |
Coexpression cluster: | MCL_coexpression_mm9:179 |
Association with transcript: | 48bp_to_ENSMUST00000044976, NM_145935, uc008guh.1, uc008gui.1_5end |
EntrezGene: | Glyat |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.27e-13 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.92e-26 | 22 |
epithelial sac | 3.92e-26 | 22 |
digestive gland | 3.92e-26 | 22 |
epithelium of foregut-midgut junction | 3.92e-26 | 22 |
anatomical boundary | 3.92e-26 | 22 |
hepatobiliary system | 3.92e-26 | 22 |
foregut-midgut junction | 3.92e-26 | 22 |
hepatic diverticulum | 3.92e-26 | 22 |
liver primordium | 3.92e-26 | 22 |
septum transversum | 3.92e-26 | 22 |
liver bud | 3.92e-26 | 22 |
digestive tract diverticulum | 5.68e-25 | 23 |
sac | 5.68e-25 | 23 |
exocrine gland | 6.31e-23 | 25 |
exocrine system | 6.31e-23 | 25 |
abdomen element | 1.09e-20 | 49 |
abdominal segment element | 1.09e-20 | 49 |
abdominal segment of trunk | 1.09e-20 | 49 |
abdomen | 1.09e-20 | 49 |
mesenchyme | 1.89e-16 | 61 |
entire embryonic mesenchyme | 1.89e-16 | 61 |
subdivision of trunk | 3.89e-15 | 66 |
trunk region element | 1.72e-12 | 79 |
trunk mesenchyme | 1.96e-12 | 45 |
epithelial tube | 7.12e-12 | 47 |
trunk | 7.64e-11 | 90 |
gut epithelium | 4.93e-10 | 55 |
endocrine gland | 3.95e-09 | 60 |
gland | 2.30e-08 | 65 |
unilaminar epithelium | 3.17e-08 | 66 |
endo-epithelium | 7.87e-08 | 69 |
endocrine system | 1.81e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.