FFCP PHASE2:Mm9::chr13:73815603..73815628,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:22598 |HGNC= |MCL_coexpression_id=11 |TSSclassifier=NA |UniProt=uniprot:O88576 |association_with_transcript=-132bp_...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=22598 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=11 | |MCL_coexpression_id=11 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=O88576 | ||
|association_with_transcript=-132bp_to_ENSMUST00000022105,ENSMUST00000109679,ENSMUST00000109680,NM_001040692,NM_001136087,NM_001168643,NM_001168644,NM_001168645,NM_001168646,uc007rds.2,uc007rdt.2,uc007rdu.2,uc007rdv.2,uc007rdw.2,uc007rdx.2,uc011zbr.1_5end | |association_with_transcript=-132bp_to_ENSMUST00000022105,ENSMUST00000109679,ENSMUST00000109680,NM_001040692,NM_001136087,NM_001168643,NM_001168644,NM_001168645,NM_001168646,uc007rds.2,uc007rdt.2,uc007rdu.2,uc007rdv.2,uc007rdw.2,uc007rdx.2,uc011zbr.1_5end | ||
|cluster_id=chr13:73815603..73815628,- | |cluster_id=chr13:73815603..73815628,- | ||
Latest revision as of 22:16, 1 October 2015
| Short description: | p4@Slc6a18 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Slc6a18_5end |
| Coexpression cluster: | MCL_coexpression_mm9:11 |
| Association with transcript: | -132bp_to_ENSMUST00000022105, ENSMUST00000109679, ENSMUST00000109680, NM_001040692, NM_001136087, NM_001168643, NM_001168644, NM_001168645, NM_001168646, uc007rds.2, uc007rdt.2, uc007rdu.2, uc007rdv.2, uc007rdw.2, uc007rdx.2, uc011zbr.1_5end |
| EntrezGene: | Slc6a18 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| kidney | 2.78e-32 | 14 |
| kidney mesenchyme | 2.78e-32 | 14 |
| upper urinary tract | 2.78e-32 | 14 |
| kidney rudiment | 2.78e-32 | 14 |
| kidney field | 2.78e-32 | 14 |
| urinary system structure | 3.32e-25 | 18 |
| renal system | 6.71e-24 | 19 |
| cavitated compound organ | 1.17e-21 | 21 |
| compound organ | 1.02e-10 | 43 |
| mesenchyme | 3.20e-10 | 61 |
| entire embryonic mesenchyme | 3.20e-10 | 61 |
| abdomen element | 2.00e-09 | 49 |
| abdominal segment element | 2.00e-09 | 49 |
| abdominal segment of trunk | 2.00e-09 | 49 |
| abdomen | 2.00e-09 | 49 |
| subdivision of trunk | 5.00e-07 | 66 |
