CL:0000548: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
Revision as of 17:25, 26 June 2012
| Name: | animal cell |
|---|---|
| Namespace: | cell |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000255(eukaryotic cell) |
|---|
Children
| is a: | CL:0000039 (germ line cell),CL:0000066 (epithelial cell),CL:0000186 (myofibroblast cell),CL:0000187 (muscle cell),CL:0000349 (extraembryonic cell),CL:0000988 (hematopoietic cell),CL:0001035 (bone cell),CL:0002319 (neural cell),CL:0002320 (connective tissue cell),CL:0002321 (embryonic cell),CL:0002494 (cardiocyte),CL:1000497 (kidney cell),CL:1000600 (lower urinary tract cell) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
- 10413-106B8 (glioma cell line:GI-1)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
... further results Mouse (Mus musculus)
- 10399-106A3 (acute myeloid leukemia (FAB M5) cell line:THP-1 (fresh))
- 10400-106A4 (acute myeloid leukemia (FAB M5) cell line:THP-1 (revived))
- 10405-106A9 (acute myeloid leukemia (FAB M5) cell line:THP-1 (thawed))
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10409-106B4 (chronic myelogenous leukemia cell line:KU812)
- 10410-106B5 (extraskeletal myxoid chondrosarcoma cell line:H-EMC-SS)
- 10411-106B6 (renal cell carcinoma cell line:OS-RC-2)
- 10412-106B7 (malignant trichilemmal cyst cell line:DJM-1)
- 10413-106B8 (glioma cell line:GI-1)
- 10415-106C1 (gall bladder carcinoma cell line:TGBC2TKB)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000548 (animal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
No analysis results for this cluster
