FFCP PHASE1:Hg19::chr9:35685692..35685745,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7169 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12011 | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=-152bp_to_ENST00000486018_5end | |||
|coexpression_cluster_id=C31 | |||
|description=CAGE_peak_2_at_TPM2_5end | |||
|id=chr9:35685692..35685745,- | |||
|ontology_enrichment_celltype=CL:0000055!1.61e-30!180;CL:0000680!2.71e-19!57;CL:0000056!2.71e-19!57;CL:0000355!2.71e-19!57;CL:0000183!1.87e-18!59;CL:0000187!3.81e-18!54;CL:0000393!9.73e-16!60;CL:0000211!9.73e-16!60;CL:0000192!3.38e-15!42;CL:0000514!3.38e-15!42;CL:0000057!1.77e-14!75;CL:0000359!6.87e-13!32;CL:0000222!6.28e-12!119 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.94e-14;32!CL:0000192;4.34e-13;43!CL:0000187;8.81e-12;55!CL:0000393;1.41e-09;61!CL:0000211;1.41e-09;61!CL:0002620;1.88e-07;23!CL:0000057;7.31e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.05e-23,58;CL:0000056,3.05e-23,58;CL:0000355,3.05e-23,58;CL:0000187,7.77e-22,55;CL:0000192,8.03e-19,43;CL:0000514,8.03e-19,43;CL:0000393,2.82e-18,61;CL:0000211,2.82e-18,61;CL:0000057,5.52e-17,76;CL:0000359,2.02e-15,32;CL:0000222,1.46e-11,121;CL:0002620,9.29e-08,23 | |||
|ontology_enrichment_development_v019=CL:0000514;4.34e-13;43!CL:0000355;5.84e-12;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.93e-26!83;UBERON:0002329!6.93e-26!83;UBERON:0003077!6.93e-26!83;UBERON:0003059!6.93e-26!83;UBERON:0007282!6.93e-26!83;UBERON:0009618!6.93e-26!83;UBERON:0007285!6.93e-26!83;UBERON:0004290!1.80e-24!70;UBERON:0002385!4.99e-22!63;UBERON:0001015!4.99e-22!63;UBERON:0000383!4.99e-22!63;UBERON:0001134!5.99e-22!61;UBERON:0002036!5.99e-22!61;UBERON:0003082!5.99e-22!61;UBERON:0000486!3.22e-19!82;UBERON:0005256!6.80e-18!143;UBERON:0003104!1.01e-15!238;UBERON:0009142!1.01e-15!238;UBERON:0000481!1.34e-14!347;UBERON:0002100!1.42e-14!216;UBERON:0000475!1.41e-12!365;UBERON:0001637!2.28e-11!42;UBERON:0003509!2.28e-11!42;UBERON:0004572!2.28e-11!42;UBERON:0000468!1.30e-10!659;UBERON:0004872!1.47e-10!84;UBERON:0001981!3.67e-10!60;UBERON:0007500!3.67e-10!60;UBERON:0004537!3.67e-10!60;UBERON:0006965!3.67e-10!60;UBERON:0000490!3.05e-09!138;UBERON:0004573!5.32e-09!33;UBERON:0004571!5.32e-09!33;UBERON:0002049!5.67e-09!79;UBERON:0007798!5.67e-09!79;UBERON:0003102!1.68e-08!95;UBERON:0000926!4.75e-08!448;UBERON:0004120!4.75e-08!448;UBERON:0006603!4.75e-08!448;UBERON:0000055!1.35e-07!69;UBERON:0007100!1.82e-07!27;UBERON:0003914!3.45e-07!118;UBERON:0001009!6.49e-07!113;UBERON:0000467!6.50e-07!625;UBERON:0000480!9.65e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;2.10e-13;31!UBERON:0001015;2.10e-13;31!UBERON:0000383;2.10e-13;31!UBERON:0004573;5.12e-09;33!UBERON:0004571;5.12e-09;33!UBERON:0001134;7.77e-09;16!UBERON:0002036;7.77e-09;16!UBERON:0002204;1.22e-08;70!UBERON:0001637;1.28e-08;42!UBERON:0003509;1.28e-08;42!UBERON:0004572;1.28e-08;42!UBERON:0007100;3.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,1.37e-29,71;UBERON:0003059,1.37e-29,71;UBERON:0007282,1.37e-29,71;UBERON:0004290,1.37e-29,71;UBERON:0009618,1.37e-29,71;UBERON:0007524,1.80e-29,73;UBERON:0007503,5.98e-29,78;UBERON:0003077,8.93e-29,72;UBERON:0007285,8.93e-29,72;UBERON:0001134,1.74e-26,62;UBERON:0002036,1.74e-26,62;UBERON:0003082,1.74e-26,62;UBERON:0002385,1.87e-26,64;UBERON:0001015,1.87e-26,64;UBERON:0000383,1.87e-26,64;UBERON:0000486,6.06e-23,83;UBERON:0005256,7.82e-22,122;UBERON:0003104,1.02e-19,160;UBERON:0009142,1.02e-19,160;UBERON:0002100,5.40e-14,199;UBERON:0001637,5.64e-13,42;UBERON:0003509,5.64e-13,42;UBERON:0004572,5.64e-13,42;UBERON:0000490,1.28e-12,148;UBERON:0004872,9.38e-11,83;UBERON:0004573,1.61e-10,33;UBERON:0004571,1.61e-10,33;UBERON:0007500,6.31e-10,59;UBERON:0001981,6.31e-10,59;UBERON:0004537,6.31e-10,59;UBERON:0006965,6.31e-10,59;UBERON:0000926,8.36e-10,315;UBERON:0004120,8.36e-10,315;UBERON:0006603,8.36e-10,315;UBERON:0003102,3.78e-09,99;UBERON:0002049,7.15e-09,78;UBERON:0007798,7.15e-09,78;UBERON:0001009,4.38e-08,112;UBERON:0000055,5.53e-08,68;UBERON:0002199,1.43e-07,46;UBERON:0002416,1.43e-07,46;UBERON:0003914,1.91e-07,117;UBERON:0007100,1.95e-07,27;UBERON:0004535,2.90e-07,109;UBERON:0002204,4.77e-07,167;UBERON:0002097,8.95e-07,41 | |||
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| |||
|short_description=p2@TPM2 | |||
}} |
Revision as of 01:23, 23 January 2014
Short description: | p2@TPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TPM2_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | -152bp_to_ENST00000486018_5end |
EntrezGene: | TPM2 |
HGNC: | 12011 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.05e-23 | 58 |
myoblast | 3.05e-23 | 58 |
multi-potent skeletal muscle stem cell | 3.05e-23 | 58 |
muscle cell | 7.77e-22 | 55 |
smooth muscle cell | 8.03e-19 | 43 |
smooth muscle myoblast | 8.03e-19 | 43 |
electrically responsive cell | 2.82e-18 | 61 |
electrically active cell | 2.82e-18 | 61 |
fibroblast | 5.52e-17 | 76 |
vascular associated smooth muscle cell | 2.02e-15 | 32 |
mesodermal cell | 1.46e-11 | 121 |
skin fibroblast | 9.29e-08 | 23 |