FFCP PHASE1:Mm9::chr11:88481015..88481025,+: Difference between revisions
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|id=chr11:88481015..88481025,+ | |id=chr11:88481015..88481025,+ | ||
|ontology_enrichment_celltype=CL:0000553!2.39e-18!6;CL:0000556!2.39e-18!6;CL:0002031!3.68e-15!25;CL:0000050!5.40e-12!9;CL:0000988!2.76e-11!32;CL:0002032!2.76e-11!32;CL:0000037!2.76e-11!32;CL:0000566!2.76e-11!32;CL:0000837!2.76e-11!32;CL:0000414!1.11e-09!11;CL:0002027!1.21e-09!3;CL:0002006!1.21e-09!3;CL:0002024!1.21e-09!3;CL:0000838!2.24e-08!12;CL:0000839!4.47e-08!13;CL:0000791!5.88e-08!9;CL:0000789!5.88e-08!9;CL:0002420!5.88e-08!9;CL:0002419!5.88e-08!9;CL:0000790!5.88e-08!9;CL:0000542!1.12e-07!13;CL:0000051!1.12e-07!13;CL:0002320!4.28e-07!46;CL:0000134!4.28e-07!46 | |ontology_enrichment_celltype=CL:0000553!2.39e-18!6;CL:0000556!2.39e-18!6;CL:0002031!3.68e-15!25;CL:0000050!5.40e-12!9;CL:0000988!2.76e-11!32;CL:0002032!2.76e-11!32;CL:0000037!2.76e-11!32;CL:0000566!2.76e-11!32;CL:0000837!2.76e-11!32;CL:0000414!1.11e-09!11;CL:0002027!1.21e-09!3;CL:0002006!1.21e-09!3;CL:0002024!1.21e-09!3;CL:0000838!2.24e-08!12;CL:0000839!4.47e-08!13;CL:0000791!5.88e-08!9;CL:0000789!5.88e-08!9;CL:0002420!5.88e-08!9;CL:0002419!5.88e-08!9;CL:0000790!5.88e-08!9;CL:0000542!1.12e-07!13;CL:0000051!1.12e-07!13;CL:0002320!4.28e-07!46;CL:0000134!4.28e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,8.48e-27,6;CL:0000556,8.48e-27,6;CL:0000945,2.59e-18,1;CL:0000236,2.59e-18,1;CL:0000826,2.59e-18,1;CL:0000050,3.44e-18,9;CL:0000839,7.26e-13,13;CL:0002031,9.10e-12,25;CL:0000763,1.31e-10,16;CL:0000988,2.45e-09,32;CL:0002032,2.45e-09,32;CL:0000037,2.45e-09,32;CL:0000837,2.45e-09,32;CL:0000049,4.68e-09,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.09e-24!48;UBERON:0002390!7.67e-24!45;UBERON:0003061!7.67e-24!45;UBERON:0004177!1.84e-18!29;UBERON:0003081!1.90e-15!88;UBERON:0002405!1.96e-15!70;UBERON:0002370!2.93e-12!23;UBERON:0000974!2.93e-12!23;UBERON:0004807!2.93e-12!23;UBERON:0005058!2.93e-12!23;UBERON:0003351!2.93e-12!23;UBERON:0009113!2.93e-12!23;UBERON:0003295!2.93e-12!23;UBERON:0009722!2.93e-12!23;UBERON:0005562!2.93e-12!23;UBERON:0007690!2.93e-12!23;UBERON:0006562!1.16e-11!24;UBERON:0003408!1.16e-11!24;UBERON:0001557!1.16e-11!24;UBERON:0001042!1.16e-11!24;UBERON:0008814!1.16e-11!24;UBERON:0009145!1.16e-11!24;UBERON:0000072!3.88e-10!27;UBERON:0005057!3.86e-09!51;UBERON:0002106!4.62e-08!6;UBERON:0004457!4.62e-08!6;UBERON:0000042!4.62e-08!6;UBERON:0004854!4.62e-08!6;UBERON:0009034!4.62e-08!6;UBERON:0002095!4.62e-08!6;UBERON:0004782!4.62e-08!6;UBERON:0003281!4.62e-08!6;UBERON:0009664!4.62e-08!6;UBERON:0002296!4.62e-08!6;UBERON:0005602!4.62e-08!6;UBERON:0001179!4.62e-08!6;UBERON:0006293!4.62e-08!6;UBERON:0000063!2.34e-07!35;UBERON:0000065!3.20e-07!41;UBERON:0002384!4.28e-07!46;UBERON:0001004!5.37e-07!42 | |ontology_enrichment_uberon=UBERON:0002193!1.09e-24!48;UBERON:0002390!7.67e-24!45;UBERON:0003061!7.67e-24!45;UBERON:0004177!1.84e-18!29;UBERON:0003081!1.90e-15!88;UBERON:0002405!1.96e-15!70;UBERON:0002370!2.93e-12!23;UBERON:0000974!2.93e-12!23;UBERON:0004807!2.93e-12!23;UBERON:0005058!2.93e-12!23;UBERON:0003351!2.93e-12!23;UBERON:0009113!2.93e-12!23;UBERON:0003295!2.93e-12!23;UBERON:0009722!2.93e-12!23;UBERON:0005562!2.93e-12!23;UBERON:0007690!2.93e-12!23;UBERON:0006562!1.16e-11!24;UBERON:0003408!1.16e-11!24;UBERON:0001557!1.16e-11!24;UBERON:0001042!1.16e-11!24;UBERON:0008814!1.16e-11!24;UBERON:0009145!1.16e-11!24;UBERON:0000072!3.88e-10!27;UBERON:0005057!3.86e-09!51;UBERON:0002106!4.62e-08!6;UBERON:0004457!4.62e-08!6;UBERON:0000042!4.62e-08!6;UBERON:0004854!4.62e-08!6;UBERON:0009034!4.62e-08!6;UBERON:0002095!4.62e-08!6;UBERON:0004782!4.62e-08!6;UBERON:0003281!4.62e-08!6;UBERON:0009664!4.62e-08!6;UBERON:0002296!4.62e-08!6;UBERON:0005602!4.62e-08!6;UBERON:0001179!4.62e-08!6;UBERON:0006293!4.62e-08!6;UBERON:0000063!2.34e-07!35;UBERON:0000065!3.20e-07!41;UBERON:0002384!4.28e-07!46;UBERON:0001004!5.37e-07!42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000029,5.15e-19,1;UBERON:0001097,5.15e-19,1;UBERON:0003968,5.15e-19,1;UBERON:0001467,5.15e-19,1;UBERON:0002371,1.31e-10,16;UBERON:0001474,6.36e-08,22;UBERON:0004765,6.36e-08,22;UBERON:0001434,6.36e-08,22;UBERON:0002465,3.18e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.856089841127525,0,0.856003649656029,0,0.666219523631325,0.404950534779652,0.699561878128147,3.47008381894061,2.05671650408608,3.39511721438424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0.387369970324729,0.140788722151667,0,0.856089841127525,0,0.856003649656029,0,0.666219523631325,0.404950534779652,0.699561878128147,3.47008381894061,2.05671650408608,3.39511721438424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00669563634642,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6251303710604,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126473074248515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0.188368457004691,0.546776910884101,0.686334519619568,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0.0974578807397524,0.192423683280659,0.116876902181569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@uc007kvp.1 | |short_description=p3@uc007kvp.1 | ||
}} | }} |
Revision as of 16:29, 13 November 2012
Short description: | p3@uc007kvp.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_uc007kvp.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 450bp_to_uc007kvp.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 8.48e-27 | 6 |
megakaryocyte | 8.48e-27 | 6 |
lymphocyte of B lineage | 2.59e-18 | 1 |
B cell | 2.59e-18 | 1 |
pro-B cell | 2.59e-18 | 1 |
megakaryocyte-erythroid progenitor cell | 3.44e-18 | 9 |
myeloid lineage restricted progenitor cell | 7.26e-13 | 13 |
hematopoietic lineage restricted progenitor cell | 9.10e-12 | 25 |
myeloid cell | 1.31e-10 | 16 |
hematopoietic cell | 2.45e-09 | 32 |
hematopoietic oligopotent progenitor cell | 2.45e-09 | 32 |
hematopoietic stem cell | 2.45e-09 | 32 |
hematopoietic multipotent progenitor cell | 2.45e-09 | 32 |
common myeloid progenitor | 4.68e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
lymph node | 5.15e-19 | 1 |
axillary lymph node | 5.15e-19 | 1 |
peripheral lymph node | 5.15e-19 | 1 |
shoulder | 5.15e-19 | 1 |
bone marrow | 1.31e-10 | 16 |
bone element | 6.36e-08 | 22 |
skeletal element | 6.36e-08 | 22 |
skeletal system | 6.36e-08 | 22 |
lymphoid system | 3.18e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.