FFCP PHASE1:Hg19::chr9:103189405..103189455,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=91283 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23370 | |||
|TSSclassifier=strong | |||
|UniProt=Q96H12 | |||
|association_with_transcript=0bp_to_ENST00000395067_5end | |||
|description=CAGE_peak_1_at_C9orf30_5end | |||
|id=chr9:103189405..103189455,+ | |||
|ontology_enrichment_celltype=CL:0000220!1.84e-27!246;CL:0002321!7.05e-27!248;CL:0000548!1.07e-23!679;CL:0000004!1.07e-23!679;CL:0000255!1.07e-23!679;CL:0000012!1.30e-23!682;CL:0000066!7.42e-20!254;CL:0000222!4.60e-19!119;CL:0000144!8.23e-17!625;CL:0000055!5.00e-16!180;CL:0000076!3.72e-14!62;CL:0000213!3.02e-13!57;CL:0000215!3.02e-13!57;CL:0002371!3.11e-13!591;CL:0000003!5.83e-12!722;CL:0002078!1.14e-10!44;CL:0000063!8.50e-10!578;CL:0002139!1.04e-09!24;CL:0000115!5.35e-09!35;CL:0000071!3.61e-08!18;CL:0002546!3.61e-08!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.37e-10;24!CL:0000071;3.58e-08;18!CL:0000115;5.14e-08;36!CL:0000213;6.20e-08;58!CL:0000215;6.20e-08;58!CL:0000076;1.85e-07;63!CL:0002078;5.62e-07;45!CL:0000077;9.92e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.07e-27,250;CL:0000066,5.96e-20,253;CL:0000222,2.42e-19,121;CL:0000076,1.24e-13,63;CL:0000213,1.24e-13,58;CL:0000215,1.24e-13,58;CL:0002078,4.76e-11,45;CL:0002139,1.03e-09,24;CL:0000115,2.25e-09,36;CL:0000071,3.58e-08,18;CL:0002546,3.58e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;3.58e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!2.26e-12!69;UBERON:0003914!3.24e-12!118;UBERON:0002049!4.12e-12!79;UBERON:0007798!4.12e-12!79;UBERON:0001981!6.28e-11!60;UBERON:0007500!6.28e-11!60;UBERON:0004537!6.28e-11!60;UBERON:0006965!6.28e-11!60;UBERON:0000490!5.86e-10!138;UBERON:0005256!1.52e-09!143;UBERON:0000487!4.21e-09!22;UBERON:0001637!6.06e-09!42;UBERON:0003509!6.06e-09!42;UBERON:0004572!6.06e-09!42;UBERON:0004872!1.91e-08!84;UBERON:0001986!3.61e-08!18;UBERON:0004638!3.61e-08!18;UBERON:0004852!3.61e-08!18;UBERON:0002100!3.84e-08!216;UBERON:0000486!9.71e-08!82;UBERON:0006914!1.01e-07!25;UBERON:0000914!1.57e-07!83;UBERON:0002329!1.57e-07!83;UBERON:0003077!1.57e-07!83;UBERON:0003059!1.57e-07!83;UBERON:0007282!1.57e-07!83;UBERON:0009618!1.57e-07!83;UBERON:0007285!1.57e-07!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;3.74e-09;22!UBERON:0000490;1.26e-08;33!UBERON:0004638;3.58e-08;18!UBERON:0001986;3.58e-08;18!UBERON:0004852;3.58e-08;18!UBERON:0003914;5.41e-08;74!UBERON:0006914;1.10e-07;25!UBERON:0000055;8.39e-07;65!UBERON:0001637;9.94e-07;42!UBERON:0003509;9.94e-07;42!UBERON:0004572;9.94e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,2.37e-12,117;UBERON:0000055,5.91e-12,68;UBERON:0002049,1.03e-11,78;UBERON:0007798,1.03e-11,78;UBERON:0000490,1.25e-11,148;UBERON:0007500,1.63e-10,59;UBERON:0001981,1.63e-10,59;UBERON:0004537,1.63e-10,59;UBERON:0006965,1.63e-10,59;UBERON:0000487,4.17e-09,22;UBERON:0001637,6.00e-09,42;UBERON:0003509,6.00e-09,42;UBERON:0004572,6.00e-09,42;UBERON:0004638,3.58e-08,18;UBERON:0001986,3.58e-08,18;UBERON:0004852,3.58e-08,18;UBERON:0004872,3.87e-08,83;UBERON:0006914,1.01e-07,25;UBERON:0000486,1.09e-07,83;UBERON:0002100,2.19e-07,199;UBERON:0007503,5.24e-07,78;UBERON:0003104,9.02e-07,160;UBERON:0009142,9.02e-07,160 | |||
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| |||
|short_description=p1@C9orf30 | |||
}} |
Revision as of 02:29, 23 January 2014
Short description: | p1@C9orf30 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_C9orf30_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000395067_5end |
EntrezGene: | C9orf30 |
HGNC: | 23370 |
UniProt: | Q96H12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.07e-27 | 250 |
epithelial cell | 5.96e-20 | 253 |
mesodermal cell | 2.42e-19 | 121 |
squamous epithelial cell | 1.24e-13 | 63 |
lining cell | 1.24e-13 | 58 |
barrier cell | 1.24e-13 | 58 |
meso-epithelial cell | 4.76e-11 | 45 |
endothelial cell of vascular tree | 1.03e-09 | 24 |
endothelial cell | 2.25e-09 | 36 |
blood vessel endothelial cell | 3.58e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.58e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 2.37e-12 | 117 |
vessel | 5.91e-12 | 68 |
vasculature | 1.03e-11 | 78 |
vascular system | 1.03e-11 | 78 |
unilaminar epithelium | 1.25e-11 | 148 |
epithelial tube open at both ends | 1.63e-10 | 59 |
blood vessel | 1.63e-10 | 59 |
blood vasculature | 1.63e-10 | 59 |
vascular cord | 1.63e-10 | 59 |
simple squamous epithelium | 4.17e-09 | 22 |
artery | 6.00e-09 | 42 |
arterial blood vessel | 6.00e-09 | 42 |
arterial system | 6.00e-09 | 42 |
blood vessel endothelium | 3.58e-08 | 18 |
endothelium | 3.58e-08 | 18 |
cardiovascular system endothelium | 3.58e-08 | 18 |
splanchnic layer of lateral plate mesoderm | 3.87e-08 | 83 |
squamous epithelium | 1.01e-07 | 25 |
multilaminar epithelium | 1.09e-07 | 83 |
trunk | 2.19e-07 | 199 |
epithelial vesicle | 5.24e-07 | 78 |
mesenchyme | 9.02e-07 | 160 |
entire embryonic mesenchyme | 9.02e-07 | 160 |