FFCP PHASE1:Hg19::chr9:86983624..86983647,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64078 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16484 | |||
|TSSclassifier=not | |||
|UniProt=Q9HAS3 | |||
|association_with_transcript=-211bp_to_NM_022127,uc004anu.1_5end | |||
|coexpression_cluster_id=C166 | |||
|description=CAGE_peak_2_at_SLC28A3_5end | |||
|id=chr9:86983624..86983647,- | |||
|ontology_enrichment_celltype=CL:0000557!3.54e-20!71;CL:0000766!8.08e-20!76;CL:0000763!8.87e-20!112;CL:0000049!8.87e-20!112;CL:0000839!9.29e-19!70;CL:0002194!5.40e-16!63;CL:0000576!5.40e-16!63;CL:0000040!5.40e-16!63;CL:0000559!5.40e-16!63;CL:0002009!2.55e-15!65;CL:0000037!1.93e-11!172;CL:0000566!1.93e-11!172;CL:0002032!1.94e-11!165;CL:0000837!1.94e-11!165;CL:0000988!2.63e-10!182;CL:0002057!9.82e-09!42;CL:0002031!1.31e-08!124;CL:0000738!2.38e-08!140;CL:0000860!6.10e-08!45;CL:0002393!2.36e-07!9;CL:0002397!2.36e-07!9;CL:0000235!4.19e-07!10;CL:0002536!8.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.58e-27;6!CL:0002536;1.00e-20;2!CL:0000097;7.38e-19;5!CL:0000840;1.66e-15;5!CL:0000349;7.82e-13;19!CL:0002032;2.82e-11;1!CL:0000557;2.82e-11;1!CL:0000163;9.80e-11;9!CL:0000990;1.58e-10;8!CL:0002537;8.50e-09;5!CL:0000451;1.04e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.06e-27,6;CL:0002536,1.17e-20,2;CL:0000097,6.74e-19,5;CL:0002028,6.74e-19,5;CL:0000557,2.90e-16,67;CL:0000763,7.13e-16,108;CL:0000049,7.13e-16,108;CL:0000840,1.36e-15,5;CL:0001029,1.36e-15,5;CL:0000839,1.27e-13,66;CL:0000349,8.22e-13,19;CL:0000766,2.19e-12,72;CL:0002032,1.20e-11,161;CL:0000837,1.20e-11,161;CL:0000037,4.58e-11,168;CL:0000163,9.32e-11,9;CL:0000990,1.38e-10,8;CL:0000988,2.19e-10,177;CL:0000451,9.38e-09,10;CL:0002537,9.57e-09,5;CL:0002031,1.89e-08,120;CL:0002194,1.57e-07,59;CL:0000576,1.57e-07,59;CL:0000040,1.57e-07,59;CL:0000559,1.57e-07,59;CL:0000738,2.88e-07,136;CL:0002009,2.90e-07,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.37e-18!80;UBERON:0001474!9.01e-17!86;UBERON:0002390!2.79e-15!102;UBERON:0003061!2.79e-15!102;UBERON:0002405!8.14e-15!115;UBERON:0002193!3.21e-13!112;UBERON:0004765!3.44e-13!101;UBERON:0001434!3.44e-13!101;UBERON:0003081!3.67e-12!216;UBERON:0002204!1.58e-08!167;UBERON:0000305!9.73e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;1.02e-22;7!UBERON:0005631;5.37e-16;10!UBERON:0000158;5.37e-16;10!UBERON:0000478;3.86e-10;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,1.32e-22,7;UBERON:0004871,7.99e-20,8;UBERON:0005631,2.10e-17,14;UBERON:0000158,2.10e-17,14;UBERON:0002371,3.57e-14,76;UBERON:0001474,4.96e-13,82;UBERON:0004765,9.69e-12,90;UBERON:0002405,2.59e-11,93;UBERON:0002390,1.17e-10,98;UBERON:0003061,1.17e-10,98;UBERON:0001434,2.05e-10,100;UBERON:0000478,4.01e-10,24;UBERON:0003081,4.39e-10,203;UBERON:0002193,1.58e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.27662058195258,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0.553995408531877,0,0,0.223915474239924,0,0,0.145398238779565,0,0,0.232429036905685,0.411167888021826,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0.426224750532694,0,0,0.622822248995575,0,0.521482918420201,0,0,0,0,0.633765858935825,0.850417199860174,0,0.112328631146495,0,0,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0,0,0.087834785693126,0.261958150995425,0,0,2.92092654289215,1.56716763569341,4.65352861816028,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,40.9507463993666,25.5645599136613,0,0,0,0,0,0,0,0,5.1832028885193,3.31475892859011,3.91351543621778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0.099972991182057,1.2162378064119,0,4.21667878966063,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81434175997808,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.59697552219644,0,0,0.94007937463814,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,1.4098700508785,0,0.293016358543788,0,5.01495229248653,0,2.3874448473769,0,1.22864280839693,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,4.09257896181497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,2.55493176133945,0.859530882839914,0,0,0,0.717873024576814,0,0,0.223171457441873,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0,0,0,0,0,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,0,0,0,0.322289439867886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218531143927391,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SLC28A3 | |||
}} |
Revision as of 01:54, 23 January 2014
Short description: | p2@SLC28A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC28A3_5end |
Coexpression cluster: | C166_Macrophage_Monocytederived_Dendritic_adipose_lymph_CD14_lung |
Association with transcript: | -211bp_to_NM_022127, uc004anu.1_5end |
EntrezGene: | SLC28A3 |
HGNC: | 16484 |
UniProt: | Q9HAS3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.06e-27 | 6 |
amniotic epithelial cell | 1.17e-20 | 2 |
mast cell | 6.74e-19 | 5 |
basophil mast progenitor cell | 6.74e-19 | 5 |
granulocyte monocyte progenitor cell | 2.90e-16 | 67 |
myeloid cell | 7.13e-16 | 108 |
common myeloid progenitor | 7.13e-16 | 108 |
immature conventional dendritic cell | 1.36e-15 | 5 |
common dendritic progenitor | 1.36e-15 | 5 |
myeloid lineage restricted progenitor cell | 1.27e-13 | 66 |
extraembryonic cell | 8.22e-13 | 19 |
myeloid leukocyte | 2.19e-12 | 72 |
hematopoietic oligopotent progenitor cell | 1.20e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.20e-11 | 161 |
hematopoietic stem cell | 4.58e-11 | 168 |
endocrine cell | 9.32e-11 | 9 |
conventional dendritic cell | 1.38e-10 | 8 |
hematopoietic cell | 2.19e-10 | 177 |
dendritic cell | 9.38e-09 | 10 |
amnion mesenchymal stem cell | 9.57e-09 | 5 |
hematopoietic lineage restricted progenitor cell | 1.89e-08 | 120 |
monopoietic cell | 1.57e-07 | 59 |
monocyte | 1.57e-07 | 59 |
monoblast | 1.57e-07 | 59 |
promonocyte | 1.57e-07 | 59 |
leukocyte | 2.88e-07 | 136 |
macrophage dendritic cell progenitor | 2.90e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
amnion | 1.32e-22 | 7 |
somatic layer of lateral plate mesoderm | 7.99e-20 | 8 |
extraembryonic membrane | 2.10e-17 | 14 |
membranous layer | 2.10e-17 | 14 |
bone marrow | 3.57e-14 | 76 |
bone element | 4.96e-13 | 82 |
skeletal element | 9.69e-12 | 90 |
immune system | 2.59e-11 | 93 |
hematopoietic system | 1.17e-10 | 98 |
blood island | 1.17e-10 | 98 |
skeletal system | 2.05e-10 | 100 |
extraembryonic structure | 4.01e-10 | 24 |
lateral plate mesoderm | 4.39e-10 | 203 |
hemolymphoid system | 1.58e-09 | 108 |