FFCP PHASE1:Hg19::chr8:129057554..129057590,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C370 | |||
|description=CAGE_peak_at_chr8:129057554..129057590,+ | |||
|id=chr8:129057554..129057590,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.16e-14!112;CL:0000049!1.16e-14!112;CL:0002274!1.53e-14!5;CL:0000457!1.53e-14!5;CL:0002191!1.53e-14!5;CL:0000097!1.53e-14!5;CL:0000831!1.53e-14!5;CL:0002028!1.53e-14!5;CL:0000764!2.93e-10!2;CL:0000765!2.93e-10!2;CL:0000050!2.93e-10!2;CL:0000038!2.93e-10!2;CL:0000558!2.93e-10!2;CL:0000547!2.93e-10!2;CL:0000549!2.93e-10!2;CL:0000550!2.93e-10!2;CL:0000552!2.93e-10!2;CL:0000037!8.64e-09!172;CL:0000566!8.64e-09!172;CL:0002032!2.24e-08!165;CL:0000837!2.24e-08!165;CL:0000163!4.04e-08!9;CL:0000988!4.96e-08!182 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.18e-18;2!CL:0000558;1.18e-18;2!CL:0000037;3.78e-10;1!CL:0001024;3.78e-10;1!CL:0000097;4.95e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,7.13e-19,108;CL:0000049,7.13e-19,108;CL:0000764,1.13e-18,2;CL:0000765,1.13e-18,2;CL:0000050,1.13e-18,2;CL:0000038,1.13e-18,2;CL:0000558,1.13e-18,2;CL:0000547,1.13e-18,2;CL:0000549,1.13e-18,2;CL:0000550,1.13e-18,2;CL:0000552,1.13e-18,2;CL:0000037,7.48e-13,168;CL:0000988,4.64e-12,177;CL:0002032,7.93e-12,161;CL:0000837,7.93e-12,161;CL:0001024,3.96e-10,1;CL:0000097,4.86e-08,5;CL:0002028,4.86e-08,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.46e-35!31;DOID:1036!1.84e-28!8;DOID:1240!3.49e-27!39;DOID:2531!6.82e-20!51;DOID:0060083!6.82e-20!51;DOID:0050686!9.00e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.47e-41;8!DOID:8692;2.38e-40;31!DOID:1240;1.10e-24;39!DOID:2531;7.58e-17;51!DOID:0060083;7.58e-17;51!DOID:8552;7.40e-11;1!DOID:9119;2.08e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.47e-41,8;DOID:8692,5.39e-41,31;DOID:1240,3.29e-32,39;DOID:2531,3.46e-24,51;DOID:0060083,3.46e-24,51;DOID:8552,7.40e-11,1;DOID:9119,2.08e-10,1;DOID:0050686,1.06e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.34880351467878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93027971474155,5.04457706683382,41.087917224912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3459279958148,1.67292024625129,0,0.288239906833923,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,2.87578996127391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0.166849141711909,0,70.7151681693916,25.8483537790196,84.9230830414587,15.3213105278997,496.27425790923,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.627921025580099,113.023943692106,40.1560275898582,48.4274459764817,55.7167668759798,54.6490750245653,83.2827673857184,0.210998064528027,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,39.240224918184,0,0,0,3.97520666736664,0,0,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158013611732727,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,1.28915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr8:129057554..129057590,+ | |||
}} |
Revision as of 23:49, 22 January 2014
Short description: | p@chr8:129057554..129057590, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:129057554..129057590, + |
Coexpression cluster: | C370_acute_chronic_leukemia_CD34_testicular_Mast_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 7.13e-19 | 108 |
common myeloid progenitor | 7.13e-19 | 108 |
erythroid lineage cell | 1.13e-18 | 2 |
erythroblast | 1.13e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.13e-18 | 2 |
erythroid progenitor cell | 1.13e-18 | 2 |
reticulocyte | 1.13e-18 | 2 |
proerythroblast | 1.13e-18 | 2 |
basophilic erythroblast | 1.13e-18 | 2 |
polychromatophilic erythroblast | 1.13e-18 | 2 |
orthochromatic erythroblast | 1.13e-18 | 2 |
hematopoietic stem cell | 7.48e-13 | 168 |
hematopoietic cell | 4.64e-12 | 177 |
hematopoietic oligopotent progenitor cell | 7.93e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.93e-12 | 161 |
CD34-positive, CD38-negative hematopoietic stem cell | 3.96e-10 | 1 |
mast cell | 4.86e-08 | 5 |
basophil mast progenitor cell | 4.86e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.47e-41 | 8 |
myeloid leukemia | 5.39e-41 | 31 |
leukemia | 3.29e-32 | 39 |
hematologic cancer | 3.46e-24 | 51 |
immune system cancer | 3.46e-24 | 51 |
chronic myeloid leukemia | 7.40e-11 | 1 |
acute myeloid leukemia | 2.08e-10 | 1 |
organ system cancer | 1.06e-07 | 137 |