FFCP PHASE1:Hg19::chrX:114594418..114594424,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:114594418..114594424,+ | |||
|id=chrX:114594418..114594424,+ | |||
|ontology_enrichment_celltype=CL:0001014!1.02e-12!2;CL:0001016!1.02e-12!2;CL:0000064!9.59e-08!3;CL:0005012!9.59e-08!3;CL:0000067!9.59e-08!3;CL:0002304!9.59e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0001014;8.11e-41;2!CL:0001016;8.11e-41;2!CL:0000453;5.24e-17;5!CL:0000840;2.41e-14;5!CL:0002589;3.89e-11;2!CL:0000062;6.34e-10;9!CL:0000990;6.93e-10;8!CL:0000451;2.97e-08;10!CL:0002564;5.54e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,8.98e-41,2;CL:0001016,8.98e-41,2;CL:0000453,5.45e-17,5;CL:0000840,2.49e-14,5;CL:0001029,2.49e-14,5;CL:0002589,3.35e-11,2;CL:0000990,7.08e-10,8;CL:0000062,2.72e-08,11;CL:0000375,2.72e-08,11;CL:0000335,2.72e-08,11;CL:0000451,3.03e-08,10;CL:0002564,5.54e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0010115;4.22e-21;1!UBERON:0006965;3.89e-11;2!CL:0000335;2.77e-08;11 | |||
|ontology_enrichment_disease=DOID:3193!3.00e-12!2;DOID:962!3.00e-12!2;DOID:1192!1.90e-08!3 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.54e-09!79;UBERON:0007798!6.54e-09!79;UBERON:0003978!3.29e-08!3;UBERON:0009751!3.29e-08!3;UBERON:0000946!3.29e-08!3;UBERON:0002523!3.29e-08!3;UBERON:0005983!3.29e-08!3;UBERON:0002165!3.29e-08!3;UBERON:0002062!3.29e-08!3;UBERON:0007280!3.29e-08!3;UBERON:0004535!6.50e-08!110;UBERON:0001778!9.59e-08!3;UBERON:0001775!9.59e-08!3;UBERON:0001009!1.26e-07!113;UBERON:0001981!2.52e-07!60;UBERON:0007500!2.52e-07!60;UBERON:0004537!2.52e-07!60;UBERON:0006965!2.52e-07!60;UBERON:0004573!2.58e-07!33;UBERON:0004571!2.58e-07!33;UBERON:0002363!3.95e-07!1;UBERON:0007647!3.95e-07!1;UBERON:0010115!3.95e-07!1;UBERON:0004872!5.07e-07!84;UBERON:0002146!7.82e-07!1;UBERON:0005623!7.82e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002363;4.22e-21;1!UBERON:0004765;1.17e-12;26!UBERON:0002360;3.02e-11;2!UBERON:0000094;3.02e-11;2!UBERON:0010743;3.02e-11;2!UBERON:0001529;3.89e-11;2!UBERON:0007204;3.89e-11;2!UBERON:0001474;1.24e-10;18!UBERON:0001434;4.59e-08;36!UBERON:0002242;5.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002363,4.22e-21,1;UBERON:0007645,4.22e-21,1;UBERON:0007647,4.22e-21,1;UBERON:0010115,4.22e-21,1;UBERON:0002360,3.02e-11,2;UBERON:0000094,3.02e-11,2;UBERON:0010743,3.02e-11,2;UBERON:0001529,3.35e-11,2;UBERON:0007204,3.35e-11,2;UBERON:0002242,5.54e-08,3;UBERON:0003068,5.54e-08,3;UBERON:0002328,5.54e-08,3;UBERON:0004880,5.54e-08,3;UBERON:0004765,8.02e-08,90;UBERON:0001434,4.97e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.50153468953709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.60752969292428,14.8517099857058,0,0,0,0,0.154048617114644,0,0,0,0,0,0.178064071293475,0,0,0,0,0,0,0,0,0.532306030317022,0,0,1.86062352764589,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19548792950642,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40109002588254,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.398329059296,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50940741051545,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0.558644917973244,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:114594418..114594424,+ | |||
}} |
Revision as of 06:40, 23 January 2014
Short description: | p@chrX:114594418..114594424, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:114594418..114594424, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 8.98e-41 | 2 |
immature CD1a-positive Langerhans cell | 8.98e-41 | 2 |
Langerhans cell | 5.45e-17 | 5 |
immature conventional dendritic cell | 2.49e-14 | 5 |
common dendritic progenitor | 2.49e-14 | 5 |
smooth muscle cell of the brachiocephalic vasculature | 3.35e-11 | 2 |
conventional dendritic cell | 7.08e-10 | 8 |
osteoblast | 2.72e-08 | 11 |
osteoprogenitor cell | 2.72e-08 | 11 |
mesenchyme condensation cell | 2.72e-08 | 11 |
dendritic cell | 3.03e-08 | 10 |
nucleus pulposus cell of intervertebral disc | 5.54e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
dura mater | 4.22e-21 | 1 |
future meninx | 4.22e-21 | 1 |
ectomeninx | 4.22e-21 | 1 |
future dura mater | 4.22e-21 | 1 |
meninx | 3.02e-11 | 2 |
membrane organ | 3.02e-11 | 2 |
meningeal cluster | 3.02e-11 | 2 |
brachiocephalic artery | 3.35e-11 | 2 |
brachiocephalic vasculature | 3.35e-11 | 2 |
nucleus pulposus | 5.54e-08 | 3 |
axial mesoderm | 5.54e-08 | 3 |
notochord | 5.54e-08 | 3 |
chordamesoderm | 5.54e-08 | 3 |
skeletal element | 8.02e-08 | 90 |
skeletal system | 4.97e-07 | 100 |