FFCP PHASE1:Mm9::chr6:113451944..113451957,-: Difference between revisions
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{{FFCP|EntrezGene=210673|HGNC=|MCL_coexpression_id=1|UniProt=Q8BG44|association_with_transcript=-57bp_to_ENSMUST00000057429,uc009dgq.1,uc009dgr.1,uc009dgs.1,uc009dgt.1_5end|description=CAGE_peak_2_at_Prrt3_5end|id=chr6:113451944..113451957,-|ontology_enrichment_celltype=CL:0000117!3.70e-13!23;CL:0000337!3.70e-13!23;CL:0000540!4.36e-12!33;CL:0000047!4.36e-12!33;CL:0000031!4.36e-12!33;CL:0000404!4.36e-12!33;CL:0000221!2.89e-09!44;CL:0000133!2.89e-09!44;CL:0002319!9.82e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,5.03e-16,23;CL:0000337,5.03e-16,23;CL:0000540,2.07e-11,33;CL:0000047,2.07e-11,33;CL:0000031,2.07e-11,33;CL:0000404,2.07e-11,33;CL:0000393,4.76e-09,39;CL:0000211,4.76e-09,39;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44;CL:0002319,7.49e-08,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0000073!9.18e-32!75;UBERON:0001016!9.18e-32!75;UBERON:0000033!9.63e-32!63;UBERON:0001049!5.32e-29!52;UBERON:0005068!5.32e-29!52;UBERON:0006241!5.32e-29!52;UBERON:0007135!5.32e-29!52;UBERON:0004121!6.70e-29!102;UBERON:0000924!6.70e-29!102;UBERON:0006601!6.70e-29!102;UBERON:0002346!2.30e-28!71;UBERON:0003075!2.30e-28!71;UBERON:0007284!2.30e-28!71;UBERON:0000955!1.58e-27!50;UBERON:0006238!1.58e-27!50;UBERON:0003056!5.00e-27!49;UBERON:0002616!9.90e-27!49;UBERON:0003080!9.48e-23!40;UBERON:0002780!6.23e-22!39;UBERON:0001890!6.23e-22!39;UBERON:0006240!6.23e-22!39;UBERON:0002020!1.41e-19!34;UBERON:0007811!3.53e-19!86;UBERON:0000153!3.74e-17!94;UBERON:0002791!5.19e-16!29;UBERON:0003528!5.19e-16!29;UBERON:0001893!5.19e-16!29;UBERON:0000956!8.25e-11!21;UBERON:0001869!8.25e-11!21;UBERON:0000203!8.25e-11!21;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0002619!7.37e-09!17;UBERON:0001894!7.34e-07!10;UBERON:0006222!7.34e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-44,54;UBERON:0001017,9.82e-43,73;UBERON:0001016,2.49e-41,75;UBERON:0001049,2.92e-41,52;UBERON:0005068,2.92e-41,52;UBERON:0006241,2.92e-41,52;UBERON:0007135,2.92e-41,52;UBERON:0004121,7.60e-34,95;UBERON:0000924,7.60e-34,95;UBERON:0006601,7.60e-34,95;UBERON:0002346,1.08e-33,64;UBERON:0003075,1.08e-33,64;UBERON:0007284,1.08e-33,64;UBERON:0000955,1.64e-33,47;UBERON:0006238,1.64e-33,47;UBERON:0002616,5.24e-32,46;UBERON:0010371,5.56e-32,73;UBERON:0002020,2.29e-30,34;UBERON:0003080,2.61e-27,40;UBERON:0002780,8.81e-26,39;UBERON:0001890,8.81e-26,39;UBERON:0006240,8.81e-26,39;UBERON:0010314,2.00e-23,92;UBERON:0003528,4.27e-23,29;UBERON:0002791,4.27e-23,29;UBERON:0001893,4.27e-23,29;UBERON:0003056,1.09e-22,49;UBERON:0002021,1.94e-20,10;UBERON:0000411,1.94e-20,10;UBERON:0001950,1.94e-20,10;UBERON:0002619,1.22e-15,17;UBERON:0000956,1.94e-14,21;UBERON:0001869,1.94e-14,21;UBERON:0000203,1.94e-14,21;UBERON:0004111,2.28e-14,122;UBERON:0003076,3.96e-14,12;UBERON:0003057,3.96e-14,12;UBERON:0000025,6.32e-14,114;UBERON:0011216,1.40e-10,194;UBERON:0002240,1.43e-10,6;UBERON:0005174,1.43e-10,6;UBERON:0001137,1.43e-10,6;UBERON:0002420,4.12e-10,8;UBERON:0007245,4.12e-10,8;UBERON:0010009,4.12e-10,8;UBERON:0010011,4.12e-10,8;UBERON:0000454,4.12e-10,8;UBERON:0001948,8.38e-09,5;UBERON:0002315,8.38e-09,5;UBERON:0000483,5.68e-08,174;UBERON:0000119,8.90e-08,176;UBERON:0002950,1.28e-07,4;UBERON:0001891,1.28e-07,4;UBERON:0009616,1.28e-07,4;UBERON:0010286,1.28e-07,4|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,4.57041575046086,3.3130281142742,0.979926393719632,0.191690942036473,0,7.70811166995721,7.91661496128164,5.9906547969935,1.45074916503213,2.01272815925301,0.52091337055676,9.21303896704557,1.68828783009504,3.20876320331301,6.18720029494702,2.70506193518296,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,4.81727425670947,0,0,0,0,7.78911324905078,10.980014467647,2.38743269014442,13.0368240144207,16.6215047264715,8.3115217823824,10.5456820994042,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.459804208866946,0.900310649026746,0.452114453507145,0.408218994907967,0.896796041993948,0.468508622798644,1.29351685369508,0,0.189106080167819,0.703804496655795,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,2.05809224758569,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.8807436590966,7.73597131508541,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.720244376125241,0.646793418913773,0.857348140126369,1.41872186913819,2.85390108163313,0.329098041204242,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.777804753376191,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2482997506608,14.7304075682297,10.8850147553485,10.6548973053086,10.2762377965596,10.5755145634558,10.1253375034771,14.4102785031751,10.4222754066367,11.39072685854,0.103787347584177,0.798049746802062,0.853668028770671,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.280924522409647,0.320125762024346,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,1.49886346762768,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.695603506861264|short_description=p2@Prrt3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:210673 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BG44 | |||
|association_with_transcript=-57bp_to_ENSMUST00000057429,uc009dgq.1,uc009dgr.1,uc009dgs.1,uc009dgt.1_5end | |||
|cluster_id=chr6:113451944..113451957,- | |||
|description=CAGE_peak_2_at_Prrt3_5end | |||
|id=chr6:113451944..113451957,- | |||
|ontology_enrichment_celltype=CL:0000117!3.70e-13!23;CL:0000337!3.70e-13!23;CL:0000540!4.36e-12!33;CL:0000047!4.36e-12!33;CL:0000031!4.36e-12!33;CL:0000404!4.36e-12!33;CL:0000221!2.89e-09!44;CL:0000133!2.89e-09!44;CL:0002319!9.82e-09!43;CL:0000393!1.06e-08!39;CL:0000211!1.06e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.03e-16,23;CL:0000337,5.03e-16,23;CL:0000540,2.07e-11,33;CL:0000047,2.07e-11,33;CL:0000031,2.07e-11,33;CL:0000404,2.07e-11,33;CL:0000393,4.76e-09,39;CL:0000211,4.76e-09,39;CL:0000221,1.12e-08,44;CL:0000133,1.12e-08,44;CL:0002319,7.49e-08,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.79e-32!73;UBERON:0005743!1.79e-32!73;UBERON:0000073!9.18e-32!75;UBERON:0001016!9.18e-32!75;UBERON:0000033!9.63e-32!63;UBERON:0001049!5.32e-29!52;UBERON:0005068!5.32e-29!52;UBERON:0006241!5.32e-29!52;UBERON:0007135!5.32e-29!52;UBERON:0004121!6.70e-29!102;UBERON:0000924!6.70e-29!102;UBERON:0006601!6.70e-29!102;UBERON:0002346!2.30e-28!71;UBERON:0003075!2.30e-28!71;UBERON:0007284!2.30e-28!71;UBERON:0000955!1.58e-27!50;UBERON:0006238!1.58e-27!50;UBERON:0003056!5.00e-27!49;UBERON:0002616!9.90e-27!49;UBERON:0003080!9.48e-23!40;UBERON:0002780!6.23e-22!39;UBERON:0001890!6.23e-22!39;UBERON:0006240!6.23e-22!39;UBERON:0002020!1.41e-19!34;UBERON:0007811!3.53e-19!86;UBERON:0000153!3.74e-17!94;UBERON:0002791!5.19e-16!29;UBERON:0003528!5.19e-16!29;UBERON:0001893!5.19e-16!29;UBERON:0000956!8.25e-11!21;UBERON:0001869!8.25e-11!21;UBERON:0000203!8.25e-11!21;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0002619!7.37e-09!17;UBERON:0001894!7.34e-07!10;UBERON:0006222!7.34e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.70e-44,54;UBERON:0001017,9.82e-43,73;UBERON:0001016,2.49e-41,75;UBERON:0001049,2.92e-41,52;UBERON:0005068,2.92e-41,52;UBERON:0006241,2.92e-41,52;UBERON:0007135,2.92e-41,52;UBERON:0004121,7.60e-34,95;UBERON:0000924,7.60e-34,95;UBERON:0006601,7.60e-34,95;UBERON:0002346,1.08e-33,64;UBERON:0003075,1.08e-33,64;UBERON:0007284,1.08e-33,64;UBERON:0000955,1.64e-33,47;UBERON:0006238,1.64e-33,47;UBERON:0002616,5.24e-32,46;UBERON:0010371,5.56e-32,73;UBERON:0002020,2.29e-30,34;UBERON:0003080,2.61e-27,40;UBERON:0002780,8.81e-26,39;UBERON:0001890,8.81e-26,39;UBERON:0006240,8.81e-26,39;UBERON:0010314,2.00e-23,92;UBERON:0003528,4.27e-23,29;UBERON:0002791,4.27e-23,29;UBERON:0001893,4.27e-23,29;UBERON:0003056,1.09e-22,49;UBERON:0002021,1.94e-20,10;UBERON:0000411,1.94e-20,10;UBERON:0001950,1.94e-20,10;UBERON:0002619,1.22e-15,17;UBERON:0000956,1.94e-14,21;UBERON:0001869,1.94e-14,21;UBERON:0000203,1.94e-14,21;UBERON:0004111,2.28e-14,122;UBERON:0003076,3.96e-14,12;UBERON:0003057,3.96e-14,12;UBERON:0000025,6.32e-14,114;UBERON:0011216,1.40e-10,194;UBERON:0002240,1.43e-10,6;UBERON:0005174,1.43e-10,6;UBERON:0001137,1.43e-10,6;UBERON:0002420,4.12e-10,8;UBERON:0007245,4.12e-10,8;UBERON:0010009,4.12e-10,8;UBERON:0010011,4.12e-10,8;UBERON:0000454,4.12e-10,8;UBERON:0001948,8.38e-09,5;UBERON:0002315,8.38e-09,5;UBERON:0000483,5.68e-08,174;UBERON:0000119,8.90e-08,176;UBERON:0002950,1.28e-07,4;UBERON:0001891,1.28e-07,4;UBERON:0009616,1.28e-07,4;UBERON:0010286,1.28e-07,4 | |||
|phase1_expression=1.60148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38121212422995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,1.5869729378161,3.80298842103708,0,0,0,0,0.7104801149461,0,0.384218305321555,0.622137673850866,0.405017814995072,0.630974884054146,4.57041575046086,3.3130281142742,0.979926393719632,0.191690942036473,0,7.70811166995721,7.91661496128164,5.9906547969935,1.45074916503213,2.01272815925301,0.52091337055676,9.21303896704557,1.68828783009504,3.20876320331301,6.18720029494702,2.70506193518296,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,2.53518155598025,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,9.36898550436951,4.81727425670947,0,0,0,0,7.78911324905078,10.980014467647,2.38743269014442,13.0368240144207,16.6215047264715,8.3115217823824,10.5456820994042,0.101839363850316,0,0,0.420883711772948,0.650602214813519,0.459804208866946,0.900310649026746,0.452114453507145,0.408218994907967,0.896796041993948,0.468508622798644,1.29351685369508,0,0.189106080167819,0.703804496655795,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.2527577368216,2.05809224758569,0,0,0.213288250535234,0,0.257734922644187,0,0,0,0,0,0.251335208800269,0.198956472041151,0,0,0,0,0.189667900953082,0,0,0.407302655690628,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,11.8807436590966,7.73597131508541,0,0,0,0,0.215423397732799,0,0,0.566153061577665,0.404810701674894,0.292255857911312,0.790575555893047,4.4984984299053,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,2.7235168460303,0.720244376125241,0.646793418913773,0.857348140126369,1.41872186913819,2.85390108163313,0.329098041204242,0.608929898229199,0,0,0,0,0,0.0603129249281559,0,0,0,10.3838169125885,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.777804753376191,0,0,0,0.13020438484395,0.419437377702843,0,0,0,0.405450430580328,0.102710957164827,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2482997506608,14.7304075682297,10.8850147553485,10.6548973053086,10.2762377965596,10.5755145634558,10.1253375034771,14.4102785031751,10.4222754066367,11.39072685854,0.103787347584177,0.798049746802062,0.853668028770671,0.486213434136588,0,0,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0.754505365544305,0.280924522409647,0.320125762024346,0.459483751644906,0,0.695305955669133,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.145346416632329,0.941093804153306,0.507687647350059,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.237270036248348,0.29551344712669,0.409231043169689,0.77468420592983,0.385813221962283,1.49886346762768,0.233931608445408,0.429742108096597,0.57386499620653,0.441182838239031,0.695603506861264 | |||
|short_description=p2@Prrt3 | |||
}} |
Revision as of 22:12, 4 August 2015
Short description: | p2@Prrt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Prrt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -57bp_to_ENSMUST00000057429, uc009dgq.1, uc009dgr.1, uc009dgs.1, uc009dgt.1_5end |
EntrezGene: | 210673 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.03e-16 | 23 |
neuroblast (sensu Vertebrata) | 5.03e-16 | 23 |
neuron | 2.07e-11 | 33 |
neuronal stem cell | 2.07e-11 | 33 |
neuroblast | 2.07e-11 | 33 |
electrically signaling cell | 2.07e-11 | 33 |
electrically responsive cell | 4.76e-09 | 39 |
electrically active cell | 4.76e-09 | 39 |
ectodermal cell | 1.12e-08 | 44 |
neurectodermal cell | 1.12e-08 | 44 |
neural cell | 7.49e-08 | 43 |