FFCP PHASE1:Hg19::chr9:130588904..130588928,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C962 | |||
|description=CAGE_peak_at_chr9:130588904..130588928,- | |||
|id=chr9:130588904..130588928,- | |||
|ontology_enrichment_celltype=CL:0000055!2.89e-18!180;CL:0000048!2.76e-16!430;CL:0000723!5.63e-15!436;CL:0000057!6.82e-15!75;CL:0000115!2.15e-13!35;CL:0000034!2.49e-13!444;CL:0002139!3.66e-13!24;CL:0000222!3.56e-12!119;CL:0002078!2.77e-10!44;CL:0002371!4.91e-10!591;CL:0000071!5.28e-10!18;CL:0002546!5.28e-10!18;CL:0002320!4.26e-09!365;CL:0000680!2.19e-08!57;CL:0000056!2.19e-08!57;CL:0000355!2.19e-08!57;CL:0000134!2.28e-08!358;CL:0002057!2.93e-08!42;CL:0000860!2.97e-08!45;CL:0000183!4.43e-08!59;CL:0002334!1.45e-07!12;CL:0000187!1.68e-07!54;CL:0002194!1.94e-07!63;CL:0000576!1.94e-07!63;CL:0000040!1.94e-07!63;CL:0000559!1.94e-07!63;CL:0000192!2.54e-07!42;CL:0000514!2.54e-07!42;CL:0002009!2.75e-07!65;CL:1000413!6.93e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.80e-22;24!CL:0000115;5.86e-21;36!CL:0000071;4.91e-16;18!CL:0002078;1.09e-13;45!CL:0000860;1.20e-10;33!CL:0002057;1.20e-10;33!CL:0002334;1.18e-09;12!CL:1000413;1.32e-09;9!CL:0000473;3.83e-09;39!CL:0000234;3.83e-09;39!CL:0000213;4.03e-09;58!CL:0000215;4.03e-09;58!CL:0002138;1.87e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.39e-23,36;CL:0002139,1.10e-21,24;CL:0002078,4.08e-20,45;CL:0000071,4.88e-16,18;CL:0002546,4.88e-16,18;CL:0000213,2.63e-13,58;CL:0000215,2.63e-13,58;CL:0000048,2.10e-12,427;CL:0000723,8.52e-12,433;CL:0000222,1.75e-11,121;CL:0000034,5.12e-11,441;CL:0002334,5.59e-10,12;CL:0000057,9.47e-10,76;CL:1000413,1.02e-09,9;CL:0000473,1.38e-08,48;CL:0000234,1.38e-08,48;CL:0000134,3.84e-08,354;CL:0002320,6.37e-08,361;CL:0000860,9.52e-08,42;CL:0002057,9.52e-08,42;CL:0005020,3.16e-07,6;CL:0002138,3.16e-07,6;CL:0005022,3.16e-07,6;CL:0002194,9.18e-07,59;CL:0000576,9.18e-07,59;CL:0000040,9.18e-07,59;CL:0000559,9.18e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002546;4.91e-16;18!CL:0005022;1.87e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.79e-21!69;UBERON:0002049!1.46e-20!79;UBERON:0007798!1.46e-20!79;UBERON:0001981!2.08e-17!60;UBERON:0007500!2.08e-17!60;UBERON:0004537!2.08e-17!60;UBERON:0006965!2.08e-17!60;UBERON:0004872!9.34e-17!84;UBERON:0001009!2.08e-15!113;UBERON:0002204!9.95e-15!167;UBERON:0004535!1.34e-14!110;UBERON:0001637!3.51e-14!42;UBERON:0003509!3.51e-14!42;UBERON:0004572!3.51e-14!42;UBERON:0003081!1.08e-13!216;UBERON:0004573!1.28e-11!33;UBERON:0004571!1.28e-11!33;UBERON:0000926!1.62e-10!448;UBERON:0004120!1.62e-10!448;UBERON:0006603!1.62e-10!448;UBERON:0003914!3.55e-10!118;UBERON:0001986!5.28e-10!18;UBERON:0004638!5.28e-10!18;UBERON:0004852!5.28e-10!18;UBERON:0000914!1.03e-09!83;UBERON:0002329!1.03e-09!83;UBERON:0003077!1.03e-09!83;UBERON:0003059!1.03e-09!83;UBERON:0007282!1.03e-09!83;UBERON:0009618!1.03e-09!83;UBERON:0007285!1.03e-09!83;UBERON:0002384!4.77e-09!375;UBERON:0004290!4.99e-09!70;UBERON:0000468!7.56e-09!659;UBERON:0000947!1.89e-08!21;UBERON:0010191!1.89e-08!21;UBERON:0000467!1.92e-08!625;UBERON:0000480!2.73e-08!626;UBERON:0002405!1.24e-07!115;UBERON:0002385!1.49e-07!63;UBERON:0001015!1.49e-07!63;UBERON:0000383!1.49e-07!63;UBERON:0001134!2.00e-07!61;UBERON:0002036!2.00e-07!61;UBERON:0003082!2.00e-07!61;UBERON:0006914!3.73e-07!25;UBERON:0003915!6.93e-07!9;UBERON:0004700!6.93e-07!9;UBERON:0001917!6.93e-07!9;UBERON:0000486!8.55e-07!82;UBERON:0004765!8.56e-07!101;UBERON:0001434!8.56e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000055;3.79e-17;65!UBERON:0004638;4.91e-16;18!UBERON:0001986;4.91e-16;18!UBERON:0004852;4.91e-16;18!UBERON:0007500;1.83e-13;56!UBERON:0001981;1.83e-13;56!UBERON:0004537;1.83e-13;56!UBERON:0001637;1.86e-13;42!UBERON:0003509;1.86e-13;42!UBERON:0004572;1.86e-13;42!UBERON:0006914;2.03e-13;25!UBERON:0004573;2.70e-13;33!UBERON:0004571;2.70e-13;33!UBERON:0000487;3.61e-12;22!UBERON:0002049;1.76e-11;75!UBERON:0007798;1.76e-11;75!UBERON:0000947;2.72e-10;21!UBERON:0010191;2.72e-10;21!UBERON:0004457;4.22e-10;9!UBERON:0000042;4.22e-10;9!UBERON:0001473;7.32e-10;8!UBERON:0004536;7.32e-10;8!UBERON:0006558;7.32e-10;8!UBERON:0003915;1.32e-09;9!UBERON:0004700;1.32e-09;9!UBERON:0001917;1.32e-09;9!UBERON:0003688;2.31e-09;6!UBERON:0002358;2.31e-09;6!UBERON:0003684;2.31e-09;6!UBERON:0001178;2.31e-09;6!UBERON:0003914;7.61e-09;74!UBERON:0002465;1.68e-07;10!UBERON:0000490;5.87e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.54e-30,68;UBERON:0002049,1.13e-25,78;UBERON:0007798,1.13e-25,78;UBERON:0007500,8.18e-24,59;UBERON:0001981,8.18e-24,59;UBERON:0004537,8.18e-24,59;UBERON:0006965,8.18e-24,59;UBERON:0004872,1.38e-18,83;UBERON:0003081,3.49e-18,203;UBERON:0004535,5.73e-18,109;UBERON:0001009,6.62e-18,112;UBERON:0001637,3.40e-17,42;UBERON:0003509,3.40e-17,42;UBERON:0004572,3.40e-17,42;UBERON:0000926,8.73e-17,315;UBERON:0004120,8.73e-17,315;UBERON:0006603,8.73e-17,315;UBERON:0004638,4.88e-16,18;UBERON:0001986,4.88e-16,18;UBERON:0004852,4.88e-16,18;UBERON:0004573,6.91e-14,33;UBERON:0004571,6.91e-14,33;UBERON:0006914,1.79e-13,25;UBERON:0003914,2.15e-13,117;UBERON:0000487,3.58e-12,22;UBERON:0000947,2.08e-10,21;UBERON:0010191,2.08e-10,21;UBERON:0003915,1.02e-09,9;UBERON:0004700,1.02e-09,9;UBERON:0001917,1.02e-09,9;UBERON:0001473,1.03e-09,8;UBERON:0004536,1.03e-09,8;UBERON:0006558,1.03e-09,8;UBERON:0003688,3.32e-09,6;UBERON:0002358,3.32e-09,6;UBERON:0003684,3.32e-09,6;UBERON:0001178,3.32e-09,6;UBERON:0002405,5.25e-09,93;UBERON:0004457,1.94e-08,12;UBERON:0000042,1.94e-08,12;UBERON:0002384,7.87e-08,371;UBERON:0002465,2.18e-07,10;UBERON:0002204,5.92e-07,167 | |||
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| |||
|short_description=p@chr9:130588904..130588928,- | |||
}} |
Revision as of 03:25, 23 January 2014
Short description: | p@chr9:130588904..130588928, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:130588904..130588928, - |
Coexpression cluster: | C962_Renal_Endothelial_Preadipocyte_Adipocyte_Hepatic_chorionic_tenocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.39e-23 | 36 |
endothelial cell of vascular tree | 1.10e-21 | 24 |
meso-epithelial cell | 4.08e-20 | 45 |
blood vessel endothelial cell | 4.88e-16 | 18 |
embryonic blood vessel endothelial progenitor cell | 4.88e-16 | 18 |
lining cell | 2.63e-13 | 58 |
barrier cell | 2.63e-13 | 58 |
multi fate stem cell | 2.10e-12 | 427 |
somatic stem cell | 8.52e-12 | 433 |
mesodermal cell | 1.75e-11 | 121 |
stem cell | 5.12e-11 | 441 |
preadipocyte | 5.59e-10 | 12 |
fibroblast | 9.47e-10 | 76 |
endothelial cell of artery | 1.02e-09 | 9 |
defensive cell | 1.38e-08 | 48 |
phagocyte | 1.38e-08 | 48 |
mesenchymal cell | 3.84e-08 | 354 |
connective tissue cell | 6.37e-08 | 361 |
classical monocyte | 9.52e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.52e-08 | 42 |
lymphangioblast | 3.16e-07 | 6 |
endothelial cell of lymphatic vessel | 3.16e-07 | 6 |
vascular lymphangioblast | 3.16e-07 | 6 |
monopoietic cell | 9.18e-07 | 59 |
monocyte | 9.18e-07 | 59 |
monoblast | 9.18e-07 | 59 |
promonocyte | 9.18e-07 | 59 |