FFCP PHASE1:Hg19::chr1:28764653..28764670,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=65979 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25793 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8IZ21 | ||
|association_with_transcript=0bp_to_NM_023923,uc001bpy.2_5end | |association_with_transcript=0bp_to_NM_023923,uc001bpy.2_5end | ||
|cluster_id=chr1:28764653..28764670,+ | |cluster_id=chr1:28764653..28764670,+ | ||
Latest revision as of 10:23, 17 September 2015
| Short description: | p2@PHACTR4 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PHACTR4_5end |
| Coexpression cluster: | C1474_Mast_CD34_immature_CD14_CD133_pleomorphic_granulocyte |
| Association with transcript: | 0bp_to_NM_023923, uc001bpy.2_5end |
| EntrezGene: | PHACTR4 |
| HGNC: | 25793 |
| UniProt: | Q8IZ21 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@PHACTR4 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| lining cell | 1.27e-14 | 58 |
| barrier cell | 1.27e-14 | 58 |
| squamous epithelial cell | 1.03e-13 | 63 |
| endothelial cell of vascular tree | 1.02e-11 | 24 |
| granulocyte monocyte progenitor cell | 1.61e-10 | 67 |
| blood vessel endothelial cell | 1.66e-10 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.66e-10 | 18 |
| endothelial cell | 1.71e-10 | 36 |
| epithelial cell | 5.30e-10 | 253 |
| meso-epithelial cell | 4.89e-09 | 45 |
Showing 1 to 10 of 18 entries
| Ontology term | p-value | n |
|---|---|---|
| immune system | 4.47e-12 | 93 |
| bone marrow | 1.63e-11 | 76 |
| bone element | 2.25e-11 | 82 |
| simple squamous epithelium | 6.80e-11 | 22 |
| skeletal element | 8.23e-11 | 90 |
| blood vessel endothelium | 1.66e-10 | 18 |
| endothelium | 1.66e-10 | 18 |
| cardiovascular system endothelium | 1.66e-10 | 18 |
| skeletal system | 5.34e-10 | 100 |
| squamous epithelium | 9.96e-10 | 25 |
Showing 1 to 10 of 11 entries
