FFCP PHASE1:Mm9::chr9:21172491..21172505,+: Difference between revisions
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{{FFCP|EntrezGene=16201|HGNC=|MCL_coexpression_id=7|UniProt=Q45VK5|association_with_transcript=28bp_to_ENSMUST00000115414_5end|description=CAGE_peak_4_at_Ilf3_5end|id=chr9:21172491..21172505,+|ontology_enrichment_celltype=CL:0000542!8.01e-10!13;CL:0000051!8.01e-10!13;CL:0000838!2.82e-09!12;CL:0000084!1.42e-08!11;CL:0000827!1.42e-08!11;CL:0000791!1.75e-07!9;CL:0000789!1.75e-07!9;CL:0002420!1.75e-07!9;CL:0002419!1.75e-07!9;CL:0000790!1.75e-07!9;CL:0000738!2.65e-07!17;CL:0002087!2.65e-07!17;CL:0000988!4.89e-07!32;CL:0002032!4.89e-07!32;CL:0000037!4.89e-07!32;CL:0000566!4.89e-07!32;CL:0000837!4.89e-07!32;CL:0000624!8.48e-07!8|ontology_enrichment_celltype_v019_2=CL:0000542,6.12e-23,13;CL:0000051,6.12e-23,13;CL:0000838,1.60e-21,12;CL:0000084,1.05e-19,11;CL:0000827,1.05e-19,11;CL:0000738,2.35e-19,17;CL:0002087,2.35e-19,17;CL:0000791,6.89e-17,9;CL:0000789,6.89e-17,9;CL:0002420,6.89e-17,9;CL:0002419,6.89e-17,9;CL:0000790,6.89e-17,9;CL:0000624,4.00e-15,8;CL:0000988,1.73e-14,32;CL:0002032,1.73e-14,32;CL:0000037,1.73e-14,32;CL:0000837,1.73e-14,32;CL:0000893,1.01e-11,6;CL:0002489,1.01e-11,6;CL:0000898,1.01e-11,6;CL:0000809,1.01e-11,6;CL:0000810,1.01e-11,6;CL:0000895,1.01e-11,6;CL:0000808,1.01e-11,6;CL:0000894,1.01e-11,6;CL:0000806,1.01e-11,6;CL:0000807,1.01e-11,6;CL:0000805,1.01e-11,6;CL:0002425,1.01e-11,6;CL:0002436,1.01e-11,6;CL:0002427,1.01e-11,6;CL:0002428,1.01e-11,6;CL:0002429,1.01e-11,6;CL:0002433,1.01e-11,6;CL:0002431,1.01e-11,6;CL:0002432,1.01e-11,6;CL:0002031,3.48e-10,25;CL:0000034,1.15e-08,97;CL:0002320,1.41e-08,46;CL:0000134,1.41e-08,46;CL:0000723,4.45e-07,91;CL:0000048,4.45e-07,91|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.03e-08!23;UBERON:0000974!4.03e-08!23;UBERON:0004807!4.03e-08!23;UBERON:0005058!4.03e-08!23;UBERON:0003351!4.03e-08!23;UBERON:0009113!4.03e-08!23;UBERON:0003295!4.03e-08!23;UBERON:0009722!4.03e-08!23;UBERON:0005562!4.03e-08!23;UBERON:0007690!4.03e-08!23;UBERON:0006562!1.14e-07!24;UBERON:0001557!1.14e-07!24;UBERON:0001042!1.14e-07!24;UBERON:0008814!1.14e-07!24;UBERON:0009145!1.14e-07!24;UBERON:0003408!3.02e-07!24;UBERON:0000153!5.28e-07!94;UBERON:0004177!8.68e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-08,23;UBERON:0000974,1.23e-08,23;UBERON:0004807,1.23e-08,23;UBERON:0005058,1.23e-08,23;UBERON:0003351,1.23e-08,23;UBERON:0009113,1.23e-08,23;UBERON:0003295,1.23e-08,23;UBERON:0009722,1.23e-08,23;UBERON:0005562,1.23e-08,23;UBERON:0007690,1.23e-08,23;UBERON:0002384,1.41e-08,46;UBERON:0006562,3.72e-08,24;UBERON:0003408,3.72e-08,24;UBERON:0001557,3.72e-08,24;UBERON:0001042,3.72e-08,24;UBERON:0008814,3.72e-08,24;UBERON:0009145,3.72e-08,24;UBERON:0000072,6.20e-07,27|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,2.1950964985068,63.2141362460984,59.6864542121083,7.19115466547121,5.66382328866889,1.54080656938085,2.18551006047494,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.685572168028694,0.42438965179803,1.19060606211498,1.29078236561151,1.56719873483361,0,0,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0.635030673459631,0,0,0,0.332469290716985,0.612508068787107,0,0,0.523523743973798,0,0,0,0.629484089877886,0.912392380975631,0.367093504323363,0,0.872100625521786,0.219686182734472,0,0.419959264876088,0,16.7782606057736,14.5072428402269,8.4023449785616,0.514518872071894,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,1.65903379693564,1.4850653216486,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,1.0543001812006,0,0,0.383062014255563,0.768032666281217,0.263772575460388,1.37231465403614,1.04182674111352,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.996601765593721,0.745597783301202,0.227178579999552,0.226714680320357,0.869593466105033,0,0.679971333707751,0,0,0,0.280888840263504,0.681721290312231,0.779358013808606,0.35333957451034,0.563373679106722,0,2.54805239706646,0,0.216491041011214,0,0,0.22836775943812,0.776813650941515,0.29688427812965,0.346970653532272,0.913396434936424,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,1.91704199209472,0.599902730993408,1.52484272487678,0.599162557619291,0.915001205637253,1.25654352112864,0.347648640384553,1.02286182932132,0,0.324482526135515,0.203678727700633,0.746441823660558,0,0.210441855886474,0.650602214813519,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.640568601424249,0.281105173679186,0,0.215567992932842,0.756424320671277,0.527853372491847,1.09597866213787,0.278047249225598,1.0447564995665,0,0.995171334092466,0,1.02939162845886,1.42081749697796,0.828503090142008,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16201 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q45VK5 | |||
|association_with_transcript=28bp_to_ENSMUST00000115414_5end | |||
|cluster_id=chr9:21172491..21172505,+ | |||
|description=CAGE_peak_4_at_Ilf3_5end | |||
|id=chr9:21172491..21172505,+ | |||
|ontology_enrichment_celltype=CL:0000542!8.01e-10!13;CL:0000051!8.01e-10!13;CL:0000838!2.82e-09!12;CL:0000084!1.42e-08!11;CL:0000827!1.42e-08!11;CL:0000791!1.75e-07!9;CL:0000789!1.75e-07!9;CL:0002420!1.75e-07!9;CL:0002419!1.75e-07!9;CL:0000790!1.75e-07!9;CL:0000738!2.65e-07!17;CL:0002087!2.65e-07!17;CL:0000988!4.89e-07!32;CL:0002032!4.89e-07!32;CL:0000037!4.89e-07!32;CL:0000566!4.89e-07!32;CL:0000837!4.89e-07!32;CL:0000624!8.48e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,6.12e-23,13;CL:0000051,6.12e-23,13;CL:0000838,1.60e-21,12;CL:0000084,1.05e-19,11;CL:0000827,1.05e-19,11;CL:0000738,2.35e-19,17;CL:0002087,2.35e-19,17;CL:0000791,6.89e-17,9;CL:0000789,6.89e-17,9;CL:0002420,6.89e-17,9;CL:0002419,6.89e-17,9;CL:0000790,6.89e-17,9;CL:0000624,4.00e-15,8;CL:0000988,1.73e-14,32;CL:0002032,1.73e-14,32;CL:0000037,1.73e-14,32;CL:0000837,1.73e-14,32;CL:0000893,1.01e-11,6;CL:0002489,1.01e-11,6;CL:0000898,1.01e-11,6;CL:0000809,1.01e-11,6;CL:0000810,1.01e-11,6;CL:0000895,1.01e-11,6;CL:0000808,1.01e-11,6;CL:0000894,1.01e-11,6;CL:0000806,1.01e-11,6;CL:0000807,1.01e-11,6;CL:0000805,1.01e-11,6;CL:0002425,1.01e-11,6;CL:0002436,1.01e-11,6;CL:0002427,1.01e-11,6;CL:0002428,1.01e-11,6;CL:0002429,1.01e-11,6;CL:0002433,1.01e-11,6;CL:0002431,1.01e-11,6;CL:0002432,1.01e-11,6;CL:0002031,3.48e-10,25;CL:0000034,1.15e-08,97;CL:0002320,1.41e-08,46;CL:0000134,1.41e-08,46;CL:0000723,4.45e-07,91;CL:0000048,4.45e-07,91 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.03e-08!23;UBERON:0000974!4.03e-08!23;UBERON:0004807!4.03e-08!23;UBERON:0005058!4.03e-08!23;UBERON:0003351!4.03e-08!23;UBERON:0009113!4.03e-08!23;UBERON:0003295!4.03e-08!23;UBERON:0009722!4.03e-08!23;UBERON:0005562!4.03e-08!23;UBERON:0007690!4.03e-08!23;UBERON:0006562!1.14e-07!24;UBERON:0001557!1.14e-07!24;UBERON:0001042!1.14e-07!24;UBERON:0008814!1.14e-07!24;UBERON:0009145!1.14e-07!24;UBERON:0003408!3.02e-07!24;UBERON:0000153!5.28e-07!94;UBERON:0004177!8.68e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.23e-08,23;UBERON:0000974,1.23e-08,23;UBERON:0004807,1.23e-08,23;UBERON:0005058,1.23e-08,23;UBERON:0003351,1.23e-08,23;UBERON:0009113,1.23e-08,23;UBERON:0003295,1.23e-08,23;UBERON:0009722,1.23e-08,23;UBERON:0005562,1.23e-08,23;UBERON:0007690,1.23e-08,23;UBERON:0002384,1.41e-08,46;UBERON:0006562,3.72e-08,24;UBERON:0003408,3.72e-08,24;UBERON:0001557,3.72e-08,24;UBERON:0001042,3.72e-08,24;UBERON:0008814,3.72e-08,24;UBERON:0009145,3.72e-08,24;UBERON:0000072,6.20e-07,27 | |||
|phase1_expression=0.320297694209588,0,0,0,0.500895729946347,0,0,2.1950964985068,63.2141362460984,59.6864542121083,7.19115466547121,5.66382328866889,1.54080656938085,2.18551006047494,0.333109761815663,0.404950534779652,0.699561878128147,0.630924330716475,0.685572168028694,0.42438965179803,1.19060606211498,1.29078236561151,1.56719873483361,0,0,0,0.430761996159075,0.215471232685889,0,0,0.443461021310609,0.635030673459631,0,0,0,0.332469290716985,0.612508068787107,0,0,0.523523743973798,0,0,0,0.629484089877886,0.912392380975631,0.367093504323363,0,0.872100625521786,0.219686182734472,0,0.419959264876088,0,16.7782606057736,14.5072428402269,8.4023449785616,0.514518872071894,0,0,1.01158230429799,1.05798195854407,0.633831403506179,0,0.889294796111139,0,0,0,0.299600110518405,0,1.65903379693564,1.4850653216486,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,1.0543001812006,0,0,0.383062014255563,0.768032666281217,0.263772575460388,1.37231465403614,1.04182674111352,0.558365998002762,1.12552522006336,0.30559649555362,0.294628585473668,0.996601765593721,0.745597783301202,0.227178579999552,0.226714680320357,0.869593466105033,0,0.679971333707751,0,0,0,0.280888840263504,0.681721290312231,0.779358013808606,0.35333957451034,0.563373679106722,0,2.54805239706646,0,0.216491041011214,0,0,0.22836775943812,0.776813650941515,0.29688427812965,0.346970653532272,0.913396434936424,0.230615497256059,0,0.23517741427141,0.251333182659351,0,0,0,0.323533699894818,0.220841518460394,0,0,0,0.209446706813455,0.255457055208591,1.91704199209472,0.599902730993408,1.52484272487678,0.599162557619291,0.915001205637253,1.25654352112864,0.347648640384553,1.02286182932132,0,0.324482526135515,0.203678727700633,0.746441823660558,0,0.210441855886474,0.650602214813519,0.229902104433473,0.180062129805349,0.30140963567143,0.476255494059295,0.640568601424249,0.281105173679186,0,0.215567992932842,0.756424320671277,0.527853372491847,1.09597866213787,0.278047249225598,1.0447564995665,0,0.995171334092466,0,1.02939162845886,1.42081749697796,0.828503090142008,0.469052119962192,0.180062061461015,0.23674473558521,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,0.720332286654991,0,0.528901133327089,1.49301775374664,0.928946687441754,0.902072229254653,0.605050573870028,0.444756087689741,0,0,0.329397909448022,0.251335208800269,0,0.38992817423824,0,0.216138049874694,0,1.13800740571849,1.02823661348756,0,0.814605311381257,0.193952487167626,0.701358198903186,0.126473074248515,0.147610147979602,0,0.123397163921801,0,0.83422552858047,0.589676985339609,0.449724224769707,0.608580364165509,0,0.25462585178142,0,0.486405680325106,0,1.43768206527355,0.372140947668503,0.312037673114561,0.505157755894224,0,0.482443521363367,0.554259570499814,1.51593129416388,1.14075483509418,0.509235257325564,0.704070744865506,0,0.238043640886014,0.195133647857799,0.315270288212382,0.221464689648775,0.478364305972461,0.163863314715738,0.518054945597687,0.289298117163023,1.50791283939272,0,0,0,0.321101179975584,0.35163505977661,0.163934945376675,0.252470927204373,0.315508219416257,0,0.215423397732799,0.238968797952552,0.668396022247182,0,0,0.292255857911312,1.18586333383957,0.642642632843614,0.709700426041343,0.534196811001766,0.651547837414304,0.494910368917606,0,0.242780636154981,1.209294227859,0.188605079755898,0,0.307435147943927,0,0.727067458955011,0.356497378384721,0,0,0,0.340439605753788,0.720244376125241,1.55230420539305,0.857348140126369,0.354680467284547,0.535106452806212,0.493647061806363,0.304464949114599,0,0.21183207086382,0,0.16488625294148,0.322928853391811,0.180938774784468,0.358117032009409,0,0,0.18542530201051,0.170870880797853,0.82554747185289,0.555583582109135,0,0.546776910884101,0.228778173206523,2.54967644990783,1.53946597556024,1.93479963326193,0,0.790839983952838,0,0.324016022465404,0.627264888043406,0,0.134864346384821,0.165306911450672,0.26175594198403,0.129614973291793,0,6.76431526421028,0.747582730219894,0.66183396182839,1.55560950675238,0.516639293910924,0.168956125490778,0.704143431874524,1.17183946359555,0.943734099831398,1.20792060413003,2.30424005006292,1.26404448251271,0.810900861160657,1.1298205288131,0.389762468933385,0.716106782669926,0.79472541912506,1.9231271923195,1.03382669022204,0.908698049533329,0.838274873204998,0.806609481094724,1.07203668813728,0.962118416403295,0.818138315270983,0.226730383615211,0,0.62799699626633,0.671538465456314,0.19318959403219,0.375364950902364,0.183151624267265,0.214368379079066,0,0.564751842617067,0,0,0.859265911718438,0.685082519770642,0,1.35004500046361,1.35096360967266,0.453142408984205,1.03552062350364,0.518936737920883,0,0.682934423016537,0,0.419226325255965,0.367687016900028,0.222246727801615,0,0.320919209591815,0.505394423527595,0.760437899670719,0.565879024158229,0.561849044819294,0.192075457214608,0.287177344778066,0.476293691283074,0.231768651889711,0,0,0.29439784026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| |||
|short_description=p4@Ilf3 | |||
}} |
Revision as of 21:43, 4 August 2015
Short description: | p4@Ilf3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ilf3_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 28bp_to_ENSMUST00000115414_5end |
EntrezGene: | 16201 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.23e-08 | 23 |
neck | 1.23e-08 | 23 |
respiratory system epithelium | 1.23e-08 | 23 |
hemolymphoid system gland | 1.23e-08 | 23 |
pharyngeal epithelium | 1.23e-08 | 23 |
thymic region | 1.23e-08 | 23 |
pharyngeal gland | 1.23e-08 | 23 |
entire pharyngeal arch endoderm | 1.23e-08 | 23 |
thymus primordium | 1.23e-08 | 23 |
early pharyngeal endoderm | 1.23e-08 | 23 |
connective tissue | 1.41e-08 | 46 |
pharynx | 3.72e-08 | 24 |
gland of gut | 3.72e-08 | 24 |
upper respiratory tract | 3.72e-08 | 24 |
chordate pharynx | 3.72e-08 | 24 |
pharyngeal arch system | 3.72e-08 | 24 |
pharyngeal region of foregut | 3.72e-08 | 24 |
segment of respiratory tract | 6.20e-07 | 27 |