FFCP PHASE2:Hg19::chr18:56246346..56246375,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:115701 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:20565 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=115701 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=20565 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q86TB3 | ||
|association_with_transcript=0bp_to_AK092133,AX747371_5end | |association_with_transcript=0bp_to_AK092133,AX747371_5end | ||
|cluster_id=chr18:56246346..56246375,- | |cluster_id=chr18:56246346..56246375,- |
Latest revision as of 00:03, 20 September 2015
Short description: | p6@ALPK2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ALPK2_5end |
Coexpression cluster: | C1324_Fibroblast_Preadipocyte_basal_migratory_mesenchymal_Smooth_spindle |
Association with transcript: | 0bp_to_AK092133, AX747371_5end |
EntrezGene: | ALPK2 |
HGNC: | 20565 |
UniProt: | Q86TB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p6@ALPK2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.06e-19 | 76 |
preadipocyte | 2.14e-14 | 12 |
skin fibroblast | 2.45e-13 | 23 |
motile cell | 1.12e-09 | 386 |
multi fate stem cell | 4.09e-09 | 427 |
mesenchymal cell | 4.35e-09 | 354 |
somatic stem cell | 1.11e-08 | 433 |
connective tissue cell | 1.54e-08 | 361 |
stem cell | 3.96e-08 | 441 |
mesothelial cell | 4.70e-08 | 19 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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integument | 1.61e-12 | 46 |
integumental system | 1.61e-12 | 46 |
skin of body | 5.01e-11 | 41 |
connective tissue | 3.54e-09 | 371 |
surface structure | 1.26e-07 | 99 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
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musculoskeletal system disease | 5.00e-10 | 5 |
myotonic disease | 5.00e-10 | 5 |
muscle tissue disease | 5.00e-10 | 5 |
myopathy | 5.00e-10 | 5 |
muscular disease | 5.00e-10 | 5 |
myotonic dystrophy | 5.00e-10 | 5 |
Showing 1 to 6 of 6 entries