FFCP PHASE1:Hg19::chr8:22423219..22423330,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10174 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30907 | |||
|TSSclassifier=strong | |||
|UniProt=E5RHI2 | |||
|association_with_transcript=0bp_to_ENST00000521554,ENST00000523965_5end | |||
|coexpression_cluster_id=C1220 | |||
|description=CAGE_peak_1_at_SORBS3_5end | |||
|id=chr8:22423219..22423330,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.26e-25!180;CL:0002321!5.52e-23!248;CL:0000220!9.23e-23!246;CL:0000222!3.40e-20!119;CL:0000183!5.43e-16!59;CL:0000187!7.35e-14!54;CL:0000680!1.16e-13!57;CL:0000056!1.16e-13!57;CL:0000355!1.16e-13!57;CL:0000393!1.47e-12!60;CL:0000211!1.47e-12!60;CL:0000192!6.60e-12!42;CL:0000514!6.60e-12!42;CL:0000057!9.63e-10!75;CL:0000359!1.13e-09!32;CL:0002078!2.66e-08!44;CL:0000115!1.23e-07!35;CL:0000071!2.52e-07!18;CL:0002546!2.52e-07!18;CL:0000213!4.92e-07!57;CL:0000215!4.92e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.84e-09;32!CL:0000192;4.84e-09;43!CL:0000187;6.59e-08;55!CL:0000071;2.51e-07;18!CL:0000393;5.23e-07;61!CL:0000211;5.23e-07;61!CL:0000115;9.23e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.50e-23,250;CL:0000222,1.12e-20,121;CL:0000187,5.59e-14,55;CL:0000680,8.71e-14,58;CL:0000056,8.71e-14,58;CL:0000355,8.71e-14,58;CL:0000393,1.10e-12,61;CL:0000211,1.10e-12,61;CL:0000192,5.13e-12,43;CL:0000514,5.13e-12,43;CL:0000057,5.95e-10,76;CL:0000359,1.12e-09,32;CL:0002078,1.34e-08,45;CL:0000115,6.14e-08,36;CL:0000071,2.51e-07,18;CL:0002546,2.51e-07,18;CL:0000213,2.67e-07,58;CL:0000215,2.67e-07,58;CL:0000221,8.12e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000514;4.84e-09;43!CL:0000355;7.51e-08;58!CL:0002546;2.51e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!8.13e-21!84;UBERON:0002049!2.02e-19!79;UBERON:0007798!2.02e-19!79;UBERON:0001981!1.09e-17!60;UBERON:0007500!1.09e-17!60;UBERON:0004537!1.09e-17!60;UBERON:0006965!1.09e-17!60;UBERON:0000055!2.99e-17!69;UBERON:0003914!4.37e-17!118;UBERON:0000119!4.73e-17!312;UBERON:0000483!2.39e-16!309;UBERON:0000914!3.45e-16!83;UBERON:0002329!3.45e-16!83;UBERON:0003077!3.45e-16!83;UBERON:0003059!3.45e-16!83;UBERON:0007282!3.45e-16!83;UBERON:0009618!3.45e-16!83;UBERON:0007285!3.45e-16!83;UBERON:0005256!5.00e-16!143;UBERON:0002100!3.59e-15!216;UBERON:0000475!4.15e-15!365;UBERON:0004290!8.66e-15!70;UBERON:0001009!1.90e-14!113;UBERON:0000481!2.07e-14!347;UBERON:0000486!2.13e-14!82;UBERON:0004535!3.49e-14!110;UBERON:0001637!4.23e-13!42;UBERON:0003509!4.23e-13!42;UBERON:0004572!4.23e-13!42;UBERON:0001134!5.66e-13!61;UBERON:0002036!5.66e-13!61;UBERON:0003082!5.66e-13!61;UBERON:0002385!9.32e-13!63;UBERON:0001015!9.32e-13!63;UBERON:0000383!9.32e-13!63;UBERON:0000490!1.77e-12!138;UBERON:0000468!2.31e-12!659;UBERON:0003104!5.17e-12!238;UBERON:0009142!5.17e-12!238;UBERON:0000477!2.48e-10!286;UBERON:0003103!4.46e-10!69;UBERON:0004111!6.47e-10!241;UBERON:0004573!2.02e-09!33;UBERON:0004571!2.02e-09!33;UBERON:0000922!5.94e-09!612;UBERON:0000467!6.43e-09!625;UBERON:0000480!1.23e-08!626;UBERON:0000025!1.89e-08!194;UBERON:0002050!4.16e-08!605;UBERON:0005423!4.16e-08!605;UBERON:0000923!6.38e-08!604;UBERON:0005291!6.38e-08!604;UBERON:0006598!6.38e-08!604;UBERON:0002532!6.38e-08!604;UBERON:0006914!1.08e-07!25;UBERON:0001986!2.52e-07!18;UBERON:0004638!2.52e-07!18;UBERON:0004852!2.52e-07!18;UBERON:0000487!2.58e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0007500;5.55e-10;56!UBERON:0001981;5.55e-10;56!UBERON:0004537;5.55e-10;56!UBERON:0003914;8.25e-10;74!UBERON:0001637;1.95e-09;42!UBERON:0003509;1.95e-09;42!UBERON:0004572;1.95e-09;42!UBERON:0004573;1.34e-08;33!UBERON:0004571;1.34e-08;33!UBERON:0000055;1.73e-08;65!UBERON:0002049;4.08e-08;75!UBERON:0007798;4.08e-08;75!UBERON:0000490;7.70e-08;33!UBERON:0006914;1.13e-07;25!UBERON:0004638;2.51e-07;18!UBERON:0001986;2.51e-07;18!UBERON:0004852;2.51e-07;18!UBERON:0000487;2.64e-07;22!UBERON:0000025;4.67e-07;93 | |||
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| |||
|short_description=p1@SORBS3 | |||
}} |
Revision as of 21:05, 22 January 2014
Short description: | p1@SORBS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SORBS3_5end |
Coexpression cluster: | C1220_Mesenchymal_Fibroblast_Renal_Alveolar_Trabecular_Smooth_Hepatic |
Association with transcript: | 0bp_to_ENST00000521554, ENST00000523965_5end |
EntrezGene: | SORBS3 |
HGNC: | 30907 |
UniProt: | E5RHI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.50e-23 | 250 |
mesodermal cell | 1.12e-20 | 121 |
muscle cell | 5.59e-14 | 55 |
muscle precursor cell | 8.71e-14 | 58 |
myoblast | 8.71e-14 | 58 |
multi-potent skeletal muscle stem cell | 8.71e-14 | 58 |
electrically responsive cell | 1.10e-12 | 61 |
electrically active cell | 1.10e-12 | 61 |
smooth muscle cell | 5.13e-12 | 43 |
smooth muscle myoblast | 5.13e-12 | 43 |
fibroblast | 5.95e-10 | 76 |
vascular associated smooth muscle cell | 1.12e-09 | 32 |
meso-epithelial cell | 1.34e-08 | 45 |
endothelial cell | 6.14e-08 | 36 |
blood vessel endothelial cell | 2.51e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.51e-07 | 18 |
lining cell | 2.67e-07 | 58 |
barrier cell | 2.67e-07 | 58 |
ectodermal cell | 8.12e-07 | 72 |