FFCP PHASE1:Hg19::chr9:13165441..13165450,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=not supported | |||
|DPIdataset=robust | |||
|EntrezGene=8777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7208 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc011lmm.1_5end | |||
|coexpression_cluster_id=C735 | |||
|description=CAGE_peak_20_at_MPDZ_5end | |||
|id=chr9:13165441..13165450,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!8.93e-73!22;UBERON:0001869!2.86e-72!32;UBERON:0001893!5.78e-68!34;UBERON:0000956!4.42e-64!25;UBERON:0000203!4.42e-64!25;UBERON:0002791!2.37e-62!33;UBERON:0002020!1.74e-60!34;UBERON:0003528!1.74e-60!34;UBERON:0001950!8.56e-60!20;UBERON:0002780!4.04e-56!41;UBERON:0001890!4.04e-56!41;UBERON:0006240!4.04e-56!41;UBERON:0003080!9.63e-55!42;UBERON:0001017!1.40e-40!82;UBERON:0000955!6.94e-40!69;UBERON:0006238!6.94e-40!69;UBERON:0001049!9.04e-40!57;UBERON:0005068!9.04e-40!57;UBERON:0006241!9.04e-40!57;UBERON:0007135!9.04e-40!57;UBERON:0005743!1.43e-38!86;UBERON:0002616!2.44e-38!59;UBERON:0003056!5.34e-37!61;UBERON:0000073!1.19e-34!94;UBERON:0001016!1.19e-34!94;UBERON:0002346!1.41e-33!90;UBERON:0000200!3.18e-32!6;UBERON:0003075!8.06e-32!86;UBERON:0007284!8.06e-32!86;UBERON:0007023!1.30e-28!115;UBERON:0000349!2.56e-25!5;UBERON:0001871!2.62e-24!7;UBERON:0002771!5.35e-24!3;UBERON:0000033!1.36e-23!123;UBERON:0000153!2.41e-22!129;UBERON:0007811!2.41e-22!129;UBERON:0000924!2.76e-19!173;UBERON:0006601!2.76e-19!173;UBERON:0004121!6.60e-18!169;UBERON:0001954!1.37e-16!2;UBERON:0003022!1.37e-16!2;UBERON:0002421!1.37e-16!2;UBERON:0002600!1.37e-16!2;UBERON:0002360!4.40e-16!2;UBERON:0000094!4.40e-16!2;UBERON:0007645!4.40e-16!2;UBERON:0001872!1.33e-14!5;UBERON:0002021!2.41e-14!5;UBERON:0000025!1.62e-09!194;UBERON:0002022!2.22e-09!1;UBERON:0003112!2.82e-09!1;UBERON:0000032!2.82e-09!1;UBERON:0005253!2.82e-09!1;UBERON:0003128!2.82e-09!1;UBERON:0002241!2.82e-09!1;UBERON:0001703!2.82e-09!1;UBERON:0004761!2.82e-09!1;UBERON:0009617!2.82e-09!1;UBERON:0002581!3.31e-09!1;UBERON:0001882!4.19e-09!1;UBERON:0005403!4.19e-09!1;UBERON:0007190!5.31e-09!1;UBERON:0002902!1.07e-08!1;UBERON:0009899!1.07e-08!1;UBERON:0002363!1.16e-08!1;UBERON:0007647!1.16e-08!1;UBERON:0010115!1.16e-08!1;UBERON:0000369!1.58e-08!4;UBERON:0002435!1.58e-08!4;UBERON:0000204!1.58e-08!4;UBERON:0010082!1.58e-08!4;UBERON:0002420!2.70e-08!9;UBERON:0007245!2.70e-08!9;UBERON:0010009!2.70e-08!9;UBERON:0010011!2.70e-08!9;UBERON:0000454!2.70e-08!9;UBERON:0000064!4.68e-08!219;UBERON:0004111!5.08e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002022;1.81e-40;1!UBERON:0000349;1.33e-32;5!UBERON:0002619;4.22e-28;22!UBERON:0000956;5.82e-25;25!UBERON:0000203;5.82e-25;25!UBERON:0001954;3.11e-21;2!UBERON:0003022;3.11e-21;2!UBERON:0002421;3.11e-21;2!UBERON:0002600;3.11e-21;2!UBERON:0001876;5.15e-21;2!UBERON:0002791;4.94e-19;32!UBERON:0001869;4.94e-19;32!UBERON:0001950;1.01e-17;20!UBERON:0001893;1.39e-16;34!UBERON:0002780;1.85e-16;41!UBERON:0001890;1.85e-16;41!UBERON:0003528;1.10e-15;34!UBERON:0002020;1.10e-15;34!UBERON:0001016;1.43e-10;83!UBERON:0000073;2.84e-10;53!UBERON:0002616;2.84e-10;53!UBERON:0002021;3.10e-09;5!UBERON:0000955;1.02e-08;68!UBERON:0001871;5.86e-07;6!UBERON:0001017;8.90e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002022,3.30e-40,1;UBERON:0000349,1.44e-32,5;UBERON:0002619,4.68e-28,22;UBERON:0000956,6.39e-25,25;UBERON:0000203,6.39e-25,25;UBERON:0001954,3.11e-21,2;UBERON:0003022,3.11e-21,2;UBERON:0002421,3.11e-21,2;UBERON:0002600,3.11e-21,2;UBERON:0001876,5.70e-21,2;UBERON:0002791,8.18e-20,32;UBERON:0001869,8.18e-20,32;UBERON:0003528,9.96e-19,34;UBERON:0002020,9.96e-19,34;UBERON:0001893,9.96e-19,34;UBERON:0001950,1.10e-17,20;UBERON:0002780,9.75e-16,41;UBERON:0001890,9.75e-16,41;UBERON:0003080,9.75e-16,41;UBERON:0006240,9.75e-16,41;UBERON:0000955,9.02e-15,68;UBERON:0006238,9.02e-15,68;UBERON:0001017,1.45e-12,81;UBERON:0000073,2.11e-12,53;UBERON:0002616,2.11e-12,53;UBERON:0001049,8.70e-12,56;UBERON:0005068,8.70e-12,56;UBERON:0006241,8.70e-12,56;UBERON:0007135,8.70e-12,56;UBERON:0001016,2.13e-11,89;UBERON:0003056,6.84e-11,61;UBERON:0002021,2.97e-09,5;UBERON:0003075,2.69e-08,82;UBERON:0007284,2.69e-08,82;UBERON:0002346,6.09e-08,86;UBERON:0001871,6.04e-07,6 | |||
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|short_description=p20@MPDZ | |||
}} |
Revision as of 00:50, 23 January 2014
Short description: | p20@MPDZ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | No |
Description: | CAGE_peak_20_at_MPDZ_5end |
Coexpression cluster: | C735_hippocampus_medial_olfactory_amygdala_occipital_insula_middle |
Association with transcript: | 0bp_to_uc011lmm.1_5end |
EntrezGene: | MPDZ |
HGNC: | 7208 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insula | 3.30e-40 | 1 |
limbic system | 1.44e-32 | 5 |
regional part of cerebral cortex | 4.68e-28 | 22 |
cerebral cortex | 6.39e-25 | 25 |
pallium | 6.39e-25 | 25 |
Ammon's horn | 3.11e-21 | 2 |
lobe parts of cerebral cortex | 3.11e-21 | 2 |
hippocampal formation | 3.11e-21 | 2 |
limbic lobe | 3.11e-21 | 2 |
amygdala | 5.70e-21 | 2 |
regional part of telencephalon | 8.18e-20 | 32 |
cerebral hemisphere | 8.18e-20 | 32 |
brain grey matter | 9.96e-19 | 34 |
gray matter | 9.96e-19 | 34 |
telencephalon | 9.96e-19 | 34 |
neocortex | 1.10e-17 | 20 |
regional part of forebrain | 9.75e-16 | 41 |
forebrain | 9.75e-16 | 41 |
anterior neural tube | 9.75e-16 | 41 |
future forebrain | 9.75e-16 | 41 |
brain | 9.02e-15 | 68 |
future brain | 9.02e-15 | 68 |
central nervous system | 1.45e-12 | 81 |
regional part of nervous system | 2.11e-12 | 53 |
regional part of brain | 2.11e-12 | 53 |
neural tube | 8.70e-12 | 56 |
neural rod | 8.70e-12 | 56 |
future spinal cord | 8.70e-12 | 56 |
neural keel | 8.70e-12 | 56 |
nervous system | 2.13e-11 | 89 |
pre-chordal neural plate | 6.84e-11 | 61 |
occipital lobe | 2.97e-09 | 5 |
neural plate | 2.69e-08 | 82 |
presumptive neural plate | 2.69e-08 | 82 |
neurectoderm | 6.09e-08 | 86 |
temporal lobe | 6.04e-07 | 6 |