FFCP PHASE1:Mm9::chrX:132133317..132133325,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=170722|HGNC=|MCL_coexpression_id=144|UniProt=Q80SZ6|association_with_transcript=-1bp_to_ENSMUST00000113163,uc009uhh.1_5end|description=CAGE_peak_1_at_Nxf7_5end|id=chrX:132133317..132133325,-|ontology_enrichment_celltype=CL:0000349!3.06e-07!3;CL:0000351!3.06e-07!3|ontology_enrichment_celltype_v019_2=CL:0000349,5.97e-33,3;CL:0000351,5.97e-33,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004923!1.19e-07!24;UBERON:0000160!1.77e-07!43;UBERON:0005631!1.85e-07!3;UBERON:0000478!1.85e-07!3;UBERON:0000158!1.85e-07!3;UBERON:0007023!2.33e-07!51;UBERON:0000358!3.06e-07!3;UBERON:0000307!3.06e-07!3;UBERON:0000344!9.89e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.67e-34,3;UBERON:0000478,3.67e-34,3;UBERON:0000158,3.67e-34,3;UBERON:0000358,5.97e-33,3;UBERON:0000307,5.97e-33,3;UBERON:0007010,5.97e-33,3;UBERON:0001987,3.06e-23,2;UBERON:0003124,3.06e-23,2;UBERON:0004340,3.06e-23,2;UBERON:0010147,2.32e-22,2;UBERON:0003937,2.32e-22,2;UBERON:0005399,2.32e-22,2;UBERON:0000305,1.20e-12,1;UBERON:0005795,3.81e-12,4;UBERON:0000995,3.81e-12,4;UBERON:0000998,4.30e-12,1;UBERON:0007194,4.30e-12,1;UBERON:0006868,4.30e-12,1;UBERON:0002367,5.53e-12,1;UBERON:0009846,5.53e-12,1;UBERON:0003353,5.53e-12,1;UBERON:0004902,5.53e-12,1;UBERON:0003820,5.53e-12,1;UBERON:0009847,5.53e-12,1;UBERON:0004175,1.01e-11,9;UBERON:0006554,3.64e-10,18;UBERON:0003975,6.57e-10,5;UBERON:0001008,1.19e-09,19;UBERON:0005156,3.78e-07,26;UBERON:0000990,3.78e-07,26|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6181634835156,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0,0,0,0.949058123089023,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33613611772018,10.591603543191,1.7642271844397,0,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,3.32978930061097,1.52513556236109,5.70807695637867,0,0,0,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p1@Nxf7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:170722 | |||
|HGNC= | |||
|MCL_coexpression_id=144 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q80SZ6 | |||
|association_with_transcript=-1bp_to_ENSMUST00000113163,uc009uhh.1_5end | |||
|cluster_id=chrX:132133317..132133325,- | |||
|description=CAGE_peak_1_at_Nxf7_5end | |||
|id=chrX:132133317..132133325,- | |||
|ontology_enrichment_celltype=CL:0000349!3.06e-07!3;CL:0000351!3.06e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,5.97e-33,3;CL:0000351,5.97e-33,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.19e-07!24;UBERON:0000160!1.77e-07!43;UBERON:0005631!1.85e-07!3;UBERON:0000478!1.85e-07!3;UBERON:0000158!1.85e-07!3;UBERON:0007023!2.33e-07!51;UBERON:0000358!3.06e-07!3;UBERON:0000307!3.06e-07!3;UBERON:0000344!9.89e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.67e-34,3;UBERON:0000478,3.67e-34,3;UBERON:0000158,3.67e-34,3;UBERON:0000358,5.97e-33,3;UBERON:0000307,5.97e-33,3;UBERON:0007010,5.97e-33,3;UBERON:0001987,3.06e-23,2;UBERON:0003124,3.06e-23,2;UBERON:0004340,3.06e-23,2;UBERON:0010147,2.32e-22,2;UBERON:0003937,2.32e-22,2;UBERON:0005399,2.32e-22,2;UBERON:0000305,1.20e-12,1;UBERON:0005795,3.81e-12,4;UBERON:0000995,3.81e-12,4;UBERON:0000998,4.30e-12,1;UBERON:0007194,4.30e-12,1;UBERON:0006868,4.30e-12,1;UBERON:0002367,5.53e-12,1;UBERON:0009846,5.53e-12,1;UBERON:0003353,5.53e-12,1;UBERON:0004902,5.53e-12,1;UBERON:0003820,5.53e-12,1;UBERON:0009847,5.53e-12,1;UBERON:0004175,1.01e-11,9;UBERON:0006554,3.64e-10,18;UBERON:0003975,6.57e-10,5;UBERON:0001008,1.19e-09,19;UBERON:0005156,3.78e-07,26;UBERON:0000990,3.78e-07,26 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22940928106717,0,0,0.215471232685889,0.380046838912748,0.504060259519861,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6181634835156,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0.347648640384553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0,0,0.234526059981096,0,0,0.196764231747404,0.154267112887378,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0.330418782983798,0.264450566663544,0,0,0.257734922644187,0,0,0,0.949058123089023,0.164698954724011,0,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.159454768657487,0,0,0,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.33613611772018,10.591603543191,1.7642271844397,0,0.161464426695906,0,0.119372344003136,0,0.582961673259701,0,0,0,0,0,0,0,0.169978429993855,0.139951452323658,0,0,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0,0,0,0,0,0,3.32978930061097,1.52513556236109,5.70807695637867,0,0,0,0,3.00943262421218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Nxf7 | |||
}} |
Revision as of 00:06, 6 August 2015
Short description: | p1@Nxf7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nxf7_5end |
Coexpression cluster: | MCL_coexpression_mm9:144 |
Association with transcript: | -1bp_to_ENSMUST00000113163, uc009uhh.1_5end |
EntrezGene: | 170722 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 5.97e-33 | 3 |
trophoblast cell | 5.97e-33 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.67e-34 | 3 |
extraembryonic structure | 3.67e-34 | 3 |
membranous layer | 3.67e-34 | 3 |
blastocyst | 5.97e-33 | 3 |
blastula | 5.97e-33 | 3 |
cleaving embryo | 5.97e-33 | 3 |
placenta | 3.06e-23 | 2 |
chorion | 3.06e-23 | 2 |
allantois | 3.06e-23 | 2 |
male accessory sex gland | 2.32e-22 | 2 |
sex gland | 2.32e-22 | 2 |
male reproductive gland | 2.32e-22 | 2 |
amnion | 1.20e-12 | 1 |
embryonic uterus | 3.81e-12 | 4 |
uterus | 3.81e-12 | 4 |
seminal vesicle | 4.30e-12 | 1 |
vesicular gland | 4.30e-12 | 1 |
seminal fluid secreting gland | 4.30e-12 | 1 |
prostate gland | 5.53e-12 | 1 |
embryonic cloacal epithelium | 5.53e-12 | 1 |
epithelium of hindgut | 5.53e-12 | 1 |
urogenital sinus epithelium | 5.53e-12 | 1 |
prostate bud | 5.53e-12 | 1 |
prostate field | 5.53e-12 | 1 |
internal genitalia | 1.01e-11 | 9 |
urinary system structure | 3.64e-10 | 18 |
internal female genitalia | 6.57e-10 | 5 |
renal system | 1.19e-09 | 19 |
reproductive structure | 3.78e-07 | 26 |
reproductive system | 3.78e-07 | 26 |