CL:0002622: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=prostate stromal cell | |name=prostate stromal cell | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date=2011-03-14T02:11:10Z | |obo_creation_date=2011-03-14T02:11:10Z | ||
|part_of=UBERON:0002367 | |part_of=UBERON:0002367 | ||
Latest revision as of 16:46, 12 September 2014
| Name: | prostate stromal cell | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "A stromal cell of the prostate." [GOC:tfm] | ||
| Xrefs: |
| ||
| Created by: | tmeehan | ||
| Creation date: | 2011-03-14T02:11:10Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000499(stromal cell) |
|---|---|
| part_of: | UBERON:0002367(prostate gland) |
Children
| derives from: | FF:0000277 (human prostate stromal cell sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11332-117E9 (Prostate Stromal Cells, donor2)
- 11405-118E1 (Prostate Stromal Cells, donor3)
Mouse (Mus musculus)
- 11254-116F3 (Prostate Stromal Cells, donor1)
- 11332-117E9 (Prostate Stromal Cells, donor2)
- 11405-118E1 (Prostate Stromal Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002622 (prostate stromal cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 6.24e-88 | FFCP PHASE1:Hg19::chr4:120437504..120437512,-#_524ff9a69c508bdca8ebf46218341d3d | p@chr4:120437504..120437512, - |
| 6.24e-88 | FFCP PHASE2:Hg19::chr4:120437504..120437512,-#_524ff9a69c508bdca8ebf46218341d3d | p@chr4:120437504..120437512, - |
| 7.51e-74 | FFCP PHASE2:Hg19::chr14:33088589..33088594,+#_642651903218edc2c54e35be0d8a23c5 | p@chr14:33088589..33088594, + |
| 7.51e-74 | FFCP PHASE1:Hg19::chr14:33088589..33088594,+#_642651903218edc2c54e35be0d8a23c5 | p@chr14:33088589..33088594, + |
| 1.71e-66 | FFCP PHASE1:Hg19::chr4:120546882..120546885,-#_a4401e2ce99e8e17dd55fec567032796 | p@chr4:120546882..120546885, - |
| 1.71e-66 | FFCP PHASE2:Hg19::chr4:120546882..120546885,-#_a4401e2ce99e8e17dd55fec567032796 | p@chr4:120546882..120546885, - |
| 1.05e-45 | FFCP PHASE1:Hg19::chr1:246147829..246147864,-#_9cf7e44ffe981d649ea4bc918bc95cc5 | p@chr1:246147829..246147864, - |
| 1.05e-45 | FFCP PHASE2:Hg19::chr1:246147829..246147864,-#_9cf7e44ffe981d649ea4bc918bc95cc5 | p@chr1:246147829..246147864, - |
| 1.49e-38 | FFCP PHASE1:Hg19::chr3:123518853..123518862,-#_ab83cbed65a5aee3ec8c0f6f8435ddc3 | p48@MYLK |
| 1.49e-38 | FFCP PHASE2:Hg19::chr3:123518853..123518862,-#_ab83cbed65a5aee3ec8c0f6f8435ddc3 | p48@MYLK |
| 1.8e-38 | FFCP PHASE1:Hg19::chr4:120549931..120549938,-#_ac4dcdb09243f8557851338bd0bc5cfa | p21@PDE5A |
| 1.8e-38 | FFCP PHASE2:Hg19::chr4:120549931..120549938,-#_ac4dcdb09243f8557851338bd0bc5cfa | p21@PDE5A |
| 1.11e-35 | FFCP PHASE1:Hg19::chr7:136759451..136759469,+#_8daa286727bef2eb00c4ca551f6a2ffe | p@chr7:136759451..136759469, + |
| 1.11e-35 | FFCP PHASE2:Hg19::chr7:136759451..136759469,+#_8daa286727bef2eb00c4ca551f6a2ffe | p@chr7:136759451..136759469, + |
| 1.47e-30 | FFCP PHASE2:Hg19::chr12:52473502..52473510,+#_3da3629b8e19260555f73235acd7a8b3 | p2@ENST00000546390, p2@uc009zme.1 |
| 1.47e-30 | FFCP PHASE1:Hg19::chr12:52473502..52473510,+#_3da3629b8e19260555f73235acd7a8b3 | p2@ENST00000546390, p2@uc009zme.1 |
| 1.98e-30 | FFCP PHASE1:Hg19::chr4:177190139..177190150,-#_9e28fe3520da3a1bf0bc89fb7cf9a115 | p6@ASB5 |
| 1.98e-30 | FFCP PHASE2:Hg19::chr4:177190139..177190150,-#_9e28fe3520da3a1bf0bc89fb7cf9a115 | p6@ASB5 |
| 1.06e-27 | FFCP PHASE2:Hg19::chr2:238092965..238092980,-#_904cbff250721946258ab51dfb30abc4 | p@chr2:238092965..238092980, - |
| 1.06e-27 | FFCP PHASE1:Hg19::chr2:238092965..238092980,-#_904cbff250721946258ab51dfb30abc4 | p@chr2:238092965..238092980, - |
| 7.93e-25 | FFCP PHASE1:Hg19::chr7:81319728..81319744,-#_445d3922b8e8290b43841f12936e39a2 | p@chr7:81319728..81319744, - |
| 7.93e-25 | FFCP PHASE2:Hg19::chr7:81319728..81319744,-#_445d3922b8e8290b43841f12936e39a2 | p@chr7:81319728..81319744, - |
| 4.97e-24 | FFCP PHASE1:Hg19::chr4:120549834..120549846,-#_5f6b88e37bd09ae6c19e78f320ec15fb | p15@PDE5A |
| 4.97e-24 | FFCP PHASE2:Hg19::chr4:120549834..120549846,-#_5f6b88e37bd09ae6c19e78f320ec15fb | p15@PDE5A |
| 2.46e-23 | FFCP PHASE1:Hg19::chr3:123518704..123518728,-#_1d66563ba29ddde72efdd9fe3cdacb34 | p28@MYLK |
| 2.46e-23 | FFCP PHASE2:Hg19::chr3:123518704..123518728,-#_1d66563ba29ddde72efdd9fe3cdacb34 | p28@MYLK |
| 3.27e-23 | FFCP PHASE1:Hg19::chr2:203560192..203560201,+#_33ca6228a574acb15a4dfc377fdc004a | p11@FAM117B |
| 3.27e-23 | FFCP PHASE2:Hg19::chr2:203560192..203560201,+#_33ca6228a574acb15a4dfc377fdc004a | p11@FAM117B |
| 4.09e-23 | FFCP PHASE2:Hg19::chr1:118363660..118363674,-#_b583b6852862645d04e7611b549c2de7 | p@chr1:118363660..118363674, - |
| 4.09e-23 | FFCP PHASE1:Hg19::chr1:118363660..118363674,-#_b583b6852862645d04e7611b549c2de7 | p@chr1:118363660..118363674, - |
| 5.63e-23 | FFCP PHASE1:Hg19::chr4:1165260..1165276,-#_b9f5a42233795c46ad1b2518047cfef0 | p17@SPON2 |
| 5.63e-23 | FFCP PHASE2:Hg19::chr4:1165260..1165276,-#_b9f5a42233795c46ad1b2518047cfef0 | p17@SPON2 |
| 8.19e-23 | FFCP PHASE1:Hg19::chr21:46767473..46767491,+#_88b69e0428a99eeec144d608f9f1aa8e | p@chr21:46767473..46767491, + |
| 8.19e-23 | FFCP PHASE2:Hg19::chr21:46767473..46767491,+#_88b69e0428a99eeec144d608f9f1aa8e | p@chr21:46767473..46767491, + |
| 1.72e-22 | FFCP PHASE1:Hg19::chr8:119945232..119945244,-#_8f5f6b40ee5d23d4329283e9332cdde1 | p8@TNFRSF11B |
| 1.72e-22 | FFCP PHASE2:Hg19::chr8:119945232..119945244,-#_8f5f6b40ee5d23d4329283e9332cdde1 | p8@TNFRSF11B |
| 8.23e-22 | FFCP PHASE1:Hg19::chr3:123518925..123518939,-#_bb6c6de7e482dc129a6eaa391d816e36 | p29@MYLK |
| 8.23e-22 | FFCP PHASE2:Hg19::chr3:123518925..123518939,-#_bb6c6de7e482dc129a6eaa391d816e36 | p29@MYLK |
| 2.41e-21 | FFCP PHASE2:Hg19::chr4:120548828..120548836,-#_55f2a522030ceadd76ad026e2cff1ed3 | p17@PDE5A |
| 2.41e-21 | FFCP PHASE1:Hg19::chr4:120548828..120548836,-#_55f2a522030ceadd76ad026e2cff1ed3 | p17@PDE5A |
| 5.43e-21 | FFCP PHASE1:Hg19::chr8:120079417..120079436,+#_fa52ed84ae8dc1d46f5986552486a064 | p2@COLEC10 |
| 5.43e-21 | FFCP PHASE2:Hg19::chr8:120079417..120079436,+#_fa52ed84ae8dc1d46f5986552486a064 | p2@COLEC10 |
| 8.16e-21 | FFCP PHASE2:Hg19::chr18:20275091..20275099,+#_36fdc0ef964a925b3b8617060392454d | p@chr18:20275091..20275099, + |
| 8.16e-21 | FFCP PHASE1:Hg19::chr18:20275091..20275099,+#_36fdc0ef964a925b3b8617060392454d | p@chr18:20275091..20275099, + |
| 3.12e-20 | FFCP PHASE1:Hg19::chr3:170150547..170150552,+#_ae0d1326dbe731c3a1f5af29413789cf | p@chr3:170150547..170150552, + |
| 3.12e-20 | FFCP PHASE2:Hg19::chr3:170150547..170150552,+#_ae0d1326dbe731c3a1f5af29413789cf | p@chr3:170150547..170150552, + |
| 6.5e-20 | FFCP PHASE2:Hg19::chr12:89842992..89843005,-#_034dcc0fe8371cff74e0ff91ac17da32 | p@chr12:89842992..89843005, - |
| 6.5e-20 | FFCP PHASE1:Hg19::chr12:89842992..89843005,-#_034dcc0fe8371cff74e0ff91ac17da32 | p@chr12:89842992..89843005, - |
| 7.16e-20 | FFCP PHASE2:Hg19::chr14:52066745..52066774,-#_b94e8396f522e6d1ea5b5beafb94987f | p2@ENST00000556617 |
| 7.16e-20 | FFCP PHASE1:Hg19::chr14:52066745..52066774,-#_b94e8396f522e6d1ea5b5beafb94987f | p2@ENST00000556617 |
| 8.96e-20 | FFCP PHASE2:Hg19::chr9:101832450..101832468,+#_f2109dafe3ba8e2e15021b06d61ed454 | p@chr9:101832450..101832468, + |
| 8.96e-20 | FFCP PHASE1:Hg19::chr9:101832450..101832468,+#_f2109dafe3ba8e2e15021b06d61ed454 | p@chr9:101832450..101832468, + |
| 5.54e-19 | FFCP PHASE2:Hg19::chr14:54418733..54418774,-#_f8544b8b13646f515b65b048a69da2b2 | p7@BMP4 |
| 5.54e-19 | FFCP PHASE1:Hg19::chr14:54418733..54418774,-#_f8544b8b13646f515b65b048a69da2b2 | p7@BMP4 |
| 6.63e-19 | FFCP PHASE1:Hg19::chr2:114300263..114300269,-#_8d43b76a95ce45d45ca76b526b47098f | p1@ENST00000416758 |
| 6.63e-19 | FFCP PHASE2:Hg19::chr2:114300263..114300269,-#_8d43b76a95ce45d45ca76b526b47098f | p1@ENST00000416758 |
| 1.04e-18 | FFCP PHASE1:Hg19::chr3:158390171..158390180,-#_e232701eeab504681392eff4bd8607bf | p3@LXN |
| 1.04e-18 | FFCP PHASE2:Hg19::chr3:158390171..158390180,-#_e232701eeab504681392eff4bd8607bf | p3@LXN |
| 1.04e-18 | FFCP PHASE2:Hg19::chr1:21025019..21025038,-#_e232701eeab504681392eff4bd8607bf | p8@KIF17 |
| 1.04e-18 | FFCP PHASE1:Hg19::chr1:21025019..21025038,-#_e232701eeab504681392eff4bd8607bf | p8@KIF17 |
| 1.36e-18 | FFCP PHASE2:Hg19::chr16:86547373..86547391,+#_8450b10fb1476d3cb0f6e46a109addac | p@chr16:86547373..86547391, + |
| 1.36e-18 | FFCP PHASE1:Hg19::chr16:86547373..86547391,+#_8450b10fb1476d3cb0f6e46a109addac | p@chr16:86547373..86547391, + |
| 8.0e-18 | FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_5d2d14b2573dadc1945cc33ec59752e9 | p8@TCF21 |
| 8.0e-18 | FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_5d2d14b2573dadc1945cc33ec59752e9 | p8@TCF21 |
| 1.08e-17 | FFCP PHASE2:Hg19::chr16:86229916..86229943,+#_d10922f7a147c1fa477b07a4f07b1577 | p@chr16:86229916..86229943, + |
| 1.08e-17 | FFCP PHASE1:Hg19::chr16:86229916..86229943,+#_d10922f7a147c1fa477b07a4f07b1577 | p@chr16:86229916..86229943, + |
| 1.6e-17 | FFCP PHASE2:Hg19::chr9:101706279..101706284,+#_cc0669b93e9be0db6ddb085794f12f90 | p13@COL15A1 |
| 1.6e-17 | FFCP PHASE1:Hg19::chr9:101706279..101706284,+#_cc0669b93e9be0db6ddb085794f12f90 | p13@COL15A1 |
| 1.7e-17 | FFCP PHASE2:Hg19::chr6:64517213..64517228,+#_de7829c5c24c1dac9329ed509d843008 | p@chr6:64517213..64517228, + |
| 1.7e-17 | FFCP PHASE1:Hg19::chr6:64517213..64517228,+#_de7829c5c24c1dac9329ed509d843008 | p@chr6:64517213..64517228, + |
| 1.79e-17 | FFCP PHASE2:Hg19::chr4:1165106..1165131,-#_fdd09674d1b429e8fff9a41336665590 | p15@SPON2 |
| 1.79e-17 | FFCP PHASE1:Hg19::chr4:1165106..1165131,-#_fdd09674d1b429e8fff9a41336665590 | p15@SPON2 |
| 3.03e-17 | FFCP PHASE1:Hg19::chr8:120079478..120079499,+#_324d4333e3bc8365b737a4ee4451c45c | p1@COLEC10 |
| 3.03e-17 | FFCP PHASE2:Hg19::chr8:120079478..120079499,+#_324d4333e3bc8365b737a4ee4451c45c | p1@COLEC10 |
| 3.48e-17 | FFCP PHASE1:Hg19::chr3:123518900..123518913,-#_3c619fa4ce5faea50b041a4161de7dcb | p18@MYLK |
| 3.48e-17 | FFCP PHASE2:Hg19::chr3:123518900..123518913,-#_3c619fa4ce5faea50b041a4161de7dcb | p18@MYLK |
| 5.22e-17 | FFCP PHASE2:Hg19::chr10:28033614..28033628,-#_c0c4aa06305088d455bc8f6bb078f387 | p@chr10:28033614..28033628, - |
| 5.22e-17 | FFCP PHASE1:Hg19::chr10:28033614..28033628,-#_c0c4aa06305088d455bc8f6bb078f387 | p@chr10:28033614..28033628, - |
| 1.23e-16 | FFCP PHASE1:Hg19::chr3:123458560..123458569,-#_e7706e2c116b076605e7e89c10afe401 | p@chr3:123458560..123458569, - |
| 1.23e-16 | FFCP PHASE2:Hg19::chr3:123458560..123458569,-#_e7706e2c116b076605e7e89c10afe401 | p@chr3:123458560..123458569, - |
| 1.97e-16 | FFCP PHASE1:Hg19::chr3:123519062..123519090,-#_9acfe27e135bacab650e5b70cb90d7b4 | p14@MYLK |
| 1.97e-16 | FFCP PHASE2:Hg19::chr3:123519062..123519090,-#_9acfe27e135bacab650e5b70cb90d7b4 | p14@MYLK |
| 2.26e-16 | FFCP PHASE2:Hg19::chr1:21766691..21766715,+#_a29e7ef1c8506af26f1e933dce24a0ce | p3@NBPF3 |
| 2.26e-16 | FFCP PHASE1:Hg19::chr1:21766691..21766715,+#_a29e7ef1c8506af26f1e933dce24a0ce | p3@NBPF3 |
| 2.82e-16 | FFCP PHASE1:Hg19::chr16:86256667..86256687,-#_2dc479150bd42ce8cfd09dede3516d76 | p@chr16:86256667..86256687, - |
| 2.82e-16 | FFCP PHASE2:Hg19::chr16:86256667..86256687,-#_2dc479150bd42ce8cfd09dede3516d76 | p@chr16:86256667..86256687, - |
| 3.98e-16 | FFCP PHASE1:Hg19::chr4:1164305..1164316,-#_f72073ffe8b7a8682d607ef298f9285c | p@chr4:1164305..1164316, - |
| 3.98e-16 | FFCP PHASE2:Hg19::chr4:1164305..1164316,-#_f72073ffe8b7a8682d607ef298f9285c | p@chr4:1164305..1164316, - |
| 4.02e-16 | FFCP PHASE1:Hg19::chr4:1165755..1165774,-#_f986ea15bbd99bda362fa72991f7ab64 | p12@SPON2 |
| 4.02e-16 | FFCP PHASE2:Hg19::chr4:1165755..1165774,-#_f986ea15bbd99bda362fa72991f7ab64 | p12@SPON2 |
| 5.17e-16 | FFCP PHASE1:Hg19::chr2:28524175..28524215,+#_9ff41d1993a9bdd20d2a0615aa6dfbaf | p@chr2:28524175..28524215, + |
| 5.17e-16 | FFCP PHASE2:Hg19::chr2:28524175..28524215,+#_9ff41d1993a9bdd20d2a0615aa6dfbaf | p@chr2:28524175..28524215, + |
| 6.63e-16 | FFCP PHASE2:Hg19::chr16:86542381..86542392,-#_97afa61d3f89ad6de04e635137212c6b | p1@ENST00000499071 |
| 6.63e-16 | FFCP PHASE1:Hg19::chr16:86542381..86542392,-#_97afa61d3f89ad6de04e635137212c6b | p1@ENST00000499071 |
| 1.22e-15 | FFCP PHASE1:Hg19::chr7:136553573..136553582,+#_552226e6a136a889cf992b9bd665dd47 | p6@CHRM2 |
| 1.22e-15 | FFCP PHASE2:Hg19::chr7:136553573..136553582,+#_552226e6a136a889cf992b9bd665dd47 | p6@CHRM2 |
| 2.63e-15 | FFCP PHASE1:Hg19::chr7:79082186..79082203,+#_c5cb828e67d0d03e7c930f9adeff5505 | p8@MAGI2-AS3 |
| 2.63e-15 | FFCP PHASE2:Hg19::chr7:79082186..79082203,+#_c5cb828e67d0d03e7c930f9adeff5505 | p8@MAGI2-AS3 |
| 3.11e-15 | FFCP PHASE1:Hg19::chr3:123518799..123518836,-#_9d3aafd1913506bc1ed62eeb508c6a8d | p16@MYLK |
| 3.11e-15 | FFCP PHASE2:Hg19::chr3:123518799..123518836,-#_9d3aafd1913506bc1ed62eeb508c6a8d | p16@MYLK |
