FFCP PHASE1:Hg19::chr8:36807702..36807719,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C420 | |||
|description=CAGE_peak_at_chr8:36807702..36807719,- | |||
|id=chr8:36807702..36807719,- | |||
|ontology_enrichment_celltype=CL:0002077!7.51e-15!33;CL:0002159!1.62e-14!13;CL:0002621!4.83e-13!3;CL:0000064!1.36e-12!3;CL:0005012!1.36e-12!3;CL:0000067!1.36e-12!3;CL:0002304!1.36e-12!3;CL:0000221!9.94e-12!71;CL:0000240!1.03e-10!6;CL:0000311!1.03e-10!6;CL:0000079!1.03e-10!6;CL:0000237!1.03e-10!6;CL:0000036!1.03e-10!6;CL:0000357!1.03e-10!6;CL:0000114!1.03e-10!6;CL:0000362!2.62e-08!8;CL:0000312!7.61e-08!5;CL:0000066!7.59e-07!254;CL:0002573!9.43e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002573;2.81e-34;2!CL:0000312;1.48e-20;5!CL:0000240;2.58e-17;6!CL:0000311;2.58e-17;6!CL:0000079;2.58e-17;6!CL:0000237;2.58e-17;6!CL:0002159;1.65e-16;14!CL:0000362;6.88e-12;9!CL:0002166;1.30e-09;3!CL:0000632;1.67e-09;3!CL:0000306;1.59e-07;4!CL:0002222;1.59e-07;4!CL:0002224;1.59e-07;4!CL:0000243;7.21e-07;15!CL:0000125;7.21e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002573,2.81e-34,2;CL:0000312,1.48e-20,5;CL:0000240,2.58e-17,6;CL:0000311,2.58e-17,6;CL:0000079,2.58e-17,6;CL:0000237,2.58e-17,6;CL:0000036,2.58e-17,6;CL:0000357,2.58e-17,6;CL:0000114,2.58e-17,6;CL:0002159,1.74e-16,14;CL:0000362,6.88e-12,9;CL:0002166,1.41e-09,3;CL:0000632,1.67e-09,3;CL:0000221,1.28e-08,72;CL:0000306,1.49e-07,4;CL:0002222,1.49e-07,4;CL:0002224,1.49e-07,4;CL:0002077,3.51e-07,34;CL:0000243,7.21e-07,15;CL:0000125,7.21e-07,15;CL:0000030,7.21e-07,15;CL:0000339,7.21e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000357;2.58e-17;6!CL:0000114;2.58e-17;6!CL:0000339;7.21e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000488!2.80e-16!4;UBERON:0001801!4.53e-13!14;UBERON:0001949!4.83e-13!3;UBERON:0001778!1.36e-12!3;UBERON:0001775!1.36e-12!3;UBERON:0007625!1.51e-12!11;UBERON:0000988!1.38e-11!3;UBERON:0001444!3.86e-11!48;UBERON:0002203!7.04e-11!6;UBERON:0001768!7.04e-11!6;UBERON:0001456!7.25e-11!21;UBERON:0001708!7.53e-10!4;UBERON:0001704!7.53e-10!4;UBERON:0000019!2.30e-09!19;UBERON:0000047!2.30e-09!19;UBERON:0004088!2.30e-09!19;UBERON:0003072!2.30e-09!19;UBERON:0003071!2.30e-09!19;UBERON:0004128!2.30e-09!19;UBERON:0000153!4.14e-09!129;UBERON:0007811!4.14e-09!129;UBERON:0000970!7.57e-09!20;UBERON:0002148!2.12e-08!2;UBERON:0009662!2.12e-08!2;UBERON:0002104!2.23e-08!21;UBERON:0004121!2.28e-08!169;UBERON:0000924!4.74e-08!173;UBERON:0006601!4.74e-08!173;UBERON:0000033!8.41e-08!123;UBERON:0000020!1.45e-07!23;UBERON:0005085!1.48e-07!29;UBERON:0000475!1.73e-07!365;UBERON:0001032!3.30e-07!24;UBERON:0004456!3.30e-07!24;UBERON:0001003!4.43e-07!14;UBERON:0007376!4.43e-07!14;UBERON:0007383!4.43e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000010;3.74e-12;8!UBERON:0010371;4.54e-08;31!UBERON:0010077;1.59e-07;4!UBERON:0005389;1.59e-07;4!UBERON:0001708;1.59e-07;4!UBERON:0000484;1.59e-07;4!UBERON:0000965;1.59e-07;4!UBERON:0001803;1.59e-07;4!UBERON:0008895;1.59e-07;4!UBERON:0001003;1.65e-07;15!UBERON:0007376;1.65e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.74e-12,8;UBERON:0010077,1.49e-07,4;UBERON:0005389,1.49e-07,4;UBERON:0000484,1.49e-07,4;UBERON:0002546,1.49e-07,4;UBERON:0000965,1.49e-07,4;UBERON:0001803,1.49e-07,4;UBERON:0003073,1.49e-07,4;UBERON:0005426,1.49e-07,4;UBERON:0001003,1.65e-07,15;UBERON:0007376,1.65e-07,15;UBERON:0007383,1.65e-07,15;UBERON:0001708,1.69e-07,4;UBERON:0008895,1.69e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.351339142772504,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0.773043412653187,0.545492241181669,0.573609190778008,0,0,0,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0,0,0,0,0.514703430895577,1.75600456653801,1.1240175325762,0.100528972411631,0.0925884451585296,0,0,0,2.89826012437692,0.117408694235822,0,0,0,0,0,0,0,0,0,2.01578553838631,0.567100388969546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,2.13648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242721043499027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.407712618220842,0.209205692624666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670869375198532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0.733714394086716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8332000730565,14.8271324280934,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0,0,0,0,0,0,0,0,0,0.193766729508018,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:36807702..36807719,- | |||
}} |
Revision as of 21:38, 22 January 2014
Short description: | p@chr8:36807702..36807719, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:36807702..36807719, - |
Coexpression cluster: | C420_schwannoma_salivary_Mammary_skin_squamous_Smooth_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 2.81e-34 | 2 |
keratinocyte | 1.48e-20 | 5 |
stratified squamous epithelial cell | 2.58e-17 | 6 |
keratin accumulating cell | 2.58e-17 | 6 |
stratified epithelial cell | 2.58e-17 | 6 |
keratinizing barrier epithelial cell | 2.58e-17 | 6 |
epithelial fate stem cell | 2.58e-17 | 6 |
stratified epithelial stem cell | 2.58e-17 | 6 |
surface ectodermal cell | 2.58e-17 | 6 |
general ecto-epithelial cell | 1.74e-16 | 14 |
epidermal cell | 6.88e-12 | 9 |
epithelial cell of Malassez | 1.41e-09 | 3 |
hepatic stellate cell | 1.67e-09 | 3 |
ectodermal cell | 1.28e-08 | 72 |
crystallin accumulating cell | 1.49e-07 | 4 |
vertebrate lens cell | 1.49e-07 | 4 |
lens epithelial cell | 1.49e-07 | 4 |
ecto-epithelial cell | 3.51e-07 | 34 |
glial cell (sensu Vertebrata) | 7.21e-07 | 15 |
glial cell | 7.21e-07 | 15 |
glioblast | 7.21e-07 | 15 |
glioblast (sensu Vertebrata) | 7.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 3.74e-12 | 8 |
cuboidal epithelium | 1.49e-07 | 4 |
transparent eye structure | 1.49e-07 | 4 |
simple cuboidal epithelium | 1.49e-07 | 4 |
cranial placode | 1.49e-07 | 4 |
lens of camera-type eye | 1.49e-07 | 4 |
epithelium of lens | 1.49e-07 | 4 |
lens placode | 1.49e-07 | 4 |
lens vesicle | 1.49e-07 | 4 |
skin epidermis | 1.65e-07 | 15 |
outer epithelium | 1.65e-07 | 15 |
enveloping layer of ectoderm | 1.65e-07 | 15 |
jaw skeleton | 1.69e-07 | 4 |
splanchnocranium | 1.69e-07 | 4 |