FFCP PHASE1:Mm9::chr4:114078640..114078658,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=52|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:114078640..114078658,+|id=chr4:114078640..114078658,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,1.08e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002048!4.03e-07!14;UBERON:0000117!4.03e-07!14;UBERON:0000171!4.03e-07!14;UBERON:0000170!4.03e-07!14;UBERON:0005597!4.03e-07!14;UBERON:0000118!4.03e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.33e-10,43;UBERON:0002113,1.54e-09,14;UBERON:0003918,1.54e-09,14;UBERON:0011143,1.54e-09,14;UBERON:0005095,1.54e-09,14;UBERON:0007687,1.54e-09,14;UBERON:0001008,2.39e-08,19;UBERON:0007100,2.01e-07,18;UBERON:0000948,2.01e-07,18;UBERON:0005498,2.01e-07,18;UBERON:0004140,2.01e-07,18;UBERON:0009881,2.01e-07,18;UBERON:0004141,2.01e-07,18;UBERON:0003084,2.01e-07,18;UBERON:0007005,2.01e-07,18;UBERON:0004139,2.01e-07,18;UBERON:0004291,2.01e-07,18;UBERON:0006554,4.12e-07,18;UBERON:0004535,6.37e-07,23;UBERON:0001009,6.37e-07,23|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,0.782391344348039,0,0.659058548203415,1.36100929351998,0.839918529752175,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.226714680320357,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,2.56652954828636,7.64415719119937,21.3320010945999,0,0,0,0.45673551887624,0.776813650941515,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,1.44599356919912,0,0.970601099684455,0.220841518460394,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0,0.457500602818626,0,1.39059456153821,0.511430914660661,0,0.162241263067758,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,1.23165786914764,0.43839146485515,1.39023624612799,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,1.3884040159864,0.465067889500816,1.60964040839772,0.934122738937356,1.81015834904829,1.14917224855367,4.45878452502207,3.80119967305864,4.83010253640311,5.2340503316545,0.420579897128254,0,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0.444756087689741,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0.456994050438915,2.25415471346161,1.62921062276251,1.55161989734101,1.05203729835478,1.45444035385792,2.65698266363284,2.66897837330337,1.60416313098341,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0.744281895337007,0,0,0,0,1.84753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,1.00503754465089,0.952174563544055,1.17080188714679,0.788175720530955,0.664394068946325,1.75400245523236,1.63863314715738,1.03610989119537,0.723245292907558,0,0,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.504941854408746,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,1.05418608574999,0,0,0.720244376125241,0,0,0,0.713475270408282,0.329098041204242,0,0.469343416127421,0.21183207086382,0.441056796109924,2.4732937941222,0.807322133479528,0.72375509913787,0.716234064018819,0.328281799490123,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.523511883968059,0.388844919875379,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.386379188064381,2.43987218086537,2.01466786693992,1.2862102744744,0,1.6942555278512,0,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,1.03017528619447,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.287177344778066,0,0.695305955669133,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.376437521661322,1.26921911837515,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,0.492522411877817,0,0.619747364743864,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.765153328275374,0.661774257358546,0.231867835620421|short_description=p@chr4:114078640..114078658,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:114078640..114078658,+ | |||
|description=CAGE_peak_at_chr4:114078640..114078658,+ | |||
|id=chr4:114078640..114078658,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,1.08e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!4.03e-07!14;UBERON:0000117!4.03e-07!14;UBERON:0000171!4.03e-07!14;UBERON:0000170!4.03e-07!14;UBERON:0005597!4.03e-07!14;UBERON:0000118!4.03e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003103,1.33e-10,43;UBERON:0002113,1.54e-09,14;UBERON:0003918,1.54e-09,14;UBERON:0011143,1.54e-09,14;UBERON:0005095,1.54e-09,14;UBERON:0007687,1.54e-09,14;UBERON:0001008,2.39e-08,19;UBERON:0007100,2.01e-07,18;UBERON:0000948,2.01e-07,18;UBERON:0005498,2.01e-07,18;UBERON:0004140,2.01e-07,18;UBERON:0009881,2.01e-07,18;UBERON:0004141,2.01e-07,18;UBERON:0003084,2.01e-07,18;UBERON:0007005,2.01e-07,18;UBERON:0004139,2.01e-07,18;UBERON:0004291,2.01e-07,18;UBERON:0006554,4.12e-07,18;UBERON:0004535,6.37e-07,23;UBERON:0001009,6.37e-07,23 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.367093504323363,0.782391344348039,0,0.659058548203415,1.36100929351998,0.839918529752175,0,0,0,0,0,0.85960031981627,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.30559649555362,0,0,0,0.151452386666368,0.226714680320357,0.869593466105033,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,2.56652954828636,7.64415719119937,21.3320010945999,0,0,0,0.45673551887624,0.776813650941515,0.445326417194474,0,0.304465478312141,0,0.150722640552623,0.470354828542819,0.125666591329675,0.494389935468748,1.44599356919912,0,0.970601099684455,0.220841518460394,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,0,0,0,0,0.457500602818626,0,1.39059456153821,0.511430914660661,0,0.162241263067758,0.203678727700633,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.30140963567143,0.204109497453984,0.12811372028485,0.187403449119458,0.517406741478031,0,0.189106080167819,1.23165786914764,0.43839146485515,1.39023624612799,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0.23674473558521,0.196764231747404,1.3884040159864,0.465067889500816,1.60964040839772,0.934122738937356,1.81015834904829,1.14917224855367,4.45878452502207,3.80119967305864,4.83010253640311,5.2340503316545,0.420579897128254,0,0,0,0.426576501070468,0,0.128867461322093,0.403367049246685,0.444756087689741,0,0.474529061544512,0,0,0,0,0,0,0.398282546508734,0.189667900953082,0.456994050438915,2.25415471346161,1.62921062276251,1.55161989734101,1.05203729835478,1.45444035385792,2.65698266363284,2.66897837330337,1.60416313098341,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0.287696137450811,0.324270453550071,0,1.43768206527355,0.744281895337007,0,0,0,0,1.84753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,1.00503754465089,0.952174563544055,1.17080188714679,0.788175720530955,0.664394068946325,1.75400245523236,1.63863314715738,1.03610989119537,0.723245292907558,0,0,0,0.275936746304732,0.160550589987792,0,0.655739781506702,0.504941854408746,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0.567760340833074,0.35613120733451,0.325773918707152,0.329940245945071,0,0,0,0,0,0.614870295887855,0.258428293168221,0,0,0,1.05418608574999,0,0,0.720244376125241,0,0,0,0.713475270408282,0.329098041204242,0,0.469343416127421,0.21183207086382,0.441056796109924,2.4732937941222,0.807322133479528,0.72375509913787,0.716234064018819,0.328281799490123,0,0,0.341741761595705,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.523511883968059,0.388844919875379,0,0,0.299033092087958,0,0,0,0.168956125490778,0.234714477291508,0.39061315453185,0,0.241584120826006,0,0,0,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.100966449948148,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.386379188064381,2.43987218086537,2.01466786693992,1.2862102744744,0,1.6942555278512,0,0,0.515559547031063,0,0.755393897389701,0.675022500231806,0.45032120322422,0,0,0.207574695168353,0,0,0.486213434136588,0.209613162627982,0.183843508450014,0.222246727801615,1.03017528619447,0.962757628775446,0.505394423527595,0.25347929989024,0.188626341386076,0.561849044819294,0.320125762024346,0.287177344778066,0,0.695305955669133,0.192909220463705,0,0.441596760403192,0.342869252385415,0.532427418478012,0.476872379894642,0.436039249896986,0.376437521661322,1.26921911837515,0.548783918618318,0.263069711437843,0.814824683075171,0.561142271657738,0.830445126869219,0.492522411877817,0,0.619747364743864,0.964533054905707,0.499621155875892,0.233931608445408,1.07435527024149,0.765153328275374,0.661774257358546,0.231867835620421 | |||
|short_description=p@chr4:114078640..114078658,+ | |||
}} |
Latest revision as of 13:44, 4 August 2015
Short description: | p@chr4:114078640..114078658, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:114078640..114078658, + |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 1.08e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
compound organ | 1.33e-10 | 43 |
kidney | 1.54e-09 | 14 |
kidney mesenchyme | 1.54e-09 | 14 |
upper urinary tract | 1.54e-09 | 14 |
kidney rudiment | 1.54e-09 | 14 |
kidney field | 1.54e-09 | 14 |
renal system | 2.39e-08 | 19 |
primary circulatory organ | 2.01e-07 | 18 |
heart | 2.01e-07 | 18 |
primitive heart tube | 2.01e-07 | 18 |
primary heart field | 2.01e-07 | 18 |
anterior lateral plate mesoderm | 2.01e-07 | 18 |
heart tube | 2.01e-07 | 18 |
heart primordium | 2.01e-07 | 18 |
cardiac mesoderm | 2.01e-07 | 18 |
cardiogenic plate | 2.01e-07 | 18 |
heart rudiment | 2.01e-07 | 18 |
urinary system structure | 4.12e-07 | 18 |
cardiovascular system | 6.37e-07 | 23 |
circulatory system | 6.37e-07 | 23 |