FFCP PHASE1:Mm9::chr9:55938149..55938165,+: Difference between revisions
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{{FFCP|EntrezGene=19200|HGNC=|UniProt=P97814|association_with_transcript=366bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end|description=CAGE_peak_8_at_Pstpip1_5end|id=chr9:55938149..55938165,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000557,4.36e-15,7;CL:0000049,1.59e-13,19;CL:0002476,6.74e-10,2;CL:0000988,1.34e-07,32;CL:0002032,1.34e-07,32;CL:0000037,1.34e-07,32;CL:0000837,1.34e-07,32|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0001987,6.74e-10,2;UBERON:0003124,6.74e-10,2;UBERON:0004340,6.74e-10,2;UBERON:0001896,3.92e-09,2;UBERON:0002298,3.92e-09,2;UBERON:0005290,3.92e-09,2;UBERON:0010096,3.92e-09,2;UBERON:0002204,2.66e-07,32;UBERON:0005631,7.27e-07,3;UBERON:0000478,7.27e-07,3;UBERON:0000158,7.27e-07,3|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0.485510353031154,0.251793635951155,0.405507724878058,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,1.10115880999389,0.510749352340751,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0,0.376999773989026,0.988779870937496,0,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0,0.255457055208591,3.35482348616577,2.39961092397363,2.79554499560742,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,1.70498099637356,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,3.01582567878545,3.26343410291226,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,4.87213762986786,0.220528398054962,0.32977250588296,0.161464426695906,0.361877549568935,0,0.328281799490123,0,1.48340241608408,0.341741761595705,0,0.185194527369712,0,0,0,5.26933132980952,5.59805809294632,4.28419918793714,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0.927471342481686|short_description=p8@Pstpip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19200 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P97814 | |||
|association_with_transcript=366bp_to_ENSMUST00000138646,ENSMUST00000147360,NM_011193,uc009psv.2_5end | |||
|cluster_id=chr9:55938149..55938165,+ | |||
|description=CAGE_peak_8_at_Pstpip1_5end | |||
|id=chr9:55938149..55938165,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000557,4.36e-15,7;CL:0000049,1.59e-13,19;CL:0002476,6.74e-10,2;CL:0000988,1.34e-07,32;CL:0002032,1.34e-07,32;CL:0000037,1.34e-07,32;CL:0000837,1.34e-07,32 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001987,6.74e-10,2;UBERON:0003124,6.74e-10,2;UBERON:0004340,6.74e-10,2;UBERON:0001896,3.92e-09,2;UBERON:0002298,3.92e-09,2;UBERON:0005290,3.92e-09,2;UBERON:0010096,3.92e-09,2;UBERON:0002204,2.66e-07,32;UBERON:0005631,7.27e-07,3;UBERON:0000478,7.27e-07,3;UBERON:0000158,7.27e-07,3 | |||
|phase1_expression=0,0,0,0,0,0.16787927191189,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0,0,0,0,0.274228867211478,0,0.0850432901510698,0,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,0,0.485510353031154,0.251793635951155,0.405507724878058,0.183546752161682,0,0.65407546914134,0.219686182734472,0.388859798148567,0.699932108126813,0,0,0,0,1.02903774414379,0.286533439938757,1.03134418455488,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.898800331555214,0,0,0,0,0,0,0,0,0,1.10115880999389,0.510749352340751,0.614426133024974,0,0,0,0.279182999001381,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0.506719730950197,0.505524445014783,0.11418387971906,0,0.148442139064825,0,0.304465478312141,0,0,0,0.376999773989026,0.988779870937496,0,0,0.323533699894818,0.220841518460394,1.45462575940567,0,0,0,0.255457055208591,3.35482348616577,2.39961092397363,2.79554499560742,0.149790639404823,0.457500602818626,0,0.173824320192276,0.255715457330331,0.20778804455956,0,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0,0,0,1.40442637462647,1.02939162845886,1.70498099637356,0,0,0,0,0,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0,0.167506257441816,0,0,0.157635144106191,0,0,0.163863314715738,0.172684981865896,0.144649058581512,3.01582567878545,3.26343410291226,0,0,1.28440471990234,1.28932855251423,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3467170806371,4.87213762986786,0.220528398054962,0.32977250588296,0.161464426695906,0.361877549568935,0,0.328281799490123,0,1.48340241608408,0.341741761595705,0,0.185194527369712,0,0,0,5.26933132980952,5.59805809294632,4.28419918793714,0,0,0,0,0,0,0,0.0826534557253359,0,0.259229946583586,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0,0,0,0,0,0.308132871494482,0.25984164595559,0.179026695667481,0,0.120195449519969,0,0.100966449948148,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0.167884616364078,0,0.375364950902364,0.36630324853453,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.399024873401031,0,0,0.209613162627982,0,0,0,0.320919209591815,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0,0,0,0,0.412085900803307,0,0.342869252385415,0,0,0,0.0941093804153306,0,0.365855945745545,0,0,0,0,0,0,0,0.385813221962283,0,0.233931608445408,0,0,0,0.927471342481686 | |||
|short_description=p8@Pstpip1 | |||
}} |
Revision as of 08:25, 5 August 2015
Short description: | p8@Pstpip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Pstpip1_5end |
Coexpression cluster: | NA |
Association with transcript: | 366bp_to_ENSMUST00000138646, ENSMUST00000147360, NM_011193, uc009psv.2_5end |
EntrezGene: | 19200 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte monocyte progenitor cell | 4.36e-15 | 7 |
common myeloid progenitor | 1.59e-13 | 19 |
bone marrow macrophage | 6.74e-10 | 2 |
hematopoietic cell | 1.34e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.34e-07 | 32 |
hematopoietic stem cell | 1.34e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.34e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
placenta | 6.74e-10 | 2 |
chorion | 6.74e-10 | 2 |
allantois | 6.74e-10 | 2 |
medulla oblongata | 3.92e-09 | 2 |
brainstem | 3.92e-09 | 2 |
myelencephalon | 3.92e-09 | 2 |
future myelencephalon | 3.92e-09 | 2 |
musculoskeletal system | 2.66e-07 | 32 |
extraembryonic membrane | 7.27e-07 | 3 |
extraembryonic structure | 7.27e-07 | 3 |
membranous layer | 7.27e-07 | 3 |