UBERON:0003823: Difference between revisions
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|located_in= | |located_in= | ||
|name=hindlimb zeugopod | |name=hindlimb zeugopod | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002103;;UBERON:0000978;;UBERON:0002103 | |part_of=UBERON:0002103;;UBERON:0000978;;UBERON:0002103 | ||
Latest revision as of 17:41, 12 September 2014
| Name: | hindlimb zeugopod | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A zeugopod that is part of a hindlimb [Obol]." [OBOL:automatic] | ||
| Xrefs: |
| ||
| Synonyms: |
"calf" NARROW [] "calf of leg" EXACT [FMA:24984] "crus" EXACT [VSAO:0005060] "crus of hindlimb" EXACT [] "hind epipodium" RELATED INCONSISTENT [] "hind limb middle limb segment" EXACT [OBOL:automatic] "hind limb zeugopod" EXACT [OBOL:automatic] "hindlimb epipodium" EXACT [] "hindlimb middle limb segment" EXACT [OBOL:automatic] "hindlimb zeugopod" EXACT [OBOL:automatic] "hindlimb zeugopodium" EXACT [OBOL:automatic] "intermediate segment of free lower limb" EXACT [FMA:24979] "leg" RELATED INCONSISTENT [FMA:24979, MESH:A.01.378.610.500] "lower extremity middle limb segment" EXACT [OBOL:automatic] "lower extremity zeugopod" EXACT [OBOL:automatic] "lower leg" EXACT [] "middle limb segment of hind limb" EXACT [OBOL:automatic] "middle limb segment of hindlimb" EXACT [OBOL:automatic] "posterior curral region" EXACT [FMA:24984] "posterior leg region" EXACT [FMA:24984] "posterior part of leg" EXACT [FMA:24984] "posterior region of leg" EXACT [FMA:24984] "regio cruris posterior" EXACT [FMA:24984, FMA:TA] "regio surae" EXACT [FMA:24984, FMA:TA] "shank" EXACT [VSAO:0005060] "sura" EXACT [FMA:24984, FMA:TA] "sural region" EXACT [FMA:24984] "zeugopod of hind limb" EXACT [OBOL:automatic] "zeugopod of hindlimb" EXACT [OBOL:automatic] | ||
| Comments: | note that FMA:24979 denotes the middle segment (zeugopod), its placement here is correct. See obo-anatomy archives for discussion // Naming conventions for pod terms under discussion within phenoscape group. TODO - add distinct term for skeleton and place AAO class here |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002471(zeugopod),UBERON:0008784(lower limb segment) |
|---|---|
| part_of: | UBERON:0002103(hindlimb),UBERON:0000978(leg),UBERON:0002103(hindlimb) |
Children
| part of: | UBERON:0001665 (triceps surae),UBERON:0004256 (hindlimb zeugopod muscle),UBERON:0004270 (lower leg connective tissue),UBERON:0006067 (musculature of hindlimb zeugopod) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10264-104D3
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10310-104I4
- 10320-105A5
- 10338-105C5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003823 (hindlimb zeugopod), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:79759687..79759690,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr10:79759687..79759690, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:76859417..76859418,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr22:25535147..25535150,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:97176812..97176813,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr10:97176812..97176813, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr11:3691037..3691040,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:186423235..186423240,-#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr4:186423235..186423240, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:85166508..85166512,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr22:25535147..25535150,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr22:25535147..25535150, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr7:128483294..128483304,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr2:179396370..179396375,-#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr10:97176812..97176813,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr10:97176812..97176813, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:179396370..179396375,-#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr2:179396370..179396375, - |
| 5.42e-195 | FFCP PHASE2:Hg19::chr2:76859417..76859418,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr2:76859417..76859418, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr11:3691037..3691040,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr11:3691037..3691040, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr10:79759687..79759690,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr10:79759687..79759690, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:85166508..85166512,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr4:85166508..85166512, + |
| 5.42e-195 | FFCP PHASE1:Hg19::chr7:128483294..128483304,+#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr7:128483294..128483304, + |
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:186423235..186423240,-#_ee24f51208c1dbfa79b0b3482830fbd1 | p@chr4:186423235..186423240, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105987..168105994,+#_cb3abb206f9242008941ae007b75bddb | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:51335579..51335582,+#_cb3abb206f9242008941ae007b75bddb | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:145478051..145478060,-#_cb3abb206f9242008941ae007b75bddb | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152499727..152499734,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179514306..179514308,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104926..168104927,+#_cb3abb206f9242008941ae007b75bddb | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104676..168104679,+#_cb3abb206f9242008941ae007b75bddb | p104@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152520248..152520253,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179514306..179514308,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:179514306..179514308, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr3:188070178..188070183,+#_cb3abb206f9242008941ae007b75bddb | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:64069328..64069334,-#_cb3abb206f9242008941ae007b75bddb | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr6:33716557..33716600,-#_cb3abb206f9242008941ae007b75bddb | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152553958..152553964,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152499727..152499734,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152499727..152499734, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr7:66800928..66800936,+#_cb3abb206f9242008941ae007b75bddb | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168104926..168104927,+#_cb3abb206f9242008941ae007b75bddb | p108@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:114067922..114067931,-#_cb3abb206f9242008941ae007b75bddb | p@chr13:114067922..114067931, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152520248..152520253,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152520248..152520253, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:117747577..117747580,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:117747577..117747580, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152553958..152553964,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152553958..152553964, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr8:144542829..144542857,-#_cb3abb206f9242008941ae007b75bddb | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:137206180..137206187,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:175125123..175125125,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152534468..152534476,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152534468..152534476,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152534468..152534476, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:119487319..119487331,-#_cb3abb206f9242008941ae007b75bddb | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:172318159..172318160,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168106638..168106641,+#_cb3abb206f9242008941ae007b75bddb | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr13:51335579..51335582,+#_cb3abb206f9242008941ae007b75bddb | p@chr13:51335579..51335582, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr3:188070178..188070183,+#_cb3abb206f9242008941ae007b75bddb | p@chr3:188070178..188070183, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr13:114067922..114067931,-#_cb3abb206f9242008941ae007b75bddb | p@chr13:114067922..114067931, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr1:119487319..119487331,-#_cb3abb206f9242008941ae007b75bddb | p@chr1:119487319..119487331, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr15:51060095..51060101,+#_cb3abb206f9242008941ae007b75bddb | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:64069328..64069334,-#_cb3abb206f9242008941ae007b75bddb | p7@FLJ36848 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr6:33716557..33716600,-#_cb3abb206f9242008941ae007b75bddb | p@chr6:33716557..33716600, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168102721..168102729,+#_cb3abb206f9242008941ae007b75bddb | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:117747577..117747580,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:117747577..117747580, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168106638..168106641,+#_cb3abb206f9242008941ae007b75bddb | p93@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105362..168105368,+#_cb3abb206f9242008941ae007b75bddb | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr22:36000901..36000903,-#_cb3abb206f9242008941ae007b75bddb | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:175125123..175125125,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:175125123..175125125, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168102721..168102729,+#_cb3abb206f9242008941ae007b75bddb | p77@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:179399371..179399376,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr8:144542829..144542857,-#_cb3abb206f9242008941ae007b75bddb | p@chr8:144542829..144542857, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr22:36000901..36000903,-#_cb3abb206f9242008941ae007b75bddb | p@chr22:36000901..36000903, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:168105362..168105368,+#_cb3abb206f9242008941ae007b75bddb | p46@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr7:66800928..66800936,+#_cb3abb206f9242008941ae007b75bddb | p1@ENST00000430244, p1@uc003tvu.2 |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:179399371..179399376,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:179399371..179399376, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr5:172318159..172318160,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:172318159..172318160, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr15:51060095..51060101,+#_cb3abb206f9242008941ae007b75bddb | p@chr15:51060095..51060101, + |
| 9.37e-99 | FFCP PHASE1:Hg19::chr2:152525581..152525588,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr5:137206180..137206187,+#_cb3abb206f9242008941ae007b75bddb | p@chr5:137206180..137206187, + |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168105987..168105994,+#_cb3abb206f9242008941ae007b75bddb | p54@XIRP2 |
| 9.37e-99 | FFCP PHASE2:Hg19::chr1:145478051..145478060,-#_cb3abb206f9242008941ae007b75bddb | p@chr1:145478051..145478060, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:152525581..152525588,-#_cb3abb206f9242008941ae007b75bddb | p@chr2:152525581..152525588, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr2:168104676..168104679,+#_cb3abb206f9242008941ae007b75bddb | p104@XIRP2 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:179656442..179656451,-#_121732fd3c652bd7da1d82f46db321af | p@chr2:179656442..179656451, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:97037060..97037066,-#_121732fd3c652bd7da1d82f46db321af | p@chr10:97037060..97037066, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:69168368..69168389,-#_121732fd3c652bd7da1d82f46db321af | p@chr3:69168368..69168389, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:69653866..69653876,+#_121732fd3c652bd7da1d82f46db321af | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:122884464..122884467,-#_121732fd3c652bd7da1d82f46db321af | p38@CLIP1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr10:29918007..29918031,-#_121732fd3c652bd7da1d82f46db321af | p@chr10:29918007..29918031, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr10:29918007..29918031,-#_121732fd3c652bd7da1d82f46db321af | p@chr10:29918007..29918031, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr5:95180155..95180172,+#_121732fd3c652bd7da1d82f46db321af | p@chr5:95180155..95180172, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:35732964..35732965,+#_121732fd3c652bd7da1d82f46db321af | p@chr3:35732964..35732965, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr18:8608021..8608050,+#_121732fd3c652bd7da1d82f46db321af | p@chr18:8608021..8608050, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr10:97037060..97037066,-#_121732fd3c652bd7da1d82f46db321af | p@chr10:97037060..97037066, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:69653866..69653876,+#_121732fd3c652bd7da1d82f46db321af | p@chr12:69653866..69653876, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:29398214..29398229,+#_121732fd3c652bd7da1d82f46db321af | p27@CLIP4 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr12:102079632..102079647,-#_121732fd3c652bd7da1d82f46db321af | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr18:8608021..8608050,+#_121732fd3c652bd7da1d82f46db321af | p@chr18:8608021..8608050, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr6:125535391..125535409,+#_121732fd3c652bd7da1d82f46db321af | p@chr6:125535391..125535409, + |
| 2.55e-98 | FFCP PHASE1:Hg19::chr3:46924232..46924241,+#_121732fd3c652bd7da1d82f46db321af | p@chr3:46924232..46924241, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:122884464..122884467,-#_121732fd3c652bd7da1d82f46db321af | p38@CLIP1 |
| 2.55e-98 | FFCP PHASE2:Hg19::chr12:102079632..102079647,-#_121732fd3c652bd7da1d82f46db321af | p@chr12:102079632..102079647, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:168102459..168102468,+#_121732fd3c652bd7da1d82f46db321af | p73@XIRP2 |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:152566311..152566321,-#_121732fd3c652bd7da1d82f46db321af | p@chr2:152566311..152566321, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr22:26299595..26299605,+#_121732fd3c652bd7da1d82f46db321af | p@chr22:26299595..26299605, + |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:152566311..152566321,-#_121732fd3c652bd7da1d82f46db321af | p@chr2:152566311..152566321, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr2:179656442..179656451,-#_121732fd3c652bd7da1d82f46db321af | p@chr2:179656442..179656451, - |
| 2.55e-98 | FFCP PHASE2:Hg19::chr3:69168368..69168389,-#_121732fd3c652bd7da1d82f46db321af | p@chr3:69168368..69168389, - |
| 2.55e-98 | FFCP PHASE1:Hg19::chr2:168102459..168102468,+#_121732fd3c652bd7da1d82f46db321af | p73@XIRP2 |
