FFCP PHASE1:Mm9::chr11:86415755..86415805,-: Difference between revisions
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|id=chr11:86415755..86415805,- | |id=chr11:86415755..86415805,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.15e-13,6;CL:0000187,1.15e-13,6;CL:0000056,1.15e-13,6;CL:0000222,1.35e-11,7;CL:0000355,1.48e-11,9;CL:0002194,1.65e-09,4;CL:0000766,1.65e-09,4;CL:0000234,1.65e-09,4;CL:0000576,1.65e-09,4;CL:0000235,1.65e-09,4;CL:0000864,1.65e-09,4;CL:0002009,1.65e-09,4;CL:0000040,1.65e-09,4;CL:0000559,1.65e-09,4;CL:0002494,5.85e-08,3;CL:0000737,5.85e-08,3;CL:0002092,5.85e-08,3;CL:0002540,5.85e-08,3;CL:0000746,5.85e-08,3;CL:0000513,5.85e-08,3;CL:0000723,1.68e-07,91;CL:0000048,1.68e-07,91;CL:0000192,2.54e-07,3;CL:0000359,2.54e-07,3;CL:0002539,2.54e-07,3;CL:0000514,2.54e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.48e-11,9;UBERON:0002036,1.48e-11,9;UBERON:0002385,1.48e-11,9;UBERON:0000486,1.48e-11,9;UBERON:0007503,1.48e-11,9;UBERON:0001015,1.48e-11,9;UBERON:0002329,1.48e-11,9;UBERON:0003082,1.48e-11,9;UBERON:0003059,1.48e-11,9;UBERON:0007282,1.48e-11,9;UBERON:0004290,1.48e-11,9;UBERON:0009618,1.48e-11,9;UBERON:0003975,4.09e-11,5;UBERON:0002204,5.15e-11,32;UBERON:0000383,2.78e-10,10;UBERON:0005795,2.57e-09,4;UBERON:0000995,2.57e-09,4;UBERON:0003134,3.01e-09,8;UBERON:0007524,3.04e-09,11;UBERON:0003077,3.04e-09,11;UBERON:0007285,3.04e-09,11;UBERON:0004175,3.44e-08,9;UBERON:0000474,3.88e-08,9;UBERON:0001135,2.54e-07,3;UBERON:0004237,2.54e-07,3;UBERON:0004695,2.54e-07,3;UBERON:0002111,2.54e-07,3;UBERON:0004178,2.54e-07,3;UBERON:0005631,5.02e-07,3;UBERON:0000478,5.02e-07,3;UBERON:0000158,5.02e-07,3 | |||
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| ||
|short_description=p6@Vmp1 | |short_description=p6@Vmp1 | ||
}} | }} |
Revision as of 18:12, 13 November 2012
Short description: | p6@Vmp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Vmp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000123590, ENSMUST00000153971_5end |
EntrezGene: | Vmp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.15e-13 | 6 |
muscle cell | 1.15e-13 | 6 |
myoblast | 1.15e-13 | 6 |
mesodermal cell | 1.35e-11 | 7 |
multi-potent skeletal muscle stem cell | 1.48e-11 | 9 |
monopoietic cell | 1.65e-09 | 4 |
myeloid leukocyte | 1.65e-09 | 4 |
phagocyte | 1.65e-09 | 4 |
monocyte | 1.65e-09 | 4 |
macrophage | 1.65e-09 | 4 |
tissue-resident macrophage | 1.65e-09 | 4 |
macrophage dendritic cell progenitor | 1.65e-09 | 4 |
monoblast | 1.65e-09 | 4 |
promonocyte | 1.65e-09 | 4 |
cardiocyte | 5.85e-08 | 3 |
striated muscle cell | 5.85e-08 | 3 |
bone marrow cell | 5.85e-08 | 3 |
mesenchymal stem cell of the bone marrow | 5.85e-08 | 3 |
cardiac muscle cell | 5.85e-08 | 3 |
cardiac muscle myoblast | 5.85e-08 | 3 |
somatic stem cell | 1.68e-07 | 91 |
multi fate stem cell | 1.68e-07 | 91 |
smooth muscle cell | 2.54e-07 | 3 |
vascular associated smooth muscle cell | 2.54e-07 | 3 |
aortic smooth muscle cell | 2.54e-07 | 3 |
smooth muscle myoblast | 2.54e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.48e-11 | 9 |
striated muscle tissue | 1.48e-11 | 9 |
muscle tissue | 1.48e-11 | 9 |
multilaminar epithelium | 1.48e-11 | 9 |
epithelial vesicle | 1.48e-11 | 9 |
musculature | 1.48e-11 | 9 |
somite | 1.48e-11 | 9 |
myotome | 1.48e-11 | 9 |
presomitic mesoderm | 1.48e-11 | 9 |
presumptive segmental plate | 1.48e-11 | 9 |
dermomyotome | 1.48e-11 | 9 |
trunk paraxial mesoderm | 1.48e-11 | 9 |
internal female genitalia | 4.09e-11 | 5 |
musculoskeletal system | 5.15e-11 | 32 |
musculature of body | 2.78e-10 | 10 |
embryonic uterus | 2.57e-09 | 4 |
uterus | 2.57e-09 | 4 |
female reproductive organ | 3.01e-09 | 8 |
dense mesenchyme tissue | 3.04e-09 | 11 |
paraxial mesoderm | 3.04e-09 | 11 |
presumptive paraxial mesoderm | 3.04e-09 | 11 |
internal genitalia | 3.44e-08 | 9 |
female reproductive system | 3.88e-08 | 9 |
smooth muscle tissue | 2.54e-07 | 3 |
blood vessel smooth muscle | 2.54e-07 | 3 |
arterial system smooth muscle | 2.54e-07 | 3 |
artery smooth muscle tissue | 2.54e-07 | 3 |
aorta smooth muscle tissue | 2.54e-07 | 3 |
extraembryonic membrane | 5.02e-07 | 3 |
extraembryonic structure | 5.02e-07 | 3 |
membranous layer | 5.02e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.