FFCP PHASE1:Mm9::chr17:69611616..69611626,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr17:69611616..69611626,+ | |id=chr17:69611616..69611626,+ | ||
|ontology_enrichment_celltype=CL:0000117!6.58e-09!23;CL:0000337!6.58e-09!23;CL:0002610!9.08e-09!3;CL:0000540!3.29e-08!33;CL:0000047!3.29e-08!33;CL:0000031!3.29e-08!33;CL:0000404!3.29e-08!33;CL:0002614!4.69e-08!3 | |ontology_enrichment_celltype=CL:0000117!6.58e-09!23;CL:0000337!6.58e-09!23;CL:0002610!9.08e-09!3;CL:0000540!3.29e-08!33;CL:0000047!3.29e-08!33;CL:0000031!3.29e-08!33;CL:0000404!3.29e-08!33;CL:0002614!4.69e-08!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,6.24e-21,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!8.22e-24!50;UBERON:0006238!8.22e-24!50;UBERON:0001017!6.38e-23!73;UBERON:0005743!6.38e-23!73;UBERON:0002616!3.21e-22!49;UBERON:0000073!3.91e-22!75;UBERON:0001016!3.91e-22!75;UBERON:0001049!1.88e-20!52;UBERON:0005068!1.88e-20!52;UBERON:0006241!1.88e-20!52;UBERON:0007135!1.88e-20!52;UBERON:0000033!2.57e-19!63;UBERON:0004121!9.96e-16!102;UBERON:0000924!9.96e-16!102;UBERON:0006601!9.96e-16!102;UBERON:0002298!1.92e-15!6;UBERON:0002346!7.88e-15!71;UBERON:0003075!7.88e-15!71;UBERON:0007284!7.88e-15!71;UBERON:0003080!4.14e-14!40;UBERON:0002020!5.36e-13!34;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0007811!1.40e-12!86;UBERON:0003056!3.76e-12!49;UBERON:0002791!1.28e-11!29;UBERON:0003528!1.28e-11!29;UBERON:0001893!1.28e-11!29;UBERON:0000153!5.14e-11!94;UBERON:0002950!1.92e-10!4;UBERON:0001891!1.92e-10!4;UBERON:0009616!1.92e-10!4;UBERON:0004684!9.08e-09!3;UBERON:0002275!9.08e-09!3;UBERON:0002038!4.69e-08!3;UBERON:0002308!4.69e-08!3;UBERON:0009663!4.69e-08!3;UBERON:0009661!4.69e-08!3;UBERON:0006331!4.69e-08!3;UBERON:0000125!4.69e-08!3;UBERON:0002420!2.16e-07!8;UBERON:0007245!2.16e-07!8;UBERON:0010009!2.16e-07!8;UBERON:0010011!2.16e-07!8;UBERON:0000454!2.16e-07!8;UBERON:0003076!3.19e-07!12;UBERON:0003057!3.19e-07!12;UBERON:0000025!3.58e-07!114 | |ontology_enrichment_uberon=UBERON:0000955!8.22e-24!50;UBERON:0006238!8.22e-24!50;UBERON:0001017!6.38e-23!73;UBERON:0005743!6.38e-23!73;UBERON:0002616!3.21e-22!49;UBERON:0000073!3.91e-22!75;UBERON:0001016!3.91e-22!75;UBERON:0001049!1.88e-20!52;UBERON:0005068!1.88e-20!52;UBERON:0006241!1.88e-20!52;UBERON:0007135!1.88e-20!52;UBERON:0000033!2.57e-19!63;UBERON:0004121!9.96e-16!102;UBERON:0000924!9.96e-16!102;UBERON:0006601!9.96e-16!102;UBERON:0002298!1.92e-15!6;UBERON:0002346!7.88e-15!71;UBERON:0003075!7.88e-15!71;UBERON:0007284!7.88e-15!71;UBERON:0003080!4.14e-14!40;UBERON:0002020!5.36e-13!34;UBERON:0002780!1.26e-12!39;UBERON:0001890!1.26e-12!39;UBERON:0006240!1.26e-12!39;UBERON:0007811!1.40e-12!86;UBERON:0003056!3.76e-12!49;UBERON:0002791!1.28e-11!29;UBERON:0003528!1.28e-11!29;UBERON:0001893!1.28e-11!29;UBERON:0000153!5.14e-11!94;UBERON:0002950!1.92e-10!4;UBERON:0001891!1.92e-10!4;UBERON:0009616!1.92e-10!4;UBERON:0004684!9.08e-09!3;UBERON:0002275!9.08e-09!3;UBERON:0002038!4.69e-08!3;UBERON:0002308!4.69e-08!3;UBERON:0009663!4.69e-08!3;UBERON:0009661!4.69e-08!3;UBERON:0006331!4.69e-08!3;UBERON:0000125!4.69e-08!3;UBERON:0002420!2.16e-07!8;UBERON:0007245!2.16e-07!8;UBERON:0010009!2.16e-07!8;UBERON:0010011!2.16e-07!8;UBERON:0000454!2.16e-07!8;UBERON:0003076!3.19e-07!12;UBERON:0003057!3.19e-07!12;UBERON:0000025!3.58e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.24e-21,3;UBERON:0002275,6.24e-21,3;UBERON:0000073,6.21e-17,54;UBERON:0001896,3.45e-15,2;UBERON:0002298,3.45e-15,2;UBERON:0005290,3.45e-15,2;UBERON:0010096,3.45e-15,2;UBERON:0001017,1.30e-14,73;UBERON:0001016,3.42e-14,75;UBERON:0001049,3.93e-12,52;UBERON:0005068,3.93e-12,52;UBERON:0006241,3.93e-12,52;UBERON:0007135,3.93e-12,52;UBERON:0004121,5.96e-11,95;UBERON:0000924,5.96e-11,95;UBERON:0006601,5.96e-11,95;UBERON:0002346,1.15e-09,64;UBERON:0003075,1.15e-09,64;UBERON:0007284,1.15e-09,64;UBERON:0003076,1.20e-09,12;UBERON:0003057,1.20e-09,12;UBERON:0002616,9.43e-09,46;UBERON:0000955,1.50e-08,47;UBERON:0006238,1.50e-08,47;UBERON:0010371,2.43e-08,73;UBERON:0002259,4.10e-08,1;UBERON:0002314,4.10e-08,1;UBERON:0004061,4.10e-08,1;UBERON:0006777,4.10e-08,1;UBERON:0005882,4.10e-08,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,1.42825492201902,0.220868540951614,0,0,0,1.10115880999389,1.78762273319263,2.30409799884365,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,1.37250180845588,0,0.869121600961382,0,2.0778804455956,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,1.37016503954128,1.5107877947794,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270011876663381,0,1.42825492201902,0.220868540951614,0,0,0,1.10115880999389,1.78762273319263,2.30409799884365,0,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,1.64769703345305,1.37250180845588,0,0.869121600961382,0,2.0778804455956,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.53211297973142,3.5163505977661,0,0,0,0,0,0.238968797952552,0,0.283076530788832,0,0,0,0.321321316421807,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,6.11903496634682,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0.515559547031063,1.37016503954128,1.5107877947794,0,0,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:69611616..69611626,+ | |short_description=p@chr17:69611616..69611626,+ | ||
}} | }} |
Revision as of 15:50, 13 November 2012
Short description: | p@chr17:69611616..69611626, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:69611616..69611626, + |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 6.24e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.24e-21 | 3 |
reticular formation | 6.24e-21 | 3 |
regional part of nervous system | 6.21e-17 | 54 |
medulla oblongata | 3.45e-15 | 2 |
brainstem | 3.45e-15 | 2 |
myelencephalon | 3.45e-15 | 2 |
future myelencephalon | 3.45e-15 | 2 |
central nervous system | 1.30e-14 | 73 |
nervous system | 3.42e-14 | 75 |
neural tube | 3.93e-12 | 52 |
neural rod | 3.93e-12 | 52 |
future spinal cord | 3.93e-12 | 52 |
neural keel | 3.93e-12 | 52 |
ectoderm-derived structure | 5.96e-11 | 95 |
ectoderm | 5.96e-11 | 95 |
presumptive ectoderm | 5.96e-11 | 95 |
neurectoderm | 1.15e-09 | 64 |
neural plate | 1.15e-09 | 64 |
presumptive neural plate | 1.15e-09 | 64 |
posterior neural tube | 1.20e-09 | 12 |
chordal neural plate | 1.20e-09 | 12 |
regional part of brain | 9.43e-09 | 46 |
brain | 1.50e-08 | 47 |
future brain | 1.50e-08 | 47 |
ecto-epithelium | 2.43e-08 | 73 |
corpora quadrigemina | 4.10e-08 | 1 |
midbrain tectum | 4.10e-08 | 1 |
neural tube mantle layer | 4.10e-08 | 1 |
tectal plate | 4.10e-08 | 1 |
neural tube alar plate | 4.10e-08 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.