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|subset=uberon_slim;;vertebrate_core
|subset=uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=
|develops_from=UBERON:0002342
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=
|part_of=UBERON:0000922;;UBERON:0002539;;UBERON:0007303;;UBERON:0008814
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 13:36, 27 June 2012

Name:aortic arch
Definition:"One of a series of paired embryological vascular structures which give rise to several major arteries." [MP:0002672, Wikipedia:Aortic_arches]
Xrefs:
links:

AAO:0010414
EFO:0003695
EHDAA2:0000186
EHDAA:398
EHDAA:7327
EMAPA:16684
[ Gray473.png Gray473.png]
[ 200px-Gray473.png 200px-Gray473.png]
ncithesaurus:Aortic_Arch
TAO:0005004
VHOG:0000122
XAO:0000341

ZFA:0005004
Synonyms: "aa. arcuum pharyngeorum" RELATED LATIN [Wikipedia:Aortic_arches]
"aortic arches" EXACT PLURAL [ZFA:0005004]
"branchial aortic arches " EXACT PLURAL [ZFIN:ZDB-PUB-080512-6]
"branchial arch artery" EXACT [EMAPA:16684]
"embryonic aortic arch artery" EXACT [EMAPA:16684, MP:0002672]
Comments:Usage notes: Do not confuse with arch of aorta. Editor notes: add specific artery derivatives. Development notes: The third, fourth, and sixth arches, along with the seventh intersegmental arteries and the left dorsal aorta, are the primary contributors to the normal aortic arch and its major thoracic branches. Taxon notes: Number varies - Lampreys have 8, hagfishes 15; only up to 6 appear in embryonic development in most gnathostome fishes and all tetrapods
Alt_id: UBERON:0004342
UBERON:FMA_3768-MA_0000475-MIAA_0000059
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000078(mixed ectoderm/mesoderm/endoderm-derived structure),UBERON:0003351(pharyngeal epithelium),UBERON:0003469(respiratory system artery),UBERON:0003496(head blood vessel),UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010313(neural crest-derived structure),UBERON:0010371(ecto-epithelium)
develops_from:UBERON:0002342(neural crest)
part_of:UBERON:0000922(embryo),UBERON:0002539(pharyngeal arch),UBERON:0007303(pharyngeal vasculature),UBERON:0008814(pharyngeal arch system)



Children

develops from:UBERON:0005432 (aortic sac)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004363 (aortic arch), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_454c958293fc736374d22e69c796c210p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_454c958293fc736374d22e69c796c210p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_454c958293fc736374d22e69c796c210p@chr8:90366581..90366594, -
1.55e-98FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_454c958293fc736374d22e69c796c210p@chr6:21648948..21648949, +
1.55e-98FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_454c958293fc736374d22e69c796c210p@chr4:70707713..70707716, -
1.55e-98FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_454c958293fc736374d22e69c796c210p@chr8:90366581..90366594, -
2.74e-50FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_5b60562efb7167493d232095049bc0a3p@chr4:70707556..70707558, -
2.74e-50FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_5b60562efb7167493d232095049bc0a3p@chr4:70707556..70707558, -
4.52e-50FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_34cfe4baf91380c5031c0e45d8319129p@chr3:158928407..158928414, +
4.52e-50FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_34cfe4baf91380c5031c0e45d8319129p@chrX:23072856..23072859, -
4.52e-50FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_34cfe4baf91380c5031c0e45d8319129p14@FAS
4.52e-50FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_34cfe4baf91380c5031c0e45d8319129p26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_34cfe4baf91380c5031c0e45d8319129p@chr3:158928407..158928414, +
4.52e-50FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_34cfe4baf91380c5031c0e45d8319129p@chrX:23072856..23072859, -
4.52e-50FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_34cfe4baf91380c5031c0e45d8319129p@chr8:120651826..120651840, -
4.52e-50FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_34cfe4baf91380c5031c0e45d8319129p14@FAS
4.52e-50FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_34cfe4baf91380c5031c0e45d8319129p26@LINC00340
4.52e-50FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_34cfe4baf91380c5031c0e45d8319129p@chr8:120651826..120651840, -
3.61e-34FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_6e4080e9e9e9d90f6191f9ae179e26d3p@chr4:70707608..70707615, -
3.61e-34FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_6e4080e9e9e9d90f6191f9ae179e26d3p@chr4:70707608..70707615, -
5.04e-34FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr11:131614903..131614910, -
5.04e-34FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr3:156258392..156258395, -
5.04e-34FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_8ee1c61c489f792da5a5c3b883b68e5ap@chr4:70690584..70690589, +
5.04e-34FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr11:131614903..131614910, -
5.04e-34FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr17:76824975..76824978, -
5.04e-34FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr3:156258392..156258395, -
5.04e-34FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_8ee1c61c489f792da5a5c3b883b68e5ap@chr4:70690584..70690589, +
5.04e-34FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_8ee1c61c489f792da5a5c3b883b68e5ap@chr17:76824975..76824978, -
7.05e-34FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_24e74676fcb34062788ec7dd5a622ba1p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_24e74676fcb34062788ec7dd5a622ba1p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_24e74676fcb34062788ec7dd5a622ba1p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_24e74676fcb34062788ec7dd5a622ba1p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_24e74676fcb34062788ec7dd5a622ba1p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_24e74676fcb34062788ec7dd5a622ba1p13@PTGIS
7.05e-34FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_24e74676fcb34062788ec7dd5a622ba1p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_24e74676fcb34062788ec7dd5a622ba1p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_24e74676fcb34062788ec7dd5a622ba1p1@CACNG8
7.05e-34FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_24e74676fcb34062788ec7dd5a622ba1p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_24e74676fcb34062788ec7dd5a622ba1p@chr4:38147484..38147500, -
7.05e-34FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_24e74676fcb34062788ec7dd5a622ba1p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_24e74676fcb34062788ec7dd5a622ba1p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_24e74676fcb34062788ec7dd5a622ba1p1@ENST00000406333
7.05e-34FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_24e74676fcb34062788ec7dd5a622ba1p@chr7:18834859..18834879, -
7.05e-34FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_24e74676fcb34062788ec7dd5a622ba1p13@PTGIS
7.05e-34FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_24e74676fcb34062788ec7dd5a622ba1p@chr4:24645959..24645967, +
7.05e-34FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_24e74676fcb34062788ec7dd5a622ba1p@chrX:140904171..140904173, +
7.05e-34FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_24e74676fcb34062788ec7dd5a622ba1p@chr8:134047162..134047169, +
7.05e-34FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_24e74676fcb34062788ec7dd5a622ba1p@chr9:16059821..16059828, +
7.05e-34FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_24e74676fcb34062788ec7dd5a622ba1p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_24e74676fcb34062788ec7dd5a622ba1p@chr7:22687639..22687644, +
7.05e-34FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_24e74676fcb34062788ec7dd5a622ba1p1@CACNG8
7.05e-34FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_24e74676fcb34062788ec7dd5a622ba1p@chr1:176668544..176668553, +
7.05e-34FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_24e74676fcb34062788ec7dd5a622ba1p19@AMOTL1
7.05e-34FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_24e74676fcb34062788ec7dd5a622ba1p@chr13:38136724..38136726, +
7.05e-34FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_24e74676fcb34062788ec7dd5a622ba1p@chr1:93043102..93043113, -
7.05e-34FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_24e74676fcb34062788ec7dd5a622ba1p@chr7:18834859..18834879, -
5.56e-26FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_ab2e865c773fb520c4416491e3022312p@chr9:33797893..33797903, +
5.56e-26FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_ab2e865c773fb520c4416491e3022312p@chr9:33797893..33797903, +
7.14e-26FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p16@HMGA1
7.14e-26FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p13@RAB11FIP5
7.14e-26FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr4:891819..891820,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p1@SNORD105
7.14e-26FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr17:61995172..61995199, -
7.14e-26FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr18:65175930..65175941, +
7.14e-26FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p13@RAB11FIP5
7.14e-26FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr19:15509437..15509442, -
7.14e-26FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p16@HMGA1
7.14e-26FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p1@ENST00000492301
7.14e-26FFCP PHASE1:Hg19::chr4:891819..891820,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr4:891819..891820, -
7.14e-26FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p1@SNORD105
7.14e-26FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_28f1c2fc6e2f44d4cbee3183e41f74d8p@chr8:123580995..123581003, -
7.14e-26FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_28f1c2fc6e2f44d4cbee3183e41f74d8p1@ENST00000492301
9.18e-26FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap10@FAM92A1
9.18e-26FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr2:238116338..238116342, -
9.18e-26FFCP PHASE1:Hg19::chr19:681941..681952,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr1:185703364..185703371, -
9.18e-26FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr6:148593641..148593643, +
9.18e-26FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr9:33797981..33798005, -
9.18e-26FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr3:11675748..11675759, -
9.18e-26FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr5:146890197..146890224, -
9.18e-26FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap28@ANK2
9.18e-26FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr15:71371688..71371691, -
9.18e-26FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap5@BC031228
9.18e-26FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr4:74392579..74392583, +
9.18e-26FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap10@FAM92A1
9.18e-26FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr2:84316409..84316414, -
9.18e-26FFCP PHASE2:Hg19::chr19:681941..681952,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr19:681941..681952, +
9.18e-26FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr15:71371688..71371691, -
9.18e-26FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr6:148593641..148593643, +
9.18e-26FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr2:238116338..238116342, -
9.18e-26FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr1:185703364..185703371, -
9.18e-26FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr9:33797981..33798005, -
9.18e-26FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap5@BC031228
9.18e-26FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_b2d6a0071b881d6a6cfb8ab76de88e3ap1@ENST00000521989
9.18e-26FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_b2d6a0071b881d6a6cfb8ab76de88e3ap@chr4:74392579..74392583, +

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