FFCP PHASE1:Mm9::chr7:25669587..25669626,+: Difference between revisions
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|id=chr7:25669587..25669626,+ | |id=chr7:25669587..25669626,+ | ||
|ontology_enrichment_celltype=CL:0000144!2.58e-20!121;CL:0000012!2.58e-20!121;CL:0000548!8.02e-20!115;CL:0000004!8.02e-20!115;CL:0000255!8.02e-20!115;CL:0002371!1.62e-19!118;CL:0000034!1.72e-17!97;CL:0000723!4.80e-15!91;CL:0000048!4.80e-15!91;CL:0000219!7.97e-15!54;CL:0002320!1.81e-11!46;CL:0000134!1.81e-11!46;CL:0000988!9.44e-11!32;CL:0002032!9.44e-11!32;CL:0000037!9.44e-11!32;CL:0000566!9.44e-11!32;CL:0000837!9.44e-11!32;CL:0000063!2.56e-10!66;CL:0002031!9.62e-08!25;CL:0000049!2.01e-07!19;CL:0000055!9.97e-07!50 | |ontology_enrichment_celltype=CL:0000144!2.58e-20!121;CL:0000012!2.58e-20!121;CL:0000548!8.02e-20!115;CL:0000004!8.02e-20!115;CL:0000255!8.02e-20!115;CL:0002371!1.62e-19!118;CL:0000034!1.72e-17!97;CL:0000723!4.80e-15!91;CL:0000048!4.80e-15!91;CL:0000219!7.97e-15!54;CL:0002320!1.81e-11!46;CL:0000134!1.81e-11!46;CL:0000988!9.44e-11!32;CL:0002032!9.44e-11!32;CL:0000037!9.44e-11!32;CL:0000566!9.44e-11!32;CL:0000837!9.44e-11!32;CL:0000063!2.56e-10!66;CL:0002031!9.62e-08!25;CL:0000049!2.01e-07!19;CL:0000055!9.97e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,1.56e-17,97;CL:0000723,4.37e-15,91;CL:0000048,4.37e-15,91;CL:0000219,7.11e-15,54;CL:0002320,1.63e-11,46;CL:0000134,1.63e-11,46;CL:0000988,8.89e-11,32;CL:0002032,8.89e-11,32;CL:0000037,8.89e-11,32;CL:0000837,8.89e-11,32;CL:0002031,9.10e-08,25;CL:0000049,1.89e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.36e-13!45;UBERON:0003061!2.36e-13!45;UBERON:0002193!8.14e-13!48;UBERON:0002384!1.81e-11!46;UBERON:0002405!2.89e-09!70;UBERON:0002371!1.97e-07!16;UBERON:0004177!3.30e-07!29 | |ontology_enrichment_uberon=UBERON:0002390!2.36e-13!45;UBERON:0003061!2.36e-13!45;UBERON:0002193!8.14e-13!48;UBERON:0002384!1.81e-11!46;UBERON:0002405!2.89e-09!70;UBERON:0002371!1.97e-07!16;UBERON:0004177!3.30e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.22e-13,45;UBERON:0003061,2.22e-13,45;UBERON:0002193,7.70e-13,48;UBERON:0002405,7.70e-13,48;UBERON:0002384,1.63e-11,46;UBERON:0002371,1.97e-07,16;UBERON:0004177,3.14e-07,29;UBERON:0005057,3.14e-07,29 | |||
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| ||
|short_description=p1@Rps19-ps4,p1@Rps19-ps6,p1@Rps19 | |short_description=p1@Rps19-ps4,p1@Rps19-ps6,p1@Rps19 | ||
}} | }} |
Revision as of 16:03, 13 November 2012
Short description: | p1@Rps19-ps4, p1@Rps19-ps6, p1@Rps19 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rps19-ps4_5end, CAGE_peak_1_at_Rps19-ps6_5end, CAGE_peak_1_at_Rps19_5end |
Coexpression cluster: | MCL_coexpression_mm9:642 |
Association with transcript: | -25bp_to_ENSMUST00000129847_5end |
EntrezGene: | 100503302,20085,625929 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 1.56e-17 | 97 |
somatic stem cell | 4.37e-15 | 91 |
multi fate stem cell | 4.37e-15 | 91 |
motile cell | 7.11e-15 | 54 |
connective tissue cell | 1.63e-11 | 46 |
mesenchymal cell | 1.63e-11 | 46 |
hematopoietic cell | 8.89e-11 | 32 |
hematopoietic oligopotent progenitor cell | 8.89e-11 | 32 |
hematopoietic stem cell | 8.89e-11 | 32 |
hematopoietic multipotent progenitor cell | 8.89e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 9.10e-08 | 25 |
common myeloid progenitor | 1.89e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.22e-13 | 45 |
blood island | 2.22e-13 | 45 |
hemolymphoid system | 7.70e-13 | 48 |
immune system | 7.70e-13 | 48 |
connective tissue | 1.63e-11 | 46 |
bone marrow | 1.97e-07 | 16 |
hemopoietic organ | 3.14e-07 | 29 |
immune organ | 3.14e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.