FFCP PHASE1:Mm9::chr5:31418955..31418960,+: Difference between revisions
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{{FFCP|EntrezGene=58522|HGNC=|MCL_coexpression_id=35|UniProt=Q9ERP3|association_with_transcript=-24bp_to_NM_021447,uc008wxd.2_5end|description=CAGE_peak_5_at_Trim54_5end|id=chr5:31418955..31418960,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!8.45e-10!18;UBERON:0000948!8.45e-10!18;UBERON:0005498!8.45e-10!18;UBERON:0004140!8.45e-10!18;UBERON:0009881!8.45e-10!18;UBERON:0004141!8.45e-10!18;UBERON:0003084!8.45e-10!18;UBERON:0007005!8.45e-10!18;UBERON:0004139!8.45e-10!18;UBERON:0004291!8.45e-10!18;UBERON:0003102!3.46e-08!23;UBERON:0000026!9.30e-08!13;UBERON:0004708!9.30e-08!13;UBERON:0002101!9.30e-08!13;UBERON:0004357!9.30e-08!13;UBERON:0009872!9.30e-08!13;UBERON:0004347!9.30e-08!13;UBERON:0005732!9.30e-08!13;UBERON:0005733!9.30e-08!13;UBERON:0005418!1.08e-07!5;UBERON:0002472!1.08e-07!5;UBERON:0008784!1.08e-07!5;UBERON:0006058!1.08e-07!5;UBERON:0004709!1.08e-07!5;UBERON:0005420!1.08e-07!5;UBERON:0006057!1.08e-07!5;UBERON:0000978!1.08e-07!5;UBERON:0002103!1.08e-07!5;UBERON:0000376!1.08e-07!5;UBERON:0000154!1.08e-07!5;UBERON:0005730!1.08e-07!5;UBERON:0004535!7.30e-07!23;UBERON:0001009!7.30e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.75e-11,5;UBERON:0002472,4.75e-11,5;UBERON:0008784,4.75e-11,5;UBERON:0006058,4.75e-11,5;UBERON:0004709,4.75e-11,5;UBERON:0002529,4.75e-11,5;UBERON:0010538,4.75e-11,5;UBERON:0005420,4.75e-11,5;UBERON:0010758,4.75e-11,5;UBERON:0000978,4.75e-11,5;UBERON:0002103,4.75e-11,5;UBERON:0000376,4.75e-11,5;UBERON:0000154,4.75e-11,5;UBERON:0010709,4.75e-11,5;UBERON:0005730,4.75e-11,5;UBERON:0001374,2.75e-07,1;UBERON:0004252,2.75e-07,1;UBERON:0003663,2.75e-07,1;UBERON:0005090,2.75e-07,1;UBERON:0001630,2.75e-07,1;UBERON:0003661,2.75e-07,1;UBERON:0010890,2.75e-07,1;UBERON:0001383,2.75e-07,1;UBERON:0001723,4.10e-07,1;UBERON:0001033,4.10e-07,1;UBERON:0010056,4.10e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0.884610551949874,2.75003644910596,0.883366073841574,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,1.54030738137126,1.75439984910399,1.3173006917463,2.81833479396781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,0,0,0,5.55436039849621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0.221985953374065,0.62799699626633,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,1.12369808963859,0.640251524048693,0.631790158511746,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,1.24233064311536,0.953744759789284,0.872078499793971,0.188218760830661,0.338458431566706,0.73171189149109,0.263069711437843,1.35804113845862,0,0.237270036248348,0.886540341380071,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.765153328275374,2.64709702943419,2.31867835620421|short_description=p5@Trim54}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:58522 | |||
|HGNC= | |||
|MCL_coexpression_id=35 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9ERP3 | |||
|association_with_transcript=-24bp_to_NM_021447,uc008wxd.2_5end | |||
|cluster_id=chr5:31418955..31418960,+ | |||
|description=CAGE_peak_5_at_Trim54_5end | |||
|id=chr5:31418955..31418960,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!8.45e-10!18;UBERON:0000948!8.45e-10!18;UBERON:0005498!8.45e-10!18;UBERON:0004140!8.45e-10!18;UBERON:0009881!8.45e-10!18;UBERON:0004141!8.45e-10!18;UBERON:0003084!8.45e-10!18;UBERON:0007005!8.45e-10!18;UBERON:0004139!8.45e-10!18;UBERON:0004291!8.45e-10!18;UBERON:0003102!3.46e-08!23;UBERON:0000026!9.30e-08!13;UBERON:0004708!9.30e-08!13;UBERON:0002101!9.30e-08!13;UBERON:0004357!9.30e-08!13;UBERON:0009872!9.30e-08!13;UBERON:0004347!9.30e-08!13;UBERON:0005732!9.30e-08!13;UBERON:0005733!9.30e-08!13;UBERON:0005418!1.08e-07!5;UBERON:0002472!1.08e-07!5;UBERON:0008784!1.08e-07!5;UBERON:0006058!1.08e-07!5;UBERON:0004709!1.08e-07!5;UBERON:0005420!1.08e-07!5;UBERON:0006057!1.08e-07!5;UBERON:0000978!1.08e-07!5;UBERON:0002103!1.08e-07!5;UBERON:0000376!1.08e-07!5;UBERON:0000154!1.08e-07!5;UBERON:0005730!1.08e-07!5;UBERON:0004535!7.30e-07!23;UBERON:0001009!7.30e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,4.75e-11,5;UBERON:0002472,4.75e-11,5;UBERON:0008784,4.75e-11,5;UBERON:0006058,4.75e-11,5;UBERON:0004709,4.75e-11,5;UBERON:0002529,4.75e-11,5;UBERON:0010538,4.75e-11,5;UBERON:0005420,4.75e-11,5;UBERON:0010758,4.75e-11,5;UBERON:0000978,4.75e-11,5;UBERON:0002103,4.75e-11,5;UBERON:0000376,4.75e-11,5;UBERON:0000154,4.75e-11,5;UBERON:0010709,4.75e-11,5;UBERON:0005730,4.75e-11,5;UBERON:0001374,2.75e-07,1;UBERON:0004252,2.75e-07,1;UBERON:0003663,2.75e-07,1;UBERON:0005090,2.75e-07,1;UBERON:0001630,2.75e-07,1;UBERON:0003661,2.75e-07,1;UBERON:0010890,2.75e-07,1;UBERON:0001383,2.75e-07,1;UBERON:0001723,4.10e-07,1;UBERON:0001033,4.10e-07,1;UBERON:0010056,4.10e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96622188184453,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0.884610551949874,2.75003644910596,0.883366073841574,1.93950101254089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.746441823660558,0,0.420883711772948,0,0,0,0,0.0680364991513279,0,0.281105173679186,0.258703370739016,0,0.189106080167819,0,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0.207125772535502,0.234526059981096,0.540186184383045,0.473489471170421,0.393528463494808,0,0.232533944750408,0.536546802799238,0.233530684734339,0.329119699826961,0.32833492815819,1.54030738137126,1.75439984910399,1.3173006917463,2.81833479396781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624075346229121,0,0,0,0,0.189491411770485,0,0,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0.345369963731791,0,0,0,0,0,0,0,0,5.55436039849621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15420377059036,0.161464426695906,0.241251699712623,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0.221985953374065,0.62799699626633,0.335769232728157,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.666740183404846,0.206035057238894,0.64183841918363,0.252697211763798,0.50695859978048,0.188626341386076,1.12369808963859,0.640251524048693,0.631790158511746,1.42888107384922,0.579421629724277,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,1.24233064311536,0.953744759789284,0.872078499793971,0.188218760830661,0.338458431566706,0.73171189149109,0.263069711437843,1.35804113845862,0,0.237270036248348,0.886540341380071,0.818462086339379,0.77468420592983,0.192906610981141,0.749431733813838,0.233931608445408,0.644613162144895,0.765153328275374,2.64709702943419,2.31867835620421 | |||
|short_description=p5@Trim54 | |||
}} |
Revision as of 07:00, 4 August 2015
Short description: | p5@Trim54 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Trim54_5end |
Coexpression cluster: | MCL_coexpression_mm9:35 |
Association with transcript: | -24bp_to_NM_021447, uc008wxd.2_5end |
EntrezGene: | 58522 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 4.75e-11 | 5 |
stylopod | 4.75e-11 | 5 |
lower limb segment | 4.75e-11 | 5 |
multi-limb segment region | 4.75e-11 | 5 |
pelvic appendage | 4.75e-11 | 5 |
limb segment | 4.75e-11 | 5 |
paired limb/fin segment | 4.75e-11 | 5 |
pelvic appendage bud | 4.75e-11 | 5 |
subdivision of organism along appendicular axis | 4.75e-11 | 5 |
leg | 4.75e-11 | 5 |
hindlimb | 4.75e-11 | 5 |
hindlimb stylopod | 4.75e-11 | 5 |
posterior region of body | 4.75e-11 | 5 |
pelvic complex | 4.75e-11 | 5 |
hindlimb/pelvic fin field | 4.75e-11 | 5 |
biceps femoris | 2.75e-07 | 1 |
hindlimb stylopod muscle | 2.75e-07 | 1 |
hindlimb muscle | 2.75e-07 | 1 |
muscle structure | 2.75e-07 | 1 |
muscle organ | 2.75e-07 | 1 |
limb muscle | 2.75e-07 | 1 |
pelvic complex muscle | 2.75e-07 | 1 |
muscle of leg | 2.75e-07 | 1 |
tongue | 4.10e-07 | 1 |
gustatory system | 4.10e-07 | 1 |
future tongue | 4.10e-07 | 1 |