FFCP PHASE1:Hg19::chr19:14247387..14247409,-: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=55723 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=20996 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
Latest revision as of 03:51, 16 September 2015
| Short description: | p1@ASF1B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ASF1B_5end |
| Coexpression cluster: | C1713_Alveolar_Renal_Hodgkin_chronic_MCF7_Placental_Melanocyte |
| Association with transcript: | -1bp_to_ENST00000474890_5end |
| EntrezGene: | ASF1B |
| HGNC: | 20996 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ASF1B |
|---|
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25
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150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.84e-19 | 253 |
| migratory neural crest cell | 2.12e-07 | 41 |
| epithelial cell of nephron | 4.60e-07 | 15 |
| kidney cell | 5.43e-07 | 17 |
| kidney epithelial cell | 5.43e-07 | 17 |
| embryonic cell | 6.44e-07 | 250 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| nephron epithelium | 4.60e-07 | 15 |
| renal tubule | 4.60e-07 | 15 |
| nephron tubule | 4.60e-07 | 15 |
| nephron | 4.60e-07 | 15 |
| uriniferous tubule | 4.60e-07 | 15 |
| nephrogenic mesenchyme | 4.60e-07 | 15 |
| larynx | 5.32e-07 | 9 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| cancer | 1.28e-38 | 235 |
| disease of cellular proliferation | 4.21e-37 | 239 |
| hematologic cancer | 1.43e-20 | 51 |
| immune system cancer | 1.43e-20 | 51 |
| organ system cancer | 2.55e-19 | 137 |
| cell type cancer | 5.02e-17 | 143 |
| leukemia | 5.32e-16 | 39 |
| carcinoma | 9.28e-16 | 106 |
| myeloid leukemia | 9.38e-12 | 31 |
| lymphoma | 7.82e-07 | 10 |
Showing 1 to 10 of 10 entries
