FFCP PHASE1:Mm9::chr4:57447339..57447354,+: Difference between revisions
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{{FFCP|EntrezGene=242481|HGNC=|MCL_coexpression_id=20|UniProt=Q3UZT2|association_with_transcript=0bp_to_ENSMUST00000030049,uc008syf.1_5end|description=CAGE_peak_2_at_Palm2_5end|id=chr4:57447339..57447354,+|ontology_enrichment_celltype=CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!3.37e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000540!2.87e-07!33;CL:0000047!2.87e-07!33;CL:0000031!2.87e-07!33;CL:0000404!2.87e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,6.49e-11,23;CL:0000337,6.49e-11,23;CL:0000221,1.10e-09,44;CL:0000133,1.10e-09,44;CL:0002319,5.03e-09,43;CL:0000540,1.03e-07,33;CL:0000047,1.03e-07,33;CL:0000031,1.03e-07,33;CL:0000404,1.03e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.58e-25!73;UBERON:0005743!1.58e-25!73;UBERON:0000073!2.32e-25!75;UBERON:0001016!2.32e-25!75;UBERON:0001049!3.05e-21!52;UBERON:0005068!3.05e-21!52;UBERON:0006241!3.05e-21!52;UBERON:0007135!3.05e-21!52;UBERON:0000955!7.43e-20!50;UBERON:0006238!7.43e-20!50;UBERON:0004121!1.14e-19!102;UBERON:0000924!1.14e-19!102;UBERON:0006601!1.14e-19!102;UBERON:0002616!3.79e-19!49;UBERON:0000033!4.29e-19!63;UBERON:0002346!5.51e-19!71;UBERON:0003075!5.51e-19!71;UBERON:0007284!5.51e-19!71;UBERON:0002020!4.48e-15!34;UBERON:0003080!2.13e-14!40;UBERON:0003056!3.30e-14!49;UBERON:0002780!1.16e-13!39;UBERON:0001890!1.16e-13!39;UBERON:0006240!1.16e-13!39;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0002619!6.71e-09!17;UBERON:0000153!2.65e-08!94;UBERON:0007811!5.88e-08!86;UBERON:0003076!9.50e-08!12;UBERON:0003057!9.50e-08!12;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002021!2.35e-07!10;UBERON:0000411!2.35e-07!10;UBERON:0001950!2.35e-07!10;UBERON:0000025!7.11e-07!114;UBERON:0004111!8.13e-07!122|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-31,73;UBERON:0001016,3.43e-30,75;UBERON:0000073,8.23e-29,54;UBERON:0001049,2.00e-26,52;UBERON:0005068,2.00e-26,52;UBERON:0006241,2.00e-26,52;UBERON:0007135,2.00e-26,52;UBERON:0004121,1.44e-23,95;UBERON:0000924,1.44e-23,95;UBERON:0006601,1.44e-23,95;UBERON:0002346,3.48e-21,64;UBERON:0003075,3.48e-21,64;UBERON:0007284,3.48e-21,64;UBERON:0000955,6.67e-21,47;UBERON:0006238,6.67e-21,47;UBERON:0002616,7.02e-20,46;UBERON:0010371,3.99e-19,73;UBERON:0002020,5.32e-19,34;UBERON:0003080,1.07e-15,40;UBERON:0002780,1.22e-14,39;UBERON:0001890,1.22e-14,39;UBERON:0006240,1.22e-14,39;UBERON:0003528,8.27e-14,29;UBERON:0002791,8.27e-14,29;UBERON:0001893,8.27e-14,29;UBERON:0003056,4.86e-13,49;UBERON:0010314,1.86e-12,92;UBERON:0003076,3.18e-12,12;UBERON:0003057,3.18e-12,12;UBERON:0002021,5.11e-11,10;UBERON:0000411,5.11e-11,10;UBERON:0001950,5.11e-11,10;UBERON:0002619,1.69e-09,17;UBERON:0004111,3.38e-09,122;UBERON:0000025,9.42e-09,114;UBERON:0000956,2.16e-08,21;UBERON:0001869,2.16e-08,21;UBERON:0000203,2.16e-08,21;UBERON:0002240,2.20e-08,6;UBERON:0005174,2.20e-08,6;UBERON:0001137,2.20e-08,6;UBERON:0001948,3.98e-07,5;UBERON:0002315,3.98e-07,5;UBERON:0002420,4.24e-07,8;UBERON:0007245,4.24e-07,8;UBERON:0010009,4.24e-07,8;UBERON:0010011,4.24e-07,8;UBERON:0000454,4.24e-07,8|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06155844543851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57852828398938,0.878744730937887,1.74986909166855,1.53985063787899,8.62515386189829,0,0,0,0,0,0,3.03474691289397,4.7609188134483,1.26766280701236,0.338844532069132,0.889294796111139,0,0.988866362566974,0,0.299600110518405,5.37905627450176,0.103689612308478,0,0,17.1390590642282,12.8103753751936,0.244981598429908,0.383381884072945,0.919218786610021,22.0231761998777,23.111408193419,22.4265538554115,2.76961204233407,2.19570344645783,0.52091337055676,20.9387249251036,7.31591393041184,13.5990440521361,15.3206864446307,14.6642831223076,6.71038004971082,0.075726193333184,0.377857800533928,0,0,0,0,0,0,0.140444420131752,0,0,0.35333957451034,3.38024207464033,0,0,0,0,0,0,0.11418387971906,0,0.593768556259299,0,0,0,0.150722640552623,0.23517741427141,0.251333182659351,0,0,0,0,0,0,0,3.51336956413857,3.97948742945565,0.510914110417183,0,0,0,32.5045687508465,17.8425235099264,2.1361239859187,10.081810571152,4.85859368927628,27.0124457927428,15.7374025175725,0.407357455401265,0,0.252722758433675,1.26265113531884,0.130120442962704,0,0,1.05493372485001,0.884474488967262,0.896796041993948,0.749613796477831,0.517406741478031,0.431135985865684,0.189106080167819,0.527853372491847,0.657587197282725,0.278047249225598,0.696504333044333,0.205782136407943,0.796137067273973,0,0,0,0,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0.116765342367169,0,0,0.0810688095458557,0.146199987425332,0.219550115291051,0,15.7717461423095,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.190225626112559,0.474529061544512,0.329397909448022,0,0.596869416123452,0.58489226135736,0,0.432276099749388,0.199141273254367,0,0,0,0,0.19395248716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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:242481 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UZT2 | |||
|association_with_transcript=0bp_to_ENSMUST00000030049,uc008syf.1_5end | |||
|cluster_id=chr4:57447339..57447354,+ | |||
|description=CAGE_peak_2_at_Palm2_5end | |||
|id=chr4:57447339..57447354,+ | |||
|ontology_enrichment_celltype=CL:0000221!1.11e-09!44;CL:0000133!1.11e-09!44;CL:0002319!3.37e-09!43;CL:0000117!3.94e-09!23;CL:0000337!3.94e-09!23;CL:0000540!2.87e-07!33;CL:0000047!2.87e-07!33;CL:0000031!2.87e-07!33;CL:0000404!2.87e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,6.49e-11,23;CL:0000337,6.49e-11,23;CL:0000221,1.10e-09,44;CL:0000133,1.10e-09,44;CL:0002319,5.03e-09,43;CL:0000540,1.03e-07,33;CL:0000047,1.03e-07,33;CL:0000031,1.03e-07,33;CL:0000404,1.03e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.58e-25!73;UBERON:0005743!1.58e-25!73;UBERON:0000073!2.32e-25!75;UBERON:0001016!2.32e-25!75;UBERON:0001049!3.05e-21!52;UBERON:0005068!3.05e-21!52;UBERON:0006241!3.05e-21!52;UBERON:0007135!3.05e-21!52;UBERON:0000955!7.43e-20!50;UBERON:0006238!7.43e-20!50;UBERON:0004121!1.14e-19!102;UBERON:0000924!1.14e-19!102;UBERON:0006601!1.14e-19!102;UBERON:0002616!3.79e-19!49;UBERON:0000033!4.29e-19!63;UBERON:0002346!5.51e-19!71;UBERON:0003075!5.51e-19!71;UBERON:0007284!5.51e-19!71;UBERON:0002020!4.48e-15!34;UBERON:0003080!2.13e-14!40;UBERON:0003056!3.30e-14!49;UBERON:0002780!1.16e-13!39;UBERON:0001890!1.16e-13!39;UBERON:0006240!1.16e-13!39;UBERON:0002791!1.15e-11!29;UBERON:0003528!1.15e-11!29;UBERON:0001893!1.15e-11!29;UBERON:0002619!6.71e-09!17;UBERON:0000153!2.65e-08!94;UBERON:0007811!5.88e-08!86;UBERON:0003076!9.50e-08!12;UBERON:0003057!9.50e-08!12;UBERON:0000956!1.52e-07!21;UBERON:0001869!1.52e-07!21;UBERON:0000203!1.52e-07!21;UBERON:0002021!2.35e-07!10;UBERON:0000411!2.35e-07!10;UBERON:0001950!2.35e-07!10;UBERON:0000025!7.11e-07!114;UBERON:0004111!8.13e-07!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.80e-31,73;UBERON:0001016,3.43e-30,75;UBERON:0000073,8.23e-29,54;UBERON:0001049,2.00e-26,52;UBERON:0005068,2.00e-26,52;UBERON:0006241,2.00e-26,52;UBERON:0007135,2.00e-26,52;UBERON:0004121,1.44e-23,95;UBERON:0000924,1.44e-23,95;UBERON:0006601,1.44e-23,95;UBERON:0002346,3.48e-21,64;UBERON:0003075,3.48e-21,64;UBERON:0007284,3.48e-21,64;UBERON:0000955,6.67e-21,47;UBERON:0006238,6.67e-21,47;UBERON:0002616,7.02e-20,46;UBERON:0010371,3.99e-19,73;UBERON:0002020,5.32e-19,34;UBERON:0003080,1.07e-15,40;UBERON:0002780,1.22e-14,39;UBERON:0001890,1.22e-14,39;UBERON:0006240,1.22e-14,39;UBERON:0003528,8.27e-14,29;UBERON:0002791,8.27e-14,29;UBERON:0001893,8.27e-14,29;UBERON:0003056,4.86e-13,49;UBERON:0010314,1.86e-12,92;UBERON:0003076,3.18e-12,12;UBERON:0003057,3.18e-12,12;UBERON:0002021,5.11e-11,10;UBERON:0000411,5.11e-11,10;UBERON:0001950,5.11e-11,10;UBERON:0002619,1.69e-09,17;UBERON:0004111,3.38e-09,122;UBERON:0000025,9.42e-09,114;UBERON:0000956,2.16e-08,21;UBERON:0001869,2.16e-08,21;UBERON:0000203,2.16e-08,21;UBERON:0002240,2.20e-08,6;UBERON:0005174,2.20e-08,6;UBERON:0001137,2.20e-08,6;UBERON:0001948,3.98e-07,5;UBERON:0002315,3.98e-07,5;UBERON:0002420,4.24e-07,8;UBERON:0007245,4.24e-07,8;UBERON:0010009,4.24e-07,8;UBERON:0010011,4.24e-07,8;UBERON:0000454,4.24e-07,8 | |||
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|short_description=p2@Palm2 | |||
}} |
Revision as of 15:03, 5 August 2015
Short description: | p2@Palm2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Palm2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000030049, uc008syf.1_5end |
EntrezGene: | 242481 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 6.49e-11 | 23 |
neuroblast (sensu Vertebrata) | 6.49e-11 | 23 |
ectodermal cell | 1.10e-09 | 44 |
neurectodermal cell | 1.10e-09 | 44 |
neural cell | 5.03e-09 | 43 |
neuron | 1.03e-07 | 33 |
neuronal stem cell | 1.03e-07 | 33 |
neuroblast | 1.03e-07 | 33 |
electrically signaling cell | 1.03e-07 | 33 |