FFCP PHASE1:Hg19::chrX:152773830..152773842,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=633 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1044 | |||
|TSSclassifier=strong | |||
|UniProt=P21810 | |||
|association_with_transcript=-33bp_to_U11686_5end | |||
|coexpression_cluster_id=C288 | |||
|description=CAGE_peak_25_at_BGN_5end | |||
|id=chrX:152773830..152773842,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-16!180;CL:0000057!1.95e-11!75;CL:0000183!1.96e-10!59;CL:0000359!1.08e-09!32;CL:0000187!1.36e-09!54;CL:0000680!1.53e-08!57;CL:0000056!1.53e-08!57;CL:0000355!1.53e-08!57;CL:0000393!1.29e-07!60;CL:0000211!1.29e-07!60;CL:0000192!2.33e-07!42;CL:0000514!2.33e-07!42;CL:0000222!7.14e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000327;6.29e-10;15!CL:0002620;2.28e-08;23!CL:0002580;8.50e-08;3!CL:0000138;1.61e-07;6!CL:0000499;1.90e-07;28!CL:0000197;3.52e-07;6!CL:0000098;3.52e-07;6!CL:0002167;3.52e-07;6!CL:0000153;3.77e-07;9!CL:0000447;3.77e-07;9!CL:0002334;6.45e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.00e-15,76;CL:0000327,7.89e-10,15;CL:0002620,2.73e-08,23;CL:0002580,4.96e-08,3;CL:0000058,2.10e-07,6;CL:0000138,2.10e-07,6;CL:0000499,2.16e-07,28;CL:0000197,4.81e-07,6;CL:0000098,4.81e-07,6;CL:0002167,4.81e-07,6;CL:0000153,4.94e-07,9;CL:0000447,4.94e-07,9;CL:0002334,6.17e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;1.52e-07;5!DOID:450;1.52e-07;5!DOID:66;1.52e-07;5!DOID:423;1.52e-07;5!DOID:0080000;1.52e-07;5!DOID:11722;1.52e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.30e-07,5;DOID:450,1.30e-07,5;DOID:66,1.30e-07,5;DOID:423,1.30e-07,5;DOID:0080000,1.30e-07,5;DOID:11722,1.30e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!5.80e-17!84;UBERON:0002049!9.40e-16!79;UBERON:0007798!9.40e-16!79;UBERON:0000055!8.99e-15!69;UBERON:0004535!3.00e-14!110;UBERON:0001981!5.73e-14!60;UBERON:0007500!5.73e-14!60;UBERON:0004537!5.73e-14!60;UBERON:0006965!5.73e-14!60;UBERON:0001637!6.66e-14!42;UBERON:0003509!6.66e-14!42;UBERON:0004572!6.66e-14!42;UBERON:0001009!6.92e-14!113;UBERON:0004573!3.02e-10!33;UBERON:0004571!3.02e-10!33;UBERON:0003914!3.24e-10!118;UBERON:0002385!1.21e-08!63;UBERON:0001015!1.21e-08!63;UBERON:0000383!1.21e-08!63;UBERON:0001134!1.36e-08!61;UBERON:0002036!1.36e-08!61;UBERON:0003082!1.36e-08!61;UBERON:0000948!1.57e-07!24;UBERON:0005498!1.57e-07!24;UBERON:0004140!1.57e-07!24;UBERON:0009881!1.57e-07!24;UBERON:0004141!1.57e-07!24;UBERON:0003084!1.57e-07!24;UBERON:0007005!1.57e-07!24;UBERON:0004139!1.57e-07!24;UBERON:0004291!1.57e-07!24;UBERON:0000477!3.53e-07!286;UBERON:0004290!7.51e-07!70;UBERON:0007100!8.62e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.32e-10;33!UBERON:0004571;1.32e-10;33!UBERON:0000947;3.67e-10;21!UBERON:0010191;3.67e-10;21!UBERON:0001637;1.78e-09;42!UBERON:0003509;1.78e-09;42!UBERON:0004572;1.78e-09;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004573,2.62e-11,33;UBERON:0004571,2.62e-11,33;UBERON:0001637,8.34e-11,42;UBERON:0003509,8.34e-11,42;UBERON:0004572,8.34e-11,42;UBERON:0000947,4.86e-10,21;UBERON:0010191,4.86e-10,21;UBERON:0007500,9.53e-09,59;UBERON:0001981,9.53e-09,59;UBERON:0004537,9.53e-09,59;UBERON:0006965,9.53e-09,59;UBERON:0002049,2.30e-08,78;UBERON:0007798,2.30e-08,78;UBERON:0000055,5.00e-08,68;UBERON:0002097,5.21e-08,41;UBERON:0002199,6.95e-08,46;UBERON:0002416,6.95e-08,46 | |||
|phase1_expression=0.726713517082227,1.07050261945492,0.281908808191942,0,0.446961094427288,0.872338524100369,0,0,0,0,0,0,0,0.618831764800233,0,0.672325146451775,1.80808358407193,2.19093027116212,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.383587685530591,0,3.00802746381534,2.02785126545153,3.1811437882044,7.78615792484217,0,0.221729397462564,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0.39752481473341,0,1.04142150482278,0,0.838998872419812,0,0.208994966536811,0,0,0.33472061276467,0,0,0.488124115096339,0,4.0507097394088,0.714397826272638,0,0,1.53316637465883,0,0.732806975721629,0,0,0,2.98183171017191,2.78587125662075,0,6.3104056564739,1.06400514659507,0,5.33744978648525,1.97334038733728,0.311211035399766,0.404132016209064,0.653847612453835,3.02714855289863,2.88087962239999,0,0,0,0,0,0,0,0,0.368502951935304,0,0,0.989067717114227,0.910161361938026,0,0,0.125118519871964,0,0,0,0.600952235626387,0.680593098960126,1.07633781413317,1.70845911054854,0.847727604638247,1.80054657650641,1.23663035086127,0.772921620136887,1.11670113798954,2.70042131586026,2.14361411354637,0.252433774244115,1.28869858099219,2.90962902273861,1.06502877754984,0.906768884048762,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,1.39310378409594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0.122988438543114,0.343135620597051,0,0,0,0,0,0,0,0,0,0.721832238805369,1.85194205030644,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0,0,0,2.80327710863402,0.43596006883328,2.7868548611961,0.904902010304444,0,1.690605505112,0.531876233169741,0,0.257207374262142,0,0,0.142977993658148,1.08524321078289,0,0,0,0,0,0,0,0,0,0,2.87549826589899,4.59447743336456,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0.858840442033979,1.50051156317903,0,3.74347550755453,6.24501460790066,2.52323864054295,1.05427273493442,3.61135319673263,11.3703752027992,0,0.664225598535437,1.65932251687533,0.173767228936166,6.2656370388077,3.77457766191941,0,0,0,0,0,0,1.48864684691266,1.84154367945675,2.52594084989766,0.896974044789907,4.09365799253363,3.37793234401576,0,0.771048469013278,1.06537035187876,0.246381468041427,0,0.348631135379878,0,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,9.25363516141736,0.270946437543853,0,0.254876273045038,0,0,0,0,0,0,0,0.412164046590889,0,0,0.574265537996172,0,0,0.676695028044854,0.308097234229289,0.15350367472613,0.137836572484531,0.537101224341368,0,0.426133137080504,2.04773681987496,0,0,0,0,0.464845549297286,3.77774816196768,0,1.23213432070436,0,0,1.48259375283136,0.286249773483982,0,0.632758849437452,0,0.255897791311334,0,0.318203247925937,1.56989728039846,0,0,0,0.404364963146632,1.58510321173008,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,1.13008116620243,0.551365343546124,0.66343897524122,1.31535265576129,0,0,0.608731130888112,0.92947049429925,0.563391205064483,0,0.196498082026242,1.07001315444375,0,1.26664581178598,0.329294892959902,0,0,0,0.670302275535787,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0,0,0,0,6.97367958878744,0.276283915531148,0,0,0,1.86623752597084,0,0,0,0.591860433821602,0,0,0,0.278304294485554,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0.923403102045565,0,0,0,0,0,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,1.13735843331278,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.290967049465258,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.640358984218058,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,2.23425921017803,0,0.717873024576814,0.199679000498991,0,0,0.268733889946905,2.16179930125442,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182248669974074,0,0.236417121897595,0.419636705079985,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0.453248366080503,0.732761168390412,0,0,0.13223260174269,0,0,0.320362237703084,0.628817220398664,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.447764408660622,0.701139929541673,0,0.757612021100357,0.50313580350515,0,0.457680136793847,0,0.932623203496683,0.591420599958536,0.318593534327405,0,0.310525913752519,0.414706207840855,0.797525143673985,0,0.300515217994437,0,0.406870733204662,0.181848659202559,0.107410557042488,0.464033759878494,0,0,1.71697852591396,0.673498977531838,0,0,0,0.260994291965212,0.226705925512272,0,0,0,0.617602894321944,2.41212454536578,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.629063767423586,0,0,0,0,0,0,0,0,1.76337971845342,0,0,0,0.159633859057151,0,0,0.0691572524642179,0.161475645631851,0,0,0,0,0,1.144146286401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| |||
|short_description=p25@BGN | |||
}} |
Revision as of 07:24, 23 January 2014
Short description: | p25@BGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_BGN_5end |
Coexpression cluster: | C288_Chondrocyte_Renal_Pericytes_Fibroblast_aorta_Smooth_Meningeal |
Association with transcript: | -33bp_to_U11686_5end |
EntrezGene: | BGN |
HGNC: | 1044 |
UniProt: | P21810 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.00e-15 | 76 |
extracellular matrix secreting cell | 7.89e-10 | 15 |
skin fibroblast | 2.73e-08 | 23 |
preadipocyte of the breast | 4.96e-08 | 3 |
chondroblast | 2.10e-07 | 6 |
chondrocyte | 2.10e-07 | 6 |
stromal cell | 2.16e-07 | 28 |
receptor cell | 4.81e-07 | 6 |
sensory epithelial cell | 4.81e-07 | 6 |
olfactory epithelial cell | 4.81e-07 | 6 |
GAG secreting cell | 4.94e-07 | 9 |
carbohydrate secreting cell | 4.94e-07 | 9 |
preadipocyte | 6.17e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
systemic artery | 2.62e-11 | 33 |
systemic arterial system | 2.62e-11 | 33 |
artery | 8.34e-11 | 42 |
arterial blood vessel | 8.34e-11 | 42 |
arterial system | 8.34e-11 | 42 |
aorta | 4.86e-10 | 21 |
aortic system | 4.86e-10 | 21 |
epithelial tube open at both ends | 9.53e-09 | 59 |
blood vessel | 9.53e-09 | 59 |
blood vasculature | 9.53e-09 | 59 |
vascular cord | 9.53e-09 | 59 |
vasculature | 2.30e-08 | 78 |
vascular system | 2.30e-08 | 78 |
vessel | 5.00e-08 | 68 |
skin of body | 5.21e-08 | 41 |
integument | 6.95e-08 | 46 |
integumental system | 6.95e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.30e-07 | 5 |
myotonic disease | 1.30e-07 | 5 |
muscle tissue disease | 1.30e-07 | 5 |
myopathy | 1.30e-07 | 5 |
muscular disease | 1.30e-07 | 5 |
myotonic dystrophy | 1.30e-07 | 5 |