FFCP PHASE1:Mm9::chr5:9100656..9100667,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 7: | Line 7: | ||
|id=chr5:9100656..9100667,+ | |id=chr5:9100656..9100667,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.40e-14,25;CL:0000682,4.51e-11,3;CL:0000182,9.17e-11,5;CL:0000223,2.10e-09,20;CL:0000239,5.06e-09,6;CL:0000677,5.06e-09,6;CL:0000584,5.06e-09,6;CL:0000075,9.71e-08,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005911!1.21e-10!69;UBERON:0001007!1.56e-08!128;UBERON:0001555!1.56e-08!128;UBERON:0007026!1.56e-08!128;UBERON:0000344!3.95e-08!15;UBERON:0004119!4.06e-08!130;UBERON:0000925!4.06e-08!130;UBERON:0006595!4.06e-08!130;UBERON:0004921!7.50e-08!126;UBERON:0004185!7.50e-08!126;UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14;UBERON:0001242!3.54e-07!13;UBERON:0000060!3.54e-07!13;UBERON:0001262!3.54e-07!13;UBERON:0004786!3.54e-07!13 | |ontology_enrichment_uberon=UBERON:0005911!1.21e-10!69;UBERON:0001007!1.56e-08!128;UBERON:0001555!1.56e-08!128;UBERON:0007026!1.56e-08!128;UBERON:0000344!3.95e-08!15;UBERON:0004119!4.06e-08!130;UBERON:0000925!4.06e-08!130;UBERON:0006595!4.06e-08!130;UBERON:0004921!7.50e-08!126;UBERON:0004185!7.50e-08!126;UBERON:0002048!1.36e-07!14;UBERON:0000117!1.36e-07!14;UBERON:0000171!1.36e-07!14;UBERON:0000170!1.36e-07!14;UBERON:0005597!1.36e-07!14;UBERON:0000118!1.36e-07!14;UBERON:0001242!3.54e-07!13;UBERON:0000060!3.54e-07!13;UBERON:0001262!3.54e-07!13;UBERON:0004786!3.54e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005911,5.91e-15,69;UBERON:0002048,7.00e-11,14;UBERON:0000117,7.00e-11,14;UBERON:0000171,7.00e-11,14;UBERON:0000170,7.00e-11,14;UBERON:0005597,7.00e-11,14;UBERON:0000118,7.00e-11,14;UBERON:0005153,8.55e-09,17;UBERON:0005178,8.55e-09,17;UBERON:0005181,8.55e-09,17;UBERON:0002224,8.55e-09,17;UBERON:0000915,8.55e-09,17;UBERON:0008947,8.55e-09,17;UBERON:0003258,8.55e-09,17;UBERON:0004921,1.97e-08,114;UBERON:0001007,3.26e-08,116;UBERON:0001555,3.26e-08,116;UBERON:0007026,3.26e-08,116;UBERON:0004119,5.29e-08,118;UBERON:0000925,5.29e-08,118;UBERON:0006595,5.29e-08,118;UBERON:0003929,2.45e-07,55;UBERON:0005157,2.47e-07,20;UBERON:0001041,3.64e-07,80;UBERON:0009569,7.10e-07,66 | |||
|phase1_expression=0.160148847104794,4.53668029931169,1.36499771816861,1.81478526784098,1.50268718983904,0.671517087647559,0.934450562382103,0.516493293766305,1.97104211012333,1.17032263160997,0.171217968225505,0,0.171200729931206,0,0,0.202475267389826,0,0.946386496074713,1.64537320326887,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0.639969691173627,0.22940928106717,2.8711598205751,3.01533397311352,1.939241094173,1.14014051673824,0.756090389279792,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,1.17447824240415,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0,0.860423876981386,2.03991400112325,1.07940638327563,1.94932925234301,2.68816132258401,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0,0,0,0.68510327831436,0.776813650941515,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.476255494059295,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.991256348951394,0.528901133327089,0.213288250535234,0,0,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,1.37280706594041,0,1.11642284300551,0.312037673114561,1.01031551178845,0.538192240565737,0.964887042726734,1.84753190166605,0,0,0.169745085775188,0.234690248288502,0.670025029767263,5.2369600994923,4.29294025287157,0.315270288212382,0.44292937929755,1.2756381492599,1.14704320301017,1.55416483679306,2.89298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0 | |phase1_expression=0.160148847104794,4.53668029931169,1.36499771816861,1.81478526784098,1.50268718983904,0.671517087647559,0.934450562382103,0.516493293766305,1.97104211012333,1.17032263160997,0.171217968225505,0,0.171200729931206,0,0,0.202475267389826,0,0.946386496074713,1.64537320326887,0.84877930359606,0.340173160604279,0.0992909512008853,0.261199789138935,0.639969691173627,0.22940928106717,2.8711598205751,3.01533397311352,1.939241094173,1.14014051673824,0.756090389279792,0.886922042621219,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,1.17447824240415,0.725362142011344,0.336093799142464,0,0,0,0,0,0,0,0,0,0,1.4209602298922,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.151452386666368,0.0755715601067855,0,0.860423876981386,2.03991400112325,1.07940638327563,1.94932925234301,2.68816132258401,0.702222100658759,0,0.259786004602869,0,0,0,0,0,0,0,0,0.68510327831436,0.776813650941515,0.148442139064825,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0,0,0.510914110417183,0,0,0,0.149790639404823,0,0,0,0,0,0,0,0,0.505445516867349,0,0,0,0,0,0.476255494059295,0,0.0937017245597288,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0,0.991256348951394,0.528901133327089,0.213288250535234,0,0,0,0,0,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,1.37280706594041,0,1.11642284300551,0.312037673114561,1.01031551178845,0.538192240565737,0.964887042726734,1.84753190166605,0,0,0.169745085775188,0.234690248288502,0.670025029767263,5.2369600994923,4.29294025287157,0.315270288212382,0.44292937929755,1.2756381492599,1.14704320301017,1.55416483679306,2.89298117163023,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,1.13552068166615,0.534196811001766,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854354403989263,0,0,0,0.136694227721025,0.457556346413045,0,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0,0.352071715937262,0,0.209718688851422,0,0,0,0,0.102710957164827,0,0,0,0.120195449519969,0.295379054349154,0,0,0.100826185136841,0,0,0,0,0.221985953374065,0.179427713218951,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0.187283014939765,0.128050304809739,0.114870937911227,0,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0,0,0.282328141245992,0.0846146078916765,0,0,0.271608227691724,0,0,0.197008964751127,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@4930420K17Rik | |short_description=p2@4930420K17Rik | ||
}} | }} |
Revision as of 16:11, 13 November 2012
Short description: | p2@4930420K17Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_4930420K17Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -69bp_to_ENSMUST00000115365, NM_001081029, uc008wkv.1, uc008wkw.1_5end |
EntrezGene: | 4930420K17Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.40e-14 | 25 |
M cell of gut | 4.51e-11 | 3 |
hepatocyte | 9.17e-11 | 5 |
endodermal cell | 2.10e-09 | 20 |
brush border epithelial cell | 5.06e-09 | 6 |
gut absorptive cell | 5.06e-09 | 6 |
enterocyte | 5.06e-09 | 6 |
columnar/cuboidal epithelial cell | 9.71e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
endo-epithelium | 5.91e-15 | 69 |
lung | 7.00e-11 | 14 |
respiratory tube | 7.00e-11 | 14 |
respiration organ | 7.00e-11 | 14 |
pair of lungs | 7.00e-11 | 14 |
lung primordium | 7.00e-11 | 14 |
lung bud | 7.00e-11 | 14 |
epithelial bud | 8.55e-09 | 17 |
thoracic cavity element | 8.55e-09 | 17 |
thoracic segment organ | 8.55e-09 | 17 |
thoracic cavity | 8.55e-09 | 17 |
thoracic segment of trunk | 8.55e-09 | 17 |
respiratory primordium | 8.55e-09 | 17 |
endoderm of foregut | 8.55e-09 | 17 |
subdivision of digestive tract | 1.97e-08 | 114 |
digestive system | 3.26e-08 | 116 |
digestive tract | 3.26e-08 | 116 |
primitive gut | 3.26e-08 | 116 |
endoderm-derived structure | 5.29e-08 | 118 |
endoderm | 5.29e-08 | 118 |
presumptive endoderm | 5.29e-08 | 118 |
gut epithelium | 2.45e-07 | 55 |
epithelial fold | 2.47e-07 | 20 |
foregut | 3.64e-07 | 80 |
subdivision of trunk | 7.10e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.