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FFCP PHASE1:Mm9::chr9:62705892..62705945,+: Difference between revisions

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{{FFCP|EntrezGene=75600|HGNC=|MCL_coexpression_id=12|UniProt=Q91WQ9,E9Q1L1|association_with_transcript=0bp_to_ENSMUST00000034777,ENSMUST00000163820,NM_001102468,NM_138304,uc009qao.1,uc009qap.1,uc009qaq.1_5end|description=CAGE_peak_1_at_Calml4_5end|id=chr9:62705892..62705945,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002563,7.94e-07,9;CL:0002251,7.94e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.50e-14!43;UBERON:0005409!2.65e-14!59;UBERON:0000344!1.37e-10!15;UBERON:0001242!2.55e-09!13;UBERON:0000060!2.55e-09!13;UBERON:0001262!2.55e-09!13;UBERON:0004786!2.55e-09!13;UBERON:0000485!7.25e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.16e-18,31;UBERON:0005409,3.66e-16,47;UBERON:0000344,7.32e-11,15;UBERON:0001242,1.48e-09,13;UBERON:0001262,1.48e-09,13;UBERON:0004786,1.48e-09,13;UBERON:0000485,4.66e-08,11;UBERON:0003350,7.94e-07,9;UBERON:0004808,7.94e-07,9;UBERON:0001277,7.94e-07,9|phase1_expression=245.988629152964,358.397743645624,293.92950864564,282.804037571886,214.383372417037,134.303417529512,126.384438562179,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0,0,19.8150866051993,0.198581902401771,0,219.349611649761,220.691728386618,433.54513290684,336.425119000237,255.548881965464,367.505293228627,316.549842978473,195.566310397979,4.44521471421742,0.61506478758457,0,142.403848537378,160.915136707021,150.268646209104,0,0,0,0,0,0,2.26614272356039,1.72340783073175,4.58866880404204,0.782391344348039,1.52617609466313,7.46933021297204,9.3326351555656,2.79972843250725,5.75010257459886,0,0,0,0.257259436035947,2.0057340795713,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0.889294796111139,0,0.988866362566974,0,3.59520132622086,16.5213871288268,0,0,0,2.57085885963423,3.09215957332259,0.979926393719632,0.0958454710182364,0.919218786610021,3.30347642998166,1.65993539510744,1.38245879930619,0.923204014111357,1.73826522844578,3.12548022334056,0.279182999001381,5.06486349028512,3.66715794664344,3.24091444021034,4.6982654663704,1.86399445825301,0.151452386666368,0.0755715601067855,35.073603132903,9.46466264679525,0,0,0.649776417447669,0,32.4426610504347,19.7699174190547,24.9394564418754,21.9070536196411,173.51909316487,32.0816193535795,20.3844191765317,0,0,0,0.505524445014783,62.6869499657639,1.03575153458869,2.9688427812965,4.8575891494518,6.39377504455497,9.4552353874984,9.94769427647309,8.70156432804216,5.27799683584637,12.1125534189843,3.18118585223806,0,5.66183974815932,0.883366073841574,3.87900202508178,33.550517019262,6.14839673724249,3.77004072264219,174.477168707468,0,0,0,1.3481157546434,3.66000482254901,0,0.347648640384553,0,4.77912502486988,2.59586020908412,24.7469654156269,5.47390670684409,8.84529654517861,1.89397670297827,0,0.919608417733892,1.80062129805349,5.87748789559289,2.99360596265843,4.22775276940004,4.12287588062807,4.65666067330228,0.215567992932842,0.378212160335639,1.40760899331159,2.6303487891309,4.44875598760957,5.92028683087683,8.0255033199098,6.17006227137329,0,0,0,0,0.469052119962192,0.180062061461015,0,0.590292695242212,1.23413690309903,0.697601834251224,0.536546802799238,0.583826711835847,0.987359099480883,1.14917224855367,0.972825714550269,0.730999937126662,1.09775057645525,0.402619256281115,12.6173969138476,10.2904612379284,316.541194098478,285.606611996628,1.91959425481711,7.89604684325491,23.0672755766547,69.9841830442999,112.30091214166,123.836882599276,190.760682740894,181.49824810586,180.961350336194,170.505696539266,155.386377433939,136.620550115442,208.57321812908,181.218558661474,8.53505554288868,12.7958334122896,22.5415471346161,34.8243770615487,51.5913615865884,54.9163469741194,86.6972923973567,134.472844809418,150.404781272037,141.783341346149,3.85388415213294,0.166845105716094,0.786235980452812,0.224862112384854,0.405720242777006,1.4470629585145,1.2731292589071,3.16465751195892,3.89124544260085,39.5368434990837,24.4405951096503,49.8668869875795,32.7639556770289,11.8712072635143,3.76734568396016,1.4473305640901,20.1380977281599,2.4633883530163,3.09633455239849,3.56464680127895,2.11221223459652,4.02015017860358,8.56957107189649,6.04914308359176,5.51723004371669,6.64394068946325,4.14582398509466,9.17634562408133,10.1884139300878,8.38964539772767,0,0,0,0.551873492609465,3.05046120976805,0.586058432961016,14.7541450839008,3.02965112645248,0.631016438832513,0,0,0,0,0.283076530788832,0,0.876767573733936,0,0,8.80028528291265,7.65682095769198,15.1484872198826,14.1874305756381,0,2.18502572539483,2.41858845571801,3.96070667487386,2.95301892880773,6.45613810682248,42.3822400795883,6.5436071305951,9.62542921638748,3.47640433729398,4.21674434299995,2.06271086496374,1.70219802876894,0,2.58717367565509,6.43011105094777,7.80297028026004,8.38333442729732,8.55654907131029,4.26250928760439,1.64270195644597,2.54198485036584,3.30792597082443,3.46261131177108,2.9063596805263,2.77439454669517,0.835606408021955,1.47726809770555,194.126237195481,1.11255181206306,1.70870880797853,5.57244543500701,2.22233432843654,2.44878994106098,0.27338845544205,0.686334519619568,0.509935289981566,0.279902904647316,0.138199973804424,17.184071124272,3.00519193902079,5.08298667817122,18.3609079397062,11.2907679847813,19.8709933009022,11.3286050963249,15.0429289420111,7.59092231753686,131.170352971294,0,0,1.94371509857172,2.97825282822776,4.86127970860119,5.16639293910924,3.71703476079712,5.63314745499619,7.03103678157331,2.41176492179135,1.93267296660805,0.288030006257865,0.316011120628178,2.02725215290164,2.36235201479103,2.5984164595559,2.14832034800978,1.19208812868759,1.68273629327956,1.62458479892035,1.41353029927407,0.990688486514998,1.00826185136841,1.26695244961678,0.865906574762965,1.40252282617883,1.81384306892169,0,0,0.335769232728157,5.40930863290133,10.6979011007174,6.95976172215607,3.64426244434412,1.00314420807073,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,2.04880326904961,4.86213434136588,4.40187641518763,10.1113929647508,14.0015438515018,14.2164189494837,11.8740107548972,8.08631077644152,8.36481689637791,10.9403278003924,14.2335091354221,14.2776089862858,13.0952869218798,13.8125170472091,12.6313915279892,15.2398284166327,13.1867488257058,13.3951017322302,15.7719856097291,15.0854435235437,15.4983523465759,9.88355633099834,12.9870944973156,13.3691080468849,10.9756783723664,17.6256706663355,14.1236278399696,13.4674145197857,11.6262317761691,13.1010961559499,15.9600106836179,13.789378865551,11.1885834369062,3.99696924700713,17.0770074165148,13.7517474590911,8.41668661102911,7.0589254118245,1.62307484934295|short_description=p1@Calml4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:75600
|HGNC=
|MCL_coexpression_id=12
|TSSclassifier=NA
|UniProt=uniprot:Q91WQ9,uniprot:E9Q1L1
|association_with_transcript=0bp_to_ENSMUST00000034777,ENSMUST00000163820,NM_001102468,NM_138304,uc009qao.1,uc009qap.1,uc009qaq.1_5end
|cluster_id=chr9:62705892..62705945,+
|description=CAGE_peak_1_at_Calml4_5end
|id=chr9:62705892..62705945,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002563,7.94e-07,9;CL:0002251,7.94e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!2.50e-14!43;UBERON:0005409!2.65e-14!59;UBERON:0000344!1.37e-10!15;UBERON:0001242!2.55e-09!13;UBERON:0000060!2.55e-09!13;UBERON:0001262!2.55e-09!13;UBERON:0004786!2.55e-09!13;UBERON:0000485!7.25e-08!11
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.16e-18,31;UBERON:0005409,3.66e-16,47;UBERON:0000344,7.32e-11,15;UBERON:0001242,1.48e-09,13;UBERON:0001262,1.48e-09,13;UBERON:0004786,1.48e-09,13;UBERON:0000485,4.66e-08,11;UBERON:0003350,7.94e-07,9;UBERON:0004808,7.94e-07,9;UBERON:0001277,7.94e-07,9
|phase1_expression=245.988629152964,358.397743645624,293.92950864564,282.804037571886,214.383372417037,134.303417529512,126.384438562179,0,0,0,0,0,0,0,0.666219523631325,0.404950534779652,0,0.157731082679119,0,0,19.8150866051993,0.198581902401771,0,219.349611649761,220.691728386618,433.54513290684,336.425119000237,255.548881965464,367.505293228627,316.549842978473,195.566310397979,4.44521471421742,0.61506478758457,0,142.403848537378,160.915136707021,150.268646209104,0,0,0,0,0,0,2.26614272356039,1.72340783073175,4.58866880404204,0.782391344348039,1.52617609466313,7.46933021297204,9.3326351555656,2.79972843250725,5.75010257459886,0,0,0,0.257259436035947,2.0057340795713,0.515672092277442,0.809265843438391,1.05798195854407,0,0,0.889294796111139,0,0.988866362566974,0,3.59520132622086,16.5213871288268,0,0,0,2.57085885963423,3.09215957332259,0.979926393719632,0.0958454710182364,0.919218786610021,3.30347642998166,1.65993539510744,1.38245879930619,0.923204014111357,1.73826522844578,3.12548022334056,0.279182999001381,5.06486349028512,3.66715794664344,3.24091444021034,4.6982654663704,1.86399445825301,0.151452386666368,0.0755715601067855,35.073603132903,9.46466264679525,0,0,0.649776417447669,0,32.4426610504347,19.7699174190547,24.9394564418754,21.9070536196411,173.51909316487,32.0816193535795,20.3844191765317,0,0,0,0.505524445014783,62.6869499657639,1.03575153458869,2.9688427812965,4.8575891494518,6.39377504455497,9.4552353874984,9.94769427647309,8.70156432804216,5.27799683584637,12.1125534189843,3.18118585223806,0,5.66183974815932,0.883366073841574,3.87900202508178,33.550517019262,6.14839673724249,3.77004072264219,174.477168707468,0,0,0,1.3481157546434,3.66000482254901,0,0.347648640384553,0,4.77912502486988,2.59586020908412,24.7469654156269,5.47390670684409,8.84529654517861,1.89397670297827,0,0.919608417733892,1.80062129805349,5.87748789559289,2.99360596265843,4.22775276940004,4.12287588062807,4.65666067330228,0.215567992932842,0.378212160335639,1.40760899331159,2.6303487891309,4.44875598760957,5.92028683087683,8.0255033199098,6.17006227137329,0,0,0,0,0.469052119962192,0.180062061461015,0,0.590292695242212,1.23413690309903,0.697601834251224,0.536546802799238,0.583826711835847,0.987359099480883,1.14917224855367,0.972825714550269,0.730999937126662,1.09775057645525,0.402619256281115,12.6173969138476,10.2904612379284,316.541194098478,285.606611996628,1.91959425481711,7.89604684325491,23.0672755766547,69.9841830442999,112.30091214166,123.836882599276,190.760682740894,181.49824810586,180.961350336194,170.505696539266,155.386377433939,136.620550115442,208.57321812908,181.218558661474,8.53505554288868,12.7958334122896,22.5415471346161,34.8243770615487,51.5913615865884,54.9163469741194,86.6972923973567,134.472844809418,150.404781272037,141.783341346149,3.85388415213294,0.166845105716094,0.786235980452812,0.224862112384854,0.405720242777006,1.4470629585145,1.2731292589071,3.16465751195892,3.89124544260085,39.5368434990837,24.4405951096503,49.8668869875795,32.7639556770289,11.8712072635143,3.76734568396016,1.4473305640901,20.1380977281599,2.4633883530163,3.09633455239849,3.56464680127895,2.11221223459652,4.02015017860358,8.56957107189649,6.04914308359176,5.51723004371669,6.64394068946325,4.14582398509466,9.17634562408133,10.1884139300878,8.38964539772767,0,0,0,0.551873492609465,3.05046120976805,0.586058432961016,14.7541450839008,3.02965112645248,0.631016438832513,0,0,0,0,0.283076530788832,0,0.876767573733936,0,0,8.80028528291265,7.65682095769198,15.1484872198826,14.1874305756381,0,2.18502572539483,2.41858845571801,3.96070667487386,2.95301892880773,6.45613810682248,42.3822400795883,6.5436071305951,9.62542921638748,3.47640433729398,4.21674434299995,2.06271086496374,1.70219802876894,0,2.58717367565509,6.43011105094777,7.80297028026004,8.38333442729732,8.55654907131029,4.26250928760439,1.64270195644597,2.54198485036584,3.30792597082443,3.46261131177108,2.9063596805263,2.77439454669517,0.835606408021955,1.47726809770555,194.126237195481,1.11255181206306,1.70870880797853,5.57244543500701,2.22233432843654,2.44878994106098,0.27338845544205,0.686334519619568,0.509935289981566,0.279902904647316,0.138199973804424,17.184071124272,3.00519193902079,5.08298667817122,18.3609079397062,11.2907679847813,19.8709933009022,11.3286050963249,15.0429289420111,7.59092231753686,131.170352971294,0,0,1.94371509857172,2.97825282822776,4.86127970860119,5.16639293910924,3.71703476079712,5.63314745499619,7.03103678157331,2.41176492179135,1.93267296660805,0.288030006257865,0.316011120628178,2.02725215290164,2.36235201479103,2.5984164595559,2.14832034800978,1.19208812868759,1.68273629327956,1.62458479892035,1.41353029927407,0.990688486514998,1.00826185136841,1.26695244961678,0.865906574762965,1.40252282617883,1.81384306892169,0,0,0.335769232728157,5.40930863290133,10.6979011007174,6.95976172215607,3.64426244434412,1.00314420807073,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,2.04880326904961,4.86213434136588,4.40187641518763,10.1113929647508,14.0015438515018,14.2164189494837,11.8740107548972,8.08631077644152,8.36481689637791,10.9403278003924,14.2335091354221,14.2776089862858,13.0952869218798,13.8125170472091,12.6313915279892,15.2398284166327,13.1867488257058,13.3951017322302,15.7719856097291,15.0854435235437,15.4983523465759,9.88355633099834,12.9870944973156,13.3691080468849,10.9756783723664,17.6256706663355,14.1236278399696,13.4674145197857,11.6262317761691,13.1010961559499,15.9600106836179,13.789378865551,11.1885834369062,3.99696924700713,17.0770074165148,13.7517474590911,8.41668661102911,7.0589254118245,1.62307484934295
|short_description=p1@Calml4
}}

Revision as of 11:13, 5 August 2015

Short description:p1@Calml4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Calml4_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: 0bp_to_ENSMUST00000034777, ENSMUST00000163820, NM_001102468, NM_138304, uc009qao.1, uc009qap.1, uc009qaq.1_5end
EntrezGene:75600
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Calml4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G7245.99
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5358.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6293.93
CD326+ enterocyte, pool1.CNhs13542.11848-124I3282.80
CD326+ enterocyte, pool2.CNhs13197.11849-124I4214.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I7134.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I8126.38
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A319.82
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1219.35
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2220.69
GP2+ M cell, pool1.CNhs13228.11845-124H9433.55
GP2+ M cell, pool2.CNhs13231.11846-124I1336.43
GP2+ M cell, pool3.CNhs13240.11847-124I2255.55
Ileum epithelium, pool1.CNhs13199.10252-104B9367.51
Ileum epithelium, pool2.CNhs13232.10253-104C1316.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C8195.57
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I34.45
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F5142.40
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F6160.92
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F7150.27
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.27
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.72
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B34.59
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C39.33
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.80
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.81
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E816.52
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.98
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.92
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.67
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.24
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.86
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G335.07
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79.46
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A732.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I719.77
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E324.94
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I821.91
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G6173.52
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H132.08
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B662.69
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D72.97
adrenal gland, embryo E14.CNhs11038.406-44C54.86
adrenal gland, embryo E16.CNhs11004.1254-43D66.39
adrenal gland, embryo E17.CNhs11043.1263-45I19.46
adrenal gland, embryo E18.CNhs11026.1262-18F59.95
adrenal gland, neonate N00.CNhs11191.1311-23C18.70
adrenal gland, neonate N25.CNhs11223.1377-27I35.28
amnion, adult pregnant day17.5.CNhs10488.583-22A812.11
aorta, adult.CNhs10498.46-23H13.18
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F55.66
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C33.88
cecum, adult.CNhs10467.37-13H433.55
cerebellum, adult.CNhs10494.15-8B26.15
cerebellum, neonate N30.CNhs11135.1395-42I23.77
colon, adult.CNhs10468.36-18H7174.48
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.35
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F24.78
diencephalon, neonate N30.CNhs11201.1388-42B22.60
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B124.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B28.85
eyeball, adult.CNhs10484.31-12G41.89
eyeball, embryo E12.CNhs11016.345-16C60.00
eyeball, embryo E14.CNhs10521.399-16E20.92
eyeball, embryo E15.CNhs10593.426-16C91.80
eyeball, embryo E17.CNhs11023.1261-18D45.88
eyeball, neonate N00.CNhs11207.633-15C62.99
eyeball, neonate N01.CNhs11140.1532-43E74.23
eyeball, neonate N02.CNhs11205.1551-44G84.12
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E21.41
forelimb, embryo E14.CNhs10577.413-26A82.63
forelimb, embryo E15.CNhs11007.437-20E74.45
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B58.03
gonad, embryo E13.CNhs11044.1564-45I66.17
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.58
heart, neonate N03.CNhs11221.1349-25I20.99
heart, neonate N10.CNhs11118.749-24G11.15
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E812.62
hippocampus, neonate N00.CNhs11228.627-43G110.29
intestinal mucosa, adult.CNhs10506.860-29I3316.54
intestine, adult.CNhs10496.178-9A3285.61
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D57.90
intestine, embryo E15.CNhs10602.976-16D823.07
intestine, embryo E16.CNhs10585.463-22H469.98
intestine, embryo E17.CNhs10582.482-18D3112.30
intestine, embryo E18.CNhs10526.1289-20F7123.84
intestine, neonate N00.CNhs11126.644-26D1190.76
intestine, neonate N01.CNhs11192.1322-23E9181.50
intestine, neonate N06.CNhs11102.688-20B8180.96
intestine, neonate N07.CNhs11095.720-20F2170.51
intestine, neonate N10.CNhs11098.755-23A5155.39
intestine, neonate N20.CNhs11187.827-18D1136.62
intestine, neonate N25.CNhs11121.1352-25E3208.57
intestine, neonate N30.CNhs11131.1384-42G1181.22
kidney, embryo E14.CNhs10606.411-4I98.54
kidney, embryo E15.CNhs10997.434-16F812.80
kidney, embryo E16.CNhs10584.464-22A522.54
kidney, embryo E17.CNhs11028.483-18I234.82
kidney, embryo E18.CNhs11001.1288-20C751.59
kidney, neonate N00.CNhs11214.646-21G754.92
kidney, neonate N10.CNhs11206.758-6D586.70
kidney, neonate N20.CNhs11113.832-19I1134.47
kidney, neonate N25.CNhs11122.1353-25F3150.40
kidney, neonate N30.CNhs11203.1385-42H1141.78
liver, adult pregnant day01.CNhs10466.508-5B23.85
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.79
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.27
liver, embryo E18.CNhs10579.499-43G43.16
liver, neonate N00.CNhs11117.641-24F43.89
liver, neonate N03.CNhs11123.1345-25G239.54
liver, neonate N06.CNhs11101.684-20A824.44
liver, neonate N07.CNhs11103.716-20H249.87
liver, neonate N10.CNhs11115.751-24B932.76
liver, neonate N20.CNhs11220.823-25A311.87
liver, neonate N25.CNhs11198.1368-26H13.77
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B120.14
lung, embryo E12.CNhs10522.354-16G22.46
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C53.56
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I68.57
lung, neonate N00.CNhs11224.640-42C66.05
lung, neonate N06.CNhs11212.683-20E55.52
lung, neonate N07.CNhs11111.715-19A36.64
lung, neonate N10.CNhs11219.750-23E64.15
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C710.19
lung, neonate N30.CNhs11133.1394-42H28.39
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.05
medulla oblongata, neonate N30.CNhs11200.1396-42A30.59
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C23.03
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I78.80
ovary, embryo E18.CNhs11040.505-44H77.66
ovary, neonate N00.CNhs11217.1299-22I415.15
oviduct, adult pregnant day01.CNhs10500.988-6G614.19
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F42.19
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E53.96
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I76.46
pancreas, neonate N00.CNhs11105.645-26G942.38
pancreas, neonate N01.CNhs11138.1531-43D76.54
pancreas, neonate N02.CNhs11139.1539-43D89.63
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E24.22
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G81.70
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C72.59
pituitary gland, embryo E14.CNhs11037.398-44A56.43
pituitary gland, embryo E15.CNhs10592.427-16B97.80
pituitary gland, embryo E16.CNhs11036.449-43F68.38
pituitary gland, embryo E17.CNhs11039.1265-44F58.56
pituitary gland, neonate N00.CNhs11190.1308-22E94.26
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G32.54
prostate, adult.CNhs10470.859-1F83.31
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G42.91
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I50.84
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I1194.13
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C15.57
spleen, embryo E18.CNhs11011.1271-21F22.22
spleen, neonate N10.CNhs11116.752-24D12.45
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H617.18
stomach, embryo E12.CNhs10588.356-43E33.01
stomach, embryo E15.CNhs10603.1252-16G85.08
stomach, embryo E16.CNhs11022.459-17D418.36
stomach, embryo E17.CNhs11006.1035-18D511.29
stomach, embryo E18.CNhs10999.1286-20C619.87
stomach, neonate N03.CNhs11193.1340-24B811.33
stomach, neonate N07.CNhs11210.718-18A915.04
stomach, neonate N25.CNhs11104.1355-25E47.59
stomach, neonate N30.CNhs11134.1386-42I1131.17
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.94
testis, embryo E15.CNhs11034.443-27C52.98
testis, embryo E16.CNhs11033.470-26G54.86
testis, embryo E17.CNhs11029.486-18I55.17
testis, embryo E18.CNhs11027.503-18G53.72
testis, neonate N00.CNhs11189.1300-22B75.63
testis, neonate N07.CNhs11222.726-26I47.03
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.93
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I42.03
thymus, embryo E15.CNhs11005.430-45I22.36
thymus, embryo E16.CNhs11002.456-26C52.60
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G41.19
thymus, neonate N02.CNhs11181.1541-43F81.68
thymus, neonate N03.CNhs11137.2104-43C71.62
thymus, neonate N06.CNhs11197.681-26C41.41
thymus, neonate N07.CNhs11211.713-19D30.99
thymus, neonate N10.CNhs11194.748-24E41.01
thymus, neonate N20.CNhs11186.820-7A21.27
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G21.40
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E45.41
uterus, adult pregnant day19.CNhs10497.590-15F510.70
uterus, adult.CNhs10509.92-27E56.96
vagina, adult.CNhs10502.89-27D53.64
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H22.05
whole body, embryo E14.5.CNhs10578.420-27D24.86
whole body, embryo E14.CNhs10519.395-14B14.40
whole body, embryo E16.CNhs10514.453-14F210.11
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G514.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G511.87
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.09
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.36
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G514.23
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G514.28
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G515.24
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G513.19
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G513.40
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G515.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.09
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G515.50
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.88
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.99
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.37
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G514.12
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G513.47
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.63
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G515.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G513.79
whole body, embryo E17.5.CNhs10513.490-9F911.19
whole body, embryo E17.CNhs10517.475-3I54.00
whole body, embryo E18.CNhs10516.493-3B317.08
whole body, neonate N00.CNhs10525.657-19C213.75
whole body, neonate N01.CNhs10576.659-23C68.42
whole body, neonate N06.CNhs10515.692-21D17.06
whole body, neonate N10.CNhs10518.761-6B41.62





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell7.94e-079
epithelial cell of alimentary canal7.94e-079
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