FFCP PHASE1:Hg19::chr10:135207602..135207618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=92170 | |EntrezGene=entrezgene:92170 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=32159 | |HGNC=HGNC:32159 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt=Q9BT17 | |UniProt=uniprot:Q9BT17 | ||
|association_with_transcript=-2bp_to_NM_138384,uc001lnd.2_5end | |association_with_transcript=-2bp_to_NM_138384,uc001lnd.2_5end | ||
|cluster_id=chr10:135207602..135207618,+ | |||
|description=CAGE_peak_3_at_MTG1_5end | |description=CAGE_peak_3_at_MTG1_5end | ||
|id=chr10:135207602..135207618,+ | |id=chr10:135207602..135207618,+ |
Revision as of 11:53, 23 July 2015
Short description: | p3@MTG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MTG1_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_NM_138384, uc001lnd.2_5end |
EntrezGene: | 92170 |
HGNC: | 32159 |
UniProt: | Q9BT17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@MTG1 |
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0
5
10
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20
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 1.64e-16 | 45 |
endothelial cell | 4.10e-16 | 36 |
endothelial cell of vascular tree | 2.32e-13 | 24 |
blood vessel endothelial cell | 2.50e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.50e-11 | 18 |
epithelial cell of nephron | 2.96e-09 | 15 |
kidney cortical cell | 3.25e-08 | 12 |
renal cortical epithelial cell | 3.25e-08 | 12 |
lining cell | 3.68e-08 | 58 |
barrier cell | 3.68e-08 | 58 |
Showing 1 to 10 of 16 entries
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.50e-11 | 18 |
endothelium | 2.50e-11 | 18 |
cardiovascular system endothelium | 2.50e-11 | 18 |
nephron epithelium | 2.96e-09 | 15 |
renal tubule | 2.96e-09 | 15 |
nephron tubule | 2.96e-09 | 15 |
nephron | 2.96e-09 | 15 |
uriniferous tubule | 2.96e-09 | 15 |
nephrogenic mesenchyme | 2.96e-09 | 15 |
simple squamous epithelium | 1.98e-08 | 22 |
Showing 1 to 10 of 19 entries