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FFCP PHASE1:Mm9::chr9:56008858..56008882,-: Difference between revisions

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{{FFCP|EntrezGene=56434|HGNC=|MCL_coexpression_id=1032|UniProt=Q9QY33,Q545L1,Q80XR4|association_with_transcript=0bp_to_ENSMUST00000034876,NM_019793,uc009psx.2,uc009psy.2_5end|description=CAGE_peak_3_at_Tspan3_5end|id=chr9:56008858..56008882,-|ontology_enrichment_celltype=CL:0002321!5.98e-11!70;CL:0000220!5.98e-11!70;CL:0000055!1.15e-10!50;CL:0000221!2.91e-10!44;CL:0000133!2.91e-10!44;CL:0002319!6.19e-10!43;CL:0000393!5.46e-07!39;CL:0000211!5.46e-07!39|ontology_enrichment_celltype_v019_2=CL:0002321,5.85e-11,70;CL:0000221,2.90e-10,44;CL:0000133,2.90e-10,44;CL:0002319,6.18e-10,43;CL:0000393,5.45e-07,39;CL:0000211,5.45e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.08e-13!75;UBERON:0001016!1.08e-13!75;UBERON:0001017!3.90e-13!73;UBERON:0005743!3.90e-13!73;UBERON:0000344!5.72e-10!15;UBERON:0004121!1.65e-09!102;UBERON:0000924!1.65e-09!102;UBERON:0006601!1.65e-09!102;UBERON:0000160!3.19e-09!43;UBERON:0001242!9.61e-09!13;UBERON:0000060!9.61e-09!13;UBERON:0001262!9.61e-09!13;UBERON:0004786!9.61e-09!13;UBERON:0001049!1.42e-08!52;UBERON:0005068!1.42e-08!52;UBERON:0006241!1.42e-08!52;UBERON:0007135!1.42e-08!52;UBERON:0000955!3.47e-08!50;UBERON:0006238!3.47e-08!50;UBERON:0002616!4.37e-08!49;UBERON:0005409!2.63e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.07e-13,75;UBERON:0001017,3.89e-13,73;UBERON:0000160,1.09e-12,31;UBERON:0000344,5.71e-10,15;UBERON:0004121,6.93e-10,95;UBERON:0000924,6.93e-10,95;UBERON:0006601,6.93e-10,95;UBERON:0000073,1.82e-09,54;UBERON:0005409,4.13e-09,47;UBERON:0001242,9.59e-09,13;UBERON:0001262,9.59e-09,13;UBERON:0004786,9.59e-09,13;UBERON:0001049,1.41e-08,52;UBERON:0005068,1.41e-08,52;UBERON:0006241,1.41e-08,52;UBERON:0007135,1.41e-08,52;UBERON:0000955,6.08e-07,47;UBERON:0006238,6.08e-07,47;UBERON:0002616,7.63e-07,46|phase1_expression=16.1750335575842,109.927253406399,128.309785507849,81.6653370528441,106.189894748626,32.7364580228185,27.566291590272,3.22808308603941,0.985521055061667,0.70219357896598,1.88339765048055,2.55270908785077,0.856003649656029,0.961624426608971,1.33243904726265,1.41732687172878,0,1.10411757875383,0.959801035240171,1.69755860719212,9.09963204616447,5.95745707205312,5.48519557191764,50.2376207571297,72.7227420982929,102.787521576589,82.7063032625424,65.5032547365103,85.7005621748246,61.4953516614231,54.9891666425156,1.27006134691926,1.84519436275371,0,23.108129580102,27.0962471934343,17.5585646385637,0.837063261473815,2.3440060335714,0.523523743973798,0,0,0,16.6183799727762,18.8561092068297,14.5001934207728,30.5132624295735,57.9946915971988,53.1640562217422,54.0515119426508,29.2571621197008,54.6259744586892,0.671130424230945,4.35217285206807,1.68046899571232,12.3484529297255,11.747871037489,10.3134418455488,13.3528864167335,14.2827564403449,20.2826049121977,17.6199156675949,23.1216646988896,17.0980946283466,21.7550599764734,21.314403448383,32.6564120465061,49.9483796918021,6.947204024668,8.23536223823313,11.9885227970288,30.2790043468032,21.8659855542097,8.32937434661688,6.3258010872036,10.1114066527102,46.2486700197433,31.0280231547006,37.0191745147547,14.3756053625911,15.5528994124096,7.8137005583514,51.9280378142569,36.5795696520592,34.8380004931127,16.7938293719991,16.0879999302986,9.87917062874093,12.1919171266426,18.5150322261625,7.8263411949453,4.30211938490693,2.03991400112325,2.15881276655127,2.59910566979068,0.896053774194671,12.3591089715942,12.9527045159324,12.9893002301434,11.3068663843309,17.8871143116384,3.84979432242953,2.54805239706646,0,9.52560580449342,10.1343946190039,10.1104889002957,12.3318590096585,3.10725460376606,12.7660239595749,8.32729568477452,3.95805121805784,6.91846491768175,8.89263579260473,5.52666923537813,14.9543243682314,5.43828929015623,27.4738778147832,3.5384422077995,10.5148452465816,7.95029466457417,7.75800405016355,55.9175283654366,19.3235326027621,16.9651832518899,43.4276993854605,4.91242010474273,10.1983464268879,5.08280908292259,29.8083372415597,13.2675174817402,5.90575454930463,13.7321212951898,12.0186264945255,21.1943805450751,21.5780879880118,7.63795228877372,10.5745925018579,37.4029682481839,5.26104639716185,5.46505860443356,7.58676944630461,7.92273371143537,4.82255417074288,6.25935792192216,4.35586648968489,7.77724313845749,7.24369438069244,9.48499168904506,5.48407632486676,5.98233822157426,7.45265490253754,3.89266148915837,8.358051996532,4.7329891373827,7.76233640592123,2.80885274925294,4.37491442095016,3.9782889915383,6.42089894860056,7.50483391939508,7.38254451990161,8.28606574548236,7.47704080640135,6.17068451549513,6.74348439776183,8.04820204198858,6.65562451492866,7.73431294593358,11.1633875573785,9.1607754786817,14.6199987425332,10.9775057645525,9.93127498826751,14.0894265537965,7.82075054082562,108.70777960167,41.5187389661764,6.61193576659225,4.18026009348789,8.89185483122444,13.1094291005173,8.67274370994994,13.1255682017666,43.6566736620951,15.811099653505,22.1174983744237,22.2831248686089,20.8611573217459,38.6492345721315,35.6627782293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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:56434
|HGNC=
|MCL_coexpression_id=1032
|TSSclassifier=NA
|UniProt=uniprot:Q9QY33,uniprot:Q545L1,uniprot:Q80XR4
|association_with_transcript=0bp_to_ENSMUST00000034876,NM_019793,uc009psx.2,uc009psy.2_5end
|cluster_id=chr9:56008858..56008882,-
|description=CAGE_peak_3_at_Tspan3_5end
|id=chr9:56008858..56008882,-
|ontology_enrichment_celltype=CL:0002321!5.98e-11!70;CL:0000220!5.98e-11!70;CL:0000055!1.15e-10!50;CL:0000221!2.91e-10!44;CL:0000133!2.91e-10!44;CL:0002319!6.19e-10!43;CL:0000393!5.46e-07!39;CL:0000211!5.46e-07!39
|ontology_enrichment_celltype_v019_2=CL:0002321,5.85e-11,70;CL:0000221,2.90e-10,44;CL:0000133,2.90e-10,44;CL:0002319,6.18e-10,43;CL:0000393,5.45e-07,39;CL:0000211,5.45e-07,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!1.08e-13!75;UBERON:0001016!1.08e-13!75;UBERON:0001017!3.90e-13!73;UBERON:0005743!3.90e-13!73;UBERON:0000344!5.72e-10!15;UBERON:0004121!1.65e-09!102;UBERON:0000924!1.65e-09!102;UBERON:0006601!1.65e-09!102;UBERON:0000160!3.19e-09!43;UBERON:0001242!9.61e-09!13;UBERON:0000060!9.61e-09!13;UBERON:0001262!9.61e-09!13;UBERON:0004786!9.61e-09!13;UBERON:0001049!1.42e-08!52;UBERON:0005068!1.42e-08!52;UBERON:0006241!1.42e-08!52;UBERON:0007135!1.42e-08!52;UBERON:0000955!3.47e-08!50;UBERON:0006238!3.47e-08!50;UBERON:0002616!4.37e-08!49;UBERON:0005409!2.63e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.07e-13,75;UBERON:0001017,3.89e-13,73;UBERON:0000160,1.09e-12,31;UBERON:0000344,5.71e-10,15;UBERON:0004121,6.93e-10,95;UBERON:0000924,6.93e-10,95;UBERON:0006601,6.93e-10,95;UBERON:0000073,1.82e-09,54;UBERON:0005409,4.13e-09,47;UBERON:0001242,9.59e-09,13;UBERON:0001262,9.59e-09,13;UBERON:0004786,9.59e-09,13;UBERON:0001049,1.41e-08,52;UBERON:0005068,1.41e-08,52;UBERON:0006241,1.41e-08,52;UBERON:0007135,1.41e-08,52;UBERON:0000955,6.08e-07,47;UBERON:0006238,6.08e-07,47;UBERON:0002616,7.63e-07,46
|phase1_expression=16.1750335575842,109.927253406399,128.309785507849,81.6653370528441,106.189894748626,32.7364580228185,27.566291590272,3.22808308603941,0.985521055061667,0.70219357896598,1.88339765048055,2.55270908785077,0.856003649656029,0.961624426608971,1.33243904726265,1.41732687172878,0,1.10411757875383,0.959801035240171,1.69755860719212,9.09963204616447,5.95745707205312,5.48519557191764,50.2376207571297,72.7227420982929,102.787521576589,82.7063032625424,65.5032547365103,85.7005621748246,61.4953516614231,54.9891666425156,1.27006134691926,1.84519436275371,0,23.108129580102,27.0962471934343,17.5585646385637,0.837063261473815,2.3440060335714,0.523523743973798,0,0,0,16.6183799727762,18.8561092068297,14.5001934207728,30.5132624295735,57.9946915971988,53.1640562217422,54.0515119426508,29.2571621197008,54.6259744586892,0.671130424230945,4.35217285206807,1.68046899571232,12.3484529297255,11.747871037489,10.3134418455488,13.3528864167335,14.2827564403449,20.2826049121977,17.6199156675949,23.1216646988896,17.0980946283466,21.7550599764734,21.314403448383,32.6564120465061,49.9483796918021,6.947204024668,8.23536223823313,11.9885227970288,30.2790043468032,21.8659855542097,8.32937434661688,6.3258010872036,10.1114066527102,46.2486700197433,31.0280231547006,37.0191745147547,14.3756053625911,15.5528994124096,7.8137005583514,51.9280378142569,36.5795696520592,34.8380004931127,16.7938293719991,16.0879999302986,9.87917062874093,12.1919171266426,18.5150322261625,7.8263411949453,4.30211938490693,2.03991400112325,2.15881276655127,2.59910566979068,0.896053774194671,12.3591089715942,12.9527045159324,12.9893002301434,11.3068663843309,17.8871143116384,3.84979432242953,2.54805239706646,0,9.52560580449342,10.1343946190039,10.1104889002957,12.3318590096585,3.10725460376606,12.7660239595749,8.32729568477452,3.95805121805784,6.91846491768175,8.89263579260473,5.52666923537813,14.9543243682314,5.43828929015623,27.4738778147832,3.5384422077995,10.5148452465816,7.95029466457417,7.75800405016355,55.9175283654366,19.3235326027621,16.9651832518899,43.4276993854605,4.91242010474273,10.1983464268879,5.08280908292259,29.8083372415597,13.2675174817402,5.90575454930463,13.7321212951898,12.0186264945255,21.1943805450751,21.5780879880118,7.63795228877372,10.5745925018579,37.4029682481839,5.26104639716185,5.46505860443356,7.58676944630461,7.92273371143537,4.82255417074288,6.25935792192216,4.35586648968489,7.77724313845749,7.24369438069244,9.48499168904506,5.48407632486676,5.98233822157426,7.45265490253754,3.89266148915837,8.358051996532,4.7329891373827,7.76233640592123,2.80885274925294,4.37491442095016,3.9782889915383,6.42089894860056,7.50483391939508,7.38254451990161,8.28606574548236,7.47704080640135,6.17068451549513,6.74348439776183,8.04820204198858,6.65562451492866,7.73431294593358,11.1633875573785,9.1607754786817,14.6199987425332,10.9775057645525,9.93127498826751,14.0894265537965,7.82075054082562,108.70777960167,41.5187389661764,6.61193576659225,4.18026009348789,8.89185483122444,13.1094291005173,8.67274370994994,13.1255682017666,43.6566736620951,15.811099653505,22.1174983744237,22.2831248686089,20.8611573217459,38.6492345721315,35.6627782293245,43.2136562961977,7.58671603812327,6.16941968092536,9.01661885384643,6.31319116320474,9.50367187121366,7.5746685481544,17.5165207834193,20.0749801252259,22.4508180813166,27.0239788988743,0.889357881261447,2.8363667971736,2.75182593158484,3.14806957338795,0.811440485554012,1.4470629585145,1.52775511068852,2.5892652370573,4.21551589615092,0.823684239564244,1.43768206527355,2.23284568601102,3.74445207737473,1.26289438973556,2.51156378930677,0.964887042726734,6.28160846566456,8.7166049414423,9.4519686336375,6.95954851678271,7.51008794523207,6.365237782789,5.95109102215034,3.90267295715598,9.14283835815908,6.86540537911202,9.8861956567642,5.89907932976657,9.84304396635605,7.5217510462386,4.52373851817817,8.70249094109935,21.1458637398186,5.79467167239938,34.5183768473753,31.2955203201182,9.67216177722385,15.9056684138755,8.51872192423893,14.055794794679,8.83235930704476,6.93009514062401,10.6943363559549,11.0399847007645,7.69140333182299,7.89090816360542,12.2539211163422,10.6036034419196,10.7874464758284,8.54714897602825,6.18970445543589,8.57844639457184,7.96470830039777,5.82673526771955,10.883648050731,4.71512699389745,6.79194353625777,7.99331384654211,7.23599220871019,9.45187696641514,7.84294232446387,6.95280867458795,6.32511651449993,11.3449097573006,19.7454971337197,6.30213829109586,8.66703181344455,9.00215547132688,6.20690817747958,7.49149033928696,10.86023535974,5.48036908406279,3.75474732901937,21.8187032989735,7.93902232997863,6.26567761177624,4.19807509409354,7.29786391630686,6.44610657616937,6.07321329056727,31.4799303560239,34.1182555699338,3.41741761595705,8.04908785056568,5.37064129372164,2.63715839806567,0.956859594047176,1.83022538565218,6.28920190977265,7.83728133012485,6.49539876880792,16.2294005062569,7.43389584915668,7.72613975082025,9.61247533314031,8.78170843260769,10.6997656235627,12.1377911746339,10.0010681427656,15.4436005770577,74.7878395893645,11.8054469486516,1.12738587736838,7.32631075615496,8.10746603239778,5.44463327363333,8.52454834953025,6.75824501963113,6.21993364822496,8.46328501485676,5.7672639434141,3.8653459332161,3.45636007509439,4.4241556887945,8.5144590421869,6.26536838705446,4.93699127315621,3.04345382634718,3.9736270956253,2.64429988943931,3.2491695978407,3.43285929823702,3.42930629947499,3.2264379243789,2.72882066071307,2.5977197242889,3.74006086981021,11.1097887971454,3.55177525398503,1.43542170575161,2.18250001273302,10.6254276717705,6.75656911624255,6.04400360081975,10.2896821957952,13.5424468089548,10.7302850097243,8.74617949363636,11.4579102687879,10.6548973053086,13.0165678756422,9.82012066606611,8.77529250301348,13.5096360967266,11.3285602246051,18.1216109113137,2.59468368960442,4.78829848081237,6.4878770186571,5.10524105843418,2.09613162627982,3.49302666055027,5.778414922842,8.65347240403356,10.2694147069381,5.55933865880354,8.87177549615839,5.28153755881013,6.74218853783153,7.68301828858431,8.27070752960831,8.57328644309533,7.88013416425017,7.7163688185482,8.24171801606613,6.91834924631667,6.51451579532289,6.03417740941747,8.10683045820891,4.79643174886684,6.68176600948847,6.59993941555077,7.68297486065645,7.3659519202596,5.97538100921792,7.2948495315506,7.47400614182297,7.09232273104057,6.95692773388472,8.52152626522813,6.17301155139652,8.74337022782811,9.82512755470715,8.16510005383534,10.9034349279241,13.0148937280514,15.0714093153274
|short_description=p3@Tspan3
}}

Revision as of 08:29, 5 August 2015

Short description:p3@Tspan3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Tspan3_5end
Coexpression cluster:MCL_coexpression_mm9:1032
Association with transcript: 0bp_to_ENSMUST00000034876, NM_019793, uc009psx.2, uc009psy.2_5end
EntrezGene:56434
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Tspan3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G716.18
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5109.93
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6128.31
CD326+ enterocyte, pool1.CNhs13542.11848-124I381.67
CD326+ enterocyte, pool2.CNhs13197.11849-124I4106.19
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I732.74
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I827.57
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E93.23
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.99
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E61.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.55
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.10
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.96
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A61.70
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H25.96
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I95.49
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D150.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D272.72
GP2+ M cell, pool1.CNhs13228.11845-124H9102.79
GP2+ M cell, pool2.CNhs13231.11846-124I182.71
GP2+ M cell, pool3.CNhs13240.11847-124I265.50
Ileum epithelium, pool1.CNhs13199.10252-104B985.70
Ileum epithelium, pool2.CNhs13232.10253-104C161.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C854.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.27
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F523.11
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F627.10
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F717.56
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D816.62
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D918.86
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B314.50
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B730.51
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C257.99
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B853.16
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C354.05
Mouse Astrocytes, donor2.CNhs12078.11552-120C429.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C454.63
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I94.35
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C112.35
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.75
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C510.31
Mouse Granule cells, donor1.CNhs12131.11713-123C313.35
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C617.62
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C717.10
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E721.76
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D221.31
Mouse Microglia, donor1.CNhs12629.11718-123C832.66
Mouse Microglia, donor2.CNhs12634.11736-123E849.95
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D56.95
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F58.24
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F130.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D521.87
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.33
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.33
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D610.11
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D346.25
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.03
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D737.02
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D414.38
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F415.55
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E451.93
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E536.58
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I634.84
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D616.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F616.09
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.88
Mouse Schwann, donor1.CNhs12507.11728-123D912.19
Mouse Schwann, donor2.CNhs12573.11746-123F918.52
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G37.83
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.16
Mouse hepatocyte, donor6.CNhs13090.11822-124F42.60
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A712.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.95
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.99
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G617.89
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H13.85
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G19.53
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G210.13
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G310.11
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B612.33
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D712.77
adrenal gland, embryo E14.CNhs11038.406-44C58.33
adrenal gland, embryo E16.CNhs11004.1254-43D63.96
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F58.89
adrenal gland, neonate N00.CNhs11191.1311-23C15.53
adrenal gland, neonate N25.CNhs11223.1377-27I314.95
amnion, adult pregnant day17.5.CNhs10488.583-22A85.44
aorta, adult.CNhs10498.46-23H127.47
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F510.51
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C37.76
cecum, adult.CNhs10467.37-13H455.92
cerebellum, adult.CNhs10494.15-8B219.32
cerebellum, neonate N30.CNhs11135.1395-42I216.97
colon, adult.CNhs10468.36-18H743.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.91
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D110.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.08
corpora quadrigemina, adult.CNhs10501.16-22A429.81
corpus striatum, adult.CNhs10487.19-21D813.27
corpus striatum, neonate N00.CNhs11226.630-43F15.91
cortex, adult.CNhs10473.12-14D513.73
cortex, neonate N30.CNhs11107.1392-42F212.02
diencephalon, adult.CNhs10482.20-12F221.19
diencephalon, neonate N30.CNhs11201.1388-42B221.58
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B17.64
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.57
epididymis, adult.CNhs10490.58-23B237.40
eyeball, adult.CNhs10484.31-12G45.26
eyeball, embryo E12.CNhs11016.345-16C65.47
eyeball, embryo E14.CNhs10521.399-16E27.59
eyeball, embryo E15.CNhs10593.426-16C97.92
eyeball, embryo E17.CNhs11023.1261-18D44.82
eyeball, neonate N00.CNhs11207.633-15C66.26
eyeball, neonate N01.CNhs11140.1532-43E74.36
eyeball, neonate N02.CNhs11205.1551-44G87.78
eyeball, neonate N16.CNhs11188.777-19A27.24
forelimb, embryo E11.CNhs10596.335-25E29.48
forelimb, embryo E12.CNhs10600.359-14H25.48
forelimb, embryo E13.CNhs10589.384-1E25.98
forelimb, embryo E14.CNhs10577.413-26A87.45
forelimb, embryo E15.CNhs11007.437-20E73.89
forelimb, embryo E17.CNhs10598.1517-43C48.36
forelimb, embryo E18.CNhs11008.1520-43B54.73
gonad, embryo E13.CNhs11044.1564-45I67.76
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D24.37
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D53.98
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F57.50
heart, embryo E13.CNhs11013.376-3I97.38
heart, embryo E14.CNhs10597.403-26D48.29
heart, embryo E15.CNhs11017.431-16C87.48
heart, embryo E16.CNhs11021.457-17C66.17
heart, embryo E17.CNhs11025.479-18E56.74
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E36.66
heart, neonate N03.CNhs11221.1349-25I27.73
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G19.16
heart, neonate N20.CNhs11127.821-26I614.62
heart, neonate N25.CNhs11196.1351-25D310.98
heart, neonate N30.CNhs11202.1390-42D29.93
hippocampus, adult.CNhs10478.13-16E814.09
hippocampus, neonate N00.CNhs11228.627-43G17.82
intestinal mucosa, adult.CNhs10506.860-29I3108.71
intestine, adult.CNhs10496.178-9A341.52
intestine, embryo E12.CNhs11019.1251-16I56.61
intestine, embryo E13.CNhs11010.381-16D54.18
intestine, embryo E15.CNhs10602.976-16D88.89
intestine, embryo E16.CNhs10585.463-22H413.11
intestine, embryo E17.CNhs10582.482-18D38.67
intestine, embryo E18.CNhs10526.1289-20F713.13
intestine, neonate N00.CNhs11126.644-26D143.66
intestine, neonate N01.CNhs11192.1322-23E915.81
intestine, neonate N06.CNhs11102.688-20B822.12
intestine, neonate N07.CNhs11095.720-20F222.28
intestine, neonate N10.CNhs11098.755-23A520.86
intestine, neonate N20.CNhs11187.827-18D138.65
intestine, neonate N25.CNhs11121.1352-25E335.66
intestine, neonate N30.CNhs11131.1384-42G143.21
kidney, embryo E14.CNhs10606.411-4I97.59
kidney, embryo E15.CNhs10997.434-16F86.17
kidney, embryo E16.CNhs10584.464-22A59.02
kidney, embryo E17.CNhs11028.483-18I26.31
kidney, embryo E18.CNhs11001.1288-20C79.50
kidney, neonate N00.CNhs11214.646-21G77.57
kidney, neonate N10.CNhs11206.758-6D517.52
kidney, neonate N20.CNhs11113.832-19I120.07
kidney, neonate N25.CNhs11122.1353-25F322.45
kidney, neonate N30.CNhs11203.1385-42H127.02
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F82.84
liver, embryo E13.CNhs10524.378-3H62.75
liver, embryo E14.CNhs10594.409-16E13.15
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F51.45
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G42.59
liver, neonate N00.CNhs11117.641-24F44.22
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H22.23
liver, neonate N10.CNhs11115.751-24B93.74
liver, neonate N20.CNhs11220.823-25A31.26
liver, neonate N25.CNhs11198.1368-26H12.51
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B16.28
lung, embryo E12.CNhs10522.354-16G28.72
lung, embryo E14.CNhs10604.404-26F89.45
lung, embryo E15.CNhs11020.432-17C56.96
lung, embryo E16.CNhs10998.458-17B67.51
lung, embryo E17.CNhs10605.480-44A66.37
lung, embryo E18.CNhs10583.1287-20I65.95
lung, neonate N00.CNhs11224.640-42C63.90
lung, neonate N06.CNhs11212.683-20E59.14
lung, neonate N07.CNhs11111.715-19A36.87
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A45.90
lung, neonate N25.CNhs11119.1359-25C79.84
lung, neonate N30.CNhs11133.1394-42H27.52
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A14.52
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A18.70
mammary gland, adult lactating day02.CNhs10480.595-22B621.15
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C234.52
medulla oblongata, neonate N30.CNhs11200.1396-42A331.30
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C79.67
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C215.91
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E18.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.06
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E38.83
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D76.93
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D810.69
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D47.69
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D57.89
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D612.25
olfactory brain, adult.CNhs10489.18-22I910.60
ovary, adult.CNhs10507.91-2I710.79
ovary, embryo E18.CNhs11040.505-44H78.55
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G68.58
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F45.83
pancreas, embryo E15.CNhs11042.1556-45F210.88
pancreas, embryo E16.CNhs11003.460-26E54.72
pancreas, embryo E17.CNhs10599.1558-45G36.79
pancreas, embryo E18.CNhs10580.1535-43I77.99
pancreas, neonate N00.CNhs11105.645-26G97.24
pancreas, neonate N01.CNhs11138.1531-43D79.45
pancreas, neonate N02.CNhs11139.1539-43D87.84
pancreas, neonate N16.CNhs11136.787-43B66.95
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H511.34
pituitary gland, adult.CNhs10493.21-1G819.75
pituitary gland, embryo E12.CNhs11018.346-16E66.30
pituitary gland, embryo E13.CNhs11009.370-44C78.67
pituitary gland, embryo E14.CNhs11037.398-44A59.00
pituitary gland, embryo E15.CNhs10592.427-16B96.21
pituitary gland, embryo E16.CNhs11036.449-43F67.49
pituitary gland, embryo E17.CNhs11039.1265-44F510.86
pituitary gland, neonate N00.CNhs11190.1308-22E95.48
placenta, adult pregnant day10.CNhs10472.539-13I73.75
placenta, adult pregnant day17.CNhs10464.577-18G321.82
prostate, adult.CNhs10470.859-1F87.94
skin, adult.CNhs10492.30-1C36.27
skin, neonate N00.CNhs11124.650-25G44.20
skin, neonate N03.CNhs11215.662-22H37.30
skin, neonate N06.CNhs11097.693-20I56.45
skin, neonate N10.CNhs11108.762-6C46.07
small intestine, neonate N16.CNhs11114.790-21I131.48
spinal cord, adult.CNhs10505.24-13C934.12
spleen, adult.CNhs10465.25-2G23.42
spleen, embryo E16.CNhs11035.461-43C18.05
spleen, embryo E18.CNhs11011.1271-21F25.37
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H10.96
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C97.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.50
stomach, adult.CNhs10503.33-1H616.23
stomach, embryo E12.CNhs10588.356-43E37.43
stomach, embryo E15.CNhs10603.1252-16G87.73
stomach, embryo E16.CNhs11022.459-17D49.61
stomach, embryo E17.CNhs11006.1035-18D58.78
stomach, embryo E18.CNhs10999.1286-20C610.70
stomach, neonate N03.CNhs11193.1340-24B812.14
stomach, neonate N07.CNhs11210.718-18A910.00
stomach, neonate N25.CNhs11104.1355-25E415.44
stomach, neonate N30.CNhs11134.1386-42I174.79
submandibular gland, adult.CNhs10469.59-29C111.81
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F57.33
testis, embryo E15.CNhs11034.443-27C58.11
testis, embryo E16.CNhs11033.470-26G55.44
testis, embryo E17.CNhs11029.486-18I58.52
testis, embryo E18.CNhs11027.503-18G56.76
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I48.46
testis, neonate N10.CNhs11204.763-44D95.77
testis, neonate N20.CNhs11110.839-18H33.87
testis, neonate N30.CNhs11130.1391-42E23.46
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I48.51
thymus, embryo E15.CNhs11005.430-45I26.27
thymus, embryo E16.CNhs11002.456-26C54.94
thymus, embryo E17.CNhs10581.478-18C13.04
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F82.64
thymus, neonate N03.CNhs11137.2104-43C73.25
thymus, neonate N06.CNhs11197.681-26C43.43
thymus, neonate N07.CNhs11211.713-19D33.43
thymus, neonate N10.CNhs11194.748-24E43.23
thymus, neonate N20.CNhs11186.820-7A22.73
thymus, neonate N25.CNhs11125.1362-25G72.60
thymus, neonate N30.CNhs11132.1393-42G23.74
tongue, adult.CNhs10499.32-1B411.11
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.44
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E410.63
uterus, adult pregnant day19.CNhs10497.590-15F56.76
uterus, adult.CNhs10509.92-27E56.04
vagina, adult.CNhs10502.89-27D510.29
vesicular gland, adult.CNhs10491.51-27F813.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A110.73
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A28.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A311.46
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.65
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A413.02
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A68.78
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A713.51
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A811.33
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A918.12
whole body, embryo E11.CNhs11014.324-5I82.59
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H26.49
whole body, embryo E14.5.CNhs10578.420-27D25.11
whole body, embryo E14.CNhs10519.395-14B12.10
whole body, embryo E16.CNhs10514.453-14F23.49
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.27
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.56
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G58.87
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.27
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G57.88
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.72
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G56.92
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.51
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G58.11
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G56.60
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G57.37
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.98
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G57.29
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G57.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.09
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.96
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G58.52
whole body, embryo E17.5.CNhs10513.490-9F96.17
whole body, embryo E17.CNhs10517.475-3I58.74
whole body, embryo E18.CNhs10516.493-3B39.83
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C610.90
whole body, neonate N06.CNhs10515.692-21D113.01
whole body, neonate N10.CNhs10518.761-6B415.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
embryonic cell5.85e-1170
ectodermal cell2.90e-1044
neurectodermal cell2.90e-1044
neural cell6.18e-1043
electrically responsive cell5.45e-0739
electrically active cell5.45e-0739

Uber anatomy
Ontology termp-valuen
nervous system1.07e-1375
central nervous system3.89e-1373
intestine1.09e-1231
mucosa5.71e-1015
ectoderm-derived structure6.93e-1095
ectoderm6.93e-1095
presumptive ectoderm6.93e-1095
regional part of nervous system1.82e-0954
gastrointestinal system4.13e-0947
intestinal mucosa9.59e-0913
wall of intestine9.59e-0913
gastrointestinal system mucosa9.59e-0913
neural tube1.41e-0852
neural rod1.41e-0852
future spinal cord1.41e-0852
neural keel1.41e-0852
brain6.08e-0747
future brain6.08e-0747
regional part of brain7.63e-0746
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