FFCP PHASE1:Hg19::chr8:134115035..134115072,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6503 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10902 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=47bp_to_ENST00000518565_5end | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_12_at_SLA_5end | |||
|id=chr8:134115035..134115072,- | |||
|ontology_enrichment_celltype=CL:0000047!4.16e-11!8;CL:0000540!9.26e-09!6;CL:0000031!9.26e-09!6;CL:0000404!9.26e-09!6;CL:0002319!1.01e-08!25 | |||
|ontology_enrichment_celltype_v019=CL:0000540;6.35e-34;6!CL:0000404;6.35e-34;6!CL:0002319;1.42e-13;25!CL:0000047;2.32e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.63e-44,8;CL:0000540,6.72e-34,6;CL:0000031,6.72e-34,6;CL:0000404,6.72e-34,6;CL:0002319,1.44e-13,25 | |||
|ontology_enrichment_development_v019=CL:0000031;6.35e-34;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.86e-48!82;UBERON:0005743!2.28e-45!86;UBERON:0001893!2.81e-42!34;UBERON:0000073!1.44e-40!94;UBERON:0001016!1.44e-40!94;UBERON:0001869!4.04e-40!32;UBERON:0002619!4.11e-40!22;UBERON:0002791!6.66e-39!33;UBERON:0000955!2.52e-38!69;UBERON:0006238!2.52e-38!69;UBERON:0002020!1.13e-37!34;UBERON:0003528!1.13e-37!34;UBERON:0001049!2.06e-36!57;UBERON:0005068!2.06e-36!57;UBERON:0006241!2.06e-36!57;UBERON:0007135!2.06e-36!57;UBERON:0000956!3.91e-35!25;UBERON:0000203!3.91e-35!25;UBERON:0002616!4.92e-35!59;UBERON:0002780!1.49e-34!41;UBERON:0001890!1.49e-34!41;UBERON:0006240!1.49e-34!41;UBERON:0003080!1.18e-33!42;UBERON:0001950!2.85e-32!20;UBERON:0002346!1.39e-28!90;UBERON:0003075!1.58e-27!86;UBERON:0007284!1.58e-27!86;UBERON:0003056!8.14e-25!61;UBERON:0000924!1.30e-24!173;UBERON:0006601!1.30e-24!173;UBERON:0004121!1.55e-23!169;UBERON:0000033!3.04e-21!123;UBERON:0000153!5.22e-20!129;UBERON:0007811!5.22e-20!129;UBERON:0000349!2.46e-16!5;UBERON:0001872!4.13e-16!5;UBERON:0007023!8.69e-16!115;UBERON:0001954!3.50e-11!2;UBERON:0003022!3.50e-11!2;UBERON:0002421!3.50e-11!2;UBERON:0002600!3.50e-11!2;UBERON:0001871!1.40e-10!7;UBERON:0000025!2.46e-09!194;UBERON:0000200!7.70e-08!6;UBERON:0000988!2.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;1.02e-10;49!UBERON:0001950;5.19e-10;20!UBERON:0002619;3.39e-09;22!UBERON:0002114;9.31e-09;2!UBERON:0000956;3.32e-08;25!UBERON:0000203;3.32e-08;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.29e-17,81;UBERON:0001016,4.18e-15,89;UBERON:0001950,5.19e-10,20;UBERON:0002619,3.39e-09,22;UBERON:0002114,8.96e-09,2;UBERON:0000956,3.32e-08,25;UBERON:0000203,3.32e-08,25;UBERON:0004121,7.27e-08,171;UBERON:0000924,7.27e-08,171;UBERON:0006601,7.27e-08,171;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.4111883086097,15.4657762555539,13.2337849614136,12.1208362814101,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.98455192004777,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0.110579259931225,0,0.658156191461918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,9.79432837217568,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0.91124334987037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0.691743174681154,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,5.5455773168778,0,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,6.56369770821863,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.407948941145488,13.9632220908921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p12@SLA | |||
}} |
Revision as of 00:02, 23 January 2014
Short description: | p12@SLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_SLA_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | 47bp_to_ENST00000518565_5end |
EntrezGene: | SLA |
HGNC: | 10902 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.63e-44 | 8 |
neuron | 6.72e-34 | 6 |
neuroblast | 6.72e-34 | 6 |
electrically signaling cell | 6.72e-34 | 6 |
neural cell | 1.44e-13 | 25 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.29e-17 | 81 |
nervous system | 4.18e-15 | 89 |
neocortex | 5.19e-10 | 20 |
regional part of cerebral cortex | 3.39e-09 | 22 |
duodenum | 8.96e-09 | 2 |
cerebral cortex | 3.32e-08 | 25 |
pallium | 3.32e-08 | 25 |
ectoderm-derived structure | 7.27e-08 | 171 |
ectoderm | 7.27e-08 | 171 |
presumptive ectoderm | 7.27e-08 | 171 |
organ system subdivision | 1.33e-07 | 223 |