FFCP PHASE1:Mm9::chr11:86859347..86859362,-: Difference between revisions
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|id=chr11:86859347..86859362,- | |id=chr11:86859347..86859362,- | ||
|ontology_enrichment_celltype=CL:0000117!2.30e-13!23;CL:0000337!2.30e-13!23;CL:0000540!1.07e-12!33;CL:0000047!1.07e-12!33;CL:0000031!1.07e-12!33;CL:0000404!1.07e-12!33;CL:0000393!8.28e-12!39;CL:0000211!8.28e-12!39;CL:0000221!6.00e-09!44;CL:0000133!6.00e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.89e-08!50;CL:0002321!8.97e-07!70;CL:0000220!8.97e-07!70 | |ontology_enrichment_celltype=CL:0000117!2.30e-13!23;CL:0000337!2.30e-13!23;CL:0000540!1.07e-12!33;CL:0000047!1.07e-12!33;CL:0000031!1.07e-12!33;CL:0000404!1.07e-12!33;CL:0000393!8.28e-12!39;CL:0000211!8.28e-12!39;CL:0000221!6.00e-09!44;CL:0000133!6.00e-09!44;CL:0002319!8.21e-09!43;CL:0000055!3.89e-08!50;CL:0002321!8.97e-07!70;CL:0000220!8.97e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000120,2.84e-14,3;CL:0000117,6.56e-12,23;CL:0000337,6.56e-12,23;CL:0002476,2.22e-10,2;CL:0000540,5.28e-08,33;CL:0000047,5.28e-08,33;CL:0000031,5.28e-08,33;CL:0000404,5.28e-08,33;CL:0002613,5.52e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!1.02e-08!34;UBERON:0004121!1.09e-08!102;UBERON:0000924!1.09e-08!102;UBERON:0006601!1.09e-08!102;UBERON:0001017!1.76e-08!73;UBERON:0005743!1.76e-08!73;UBERON:0000073!2.80e-08!75;UBERON:0001016!2.80e-08!75;UBERON:0002420!4.90e-07!8;UBERON:0007245!4.90e-07!8;UBERON:0010009!4.90e-07!8;UBERON:0010011!4.90e-07!8;UBERON:0000454!4.90e-07!8;UBERON:0000033!4.96e-07!63 | |ontology_enrichment_uberon=UBERON:0002020!1.02e-08!34;UBERON:0004121!1.09e-08!102;UBERON:0000924!1.09e-08!102;UBERON:0006601!1.09e-08!102;UBERON:0001017!1.76e-08!73;UBERON:0005743!1.76e-08!73;UBERON:0000073!2.80e-08!75;UBERON:0001016!2.80e-08!75;UBERON:0002420!4.90e-07!8;UBERON:0007245!4.90e-07!8;UBERON:0010009!4.90e-07!8;UBERON:0010011!4.90e-07!8;UBERON:0000454!4.90e-07!8;UBERON:0000033!4.96e-07!63 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,1.72e-15,3;UBERON:0002116,1.72e-15,3;UBERON:0001204,1.72e-15,3;UBERON:0001168,1.72e-15,3;UBERON:0002108,9.46e-12,4;UBERON:0002420,2.24e-09,8;UBERON:0007245,2.24e-09,8;UBERON:0010009,2.24e-09,8;UBERON:0010011,2.24e-09,8;UBERON:0000454,2.24e-09,8;UBERON:0000369,7.84e-09,5;UBERON:0002435,7.84e-09,5;UBERON:0000204,7.84e-09,5;UBERON:0010082,7.84e-09,5;UBERON:0003528,3.33e-07,29;UBERON:0002791,3.33e-07,29;UBERON:0001893,3.33e-07,29 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0.261199789138935,0.47997726838022,0.91763712426868,0.57423196411502,0,0.861884930743556,3.04037471130198,4.28451220591882,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0.899899717281399,0,0,0,0.768436610643109,1.24427534770173,3.78016627328734,0.841299845405528,0.285650984403804,0.883474163806454,0.367472397644862,0.958454710182364,0,0,0.383062014255563,0.768032666281217,0.791317726381163,1.64677758484337,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0.628340120440365,0,0,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.173824320192276,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0.459804208866946,0.720248519221397,0.30140963567143,0.0680364991513279,0.640568601424249,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0.411618449517138,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.796565093017469,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,3.01582567878545,1.08781136763742,0,0,0.481651769963376,0.234423373184406,0,0,0.94652465824877,0,0,0.477937595905104,0,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0,0,0.370850604021019,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,3.38215763210514,0,0,0.194451188344048,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.619747364743864,0.192906610981141,0.499621155875892,0,0,0,0,0 | |phase1_expression=0.160148847104794,0.348975407639361,0,0.30246421130683,1.00179145989269,0.503637815735669,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0.261199789138935,0.47997726838022,0.91763712426868,0.57423196411502,0,0.861884930743556,3.04037471130198,4.28451220591882,1.77384408524244,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,1.90149421051854,0,0,0.899899717281399,0,0,0,0.768436610643109,1.24427534770173,3.78016627328734,0.841299845405528,0.285650984403804,0.883474163806454,0.367472397644862,0.958454710182364,0,0,0.383062014255563,0.768032666281217,0.791317726381163,1.64677758484337,1.04182674111352,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,0.745597783301202,0,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0.14084341977668,0,0,0,0,0,0.505524445014783,0.45673551887624,0,0,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,1.86391761218122,0,0.628340120440365,0,0,0,0,0.149790639404823,1.37250180845588,0.376963056338593,0.173824320192276,0,0,0,0,0.124406970610093,0,0.210441855886474,0,0.459804208866946,0.720248519221397,0.30140963567143,0.0680364991513279,0.640568601424249,0,0.258703370739016,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0.540186184383045,0,0,0.154267112887378,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0,0,0,0,0.411618449517138,0.330418782983798,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0.432276099749388,0.796565093017469,0,0,0,0.203651327845314,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.482443521363367,0.369506380333209,0,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0.144649058581512,3.01582567878545,1.08781136763742,0,0,0.481651769963376,0.234423373184406,0,0,0.94652465824877,0,0,0.477937595905104,0,0.566153061577665,0,0.292255857911312,0.395287777946524,0.321321316421807,0,0.178065603667255,0.162886959353576,0,0,0,0,0,0.590603785761546,0,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,0,0,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0,0,0.370850604021019,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.388844919875379,1.24267862617385,3.38215763210514,0,0,0.194451188344048,0,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0.0962118416403295,0,0.680191150845634,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0,0,0,0,0.170733605754134,0.243106717068294,0,0,0,0,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0.0574354689556133,0,0,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.526139422875686,0.135804113845862,0,0,0,0,0.619747364743864,0.192906610981141,0.499621155875892,0,0,0,0,0 | ||
|short_description=p@chr11:86859347..86859362,- | |short_description=p@chr11:86859347..86859362,- | ||
}} | }} |
Revision as of 16:12, 13 November 2012
Short description: | p@chr11:86859347..86859362, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:86859347..86859362, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granule cell | 2.84e-14 | 3 |
CNS neuron (sensu Vertebrata) | 6.56e-12 | 23 |
neuroblast (sensu Vertebrata) | 6.56e-12 | 23 |
bone marrow macrophage | 2.22e-10 | 2 |
neuron | 5.28e-08 | 33 |
neuronal stem cell | 5.28e-08 | 33 |
neuroblast | 5.28e-08 | 33 |
electrically signaling cell | 5.28e-08 | 33 |
striatum neuron | 5.52e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 1.72e-15 | 3 |
ileum | 1.72e-15 | 3 |
mucosa of small intestine | 1.72e-15 | 3 |
wall of small intestine | 1.72e-15 | 3 |
small intestine | 9.46e-12 | 4 |
basal ganglion | 2.24e-09 | 8 |
nuclear complex of neuraxis | 2.24e-09 | 8 |
aggregate regional part of brain | 2.24e-09 | 8 |
collection of basal ganglia | 2.24e-09 | 8 |
cerebral subcortex | 2.24e-09 | 8 |
corpus striatum | 7.84e-09 | 5 |
striatum | 7.84e-09 | 5 |
ventral part of telencephalon | 7.84e-09 | 5 |
future corpus striatum | 7.84e-09 | 5 |
brain grey matter | 3.33e-07 | 29 |
regional part of telencephalon | 3.33e-07 | 29 |
telencephalon | 3.33e-07 | 29 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.