FFCP PHASE1:Hg19::chr8:101734308..101734321,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=26986 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8554 | |||
|TSSclassifier=strong | |||
|UniProt=E7EQV3,E5RJM8,E5RH24,P11940 | |||
|association_with_transcript=0bp_to_ENST00000347137,ENST00000519004,ENST00000519363,ENST00000520142,NM_002568,uc003yjs.1,uc003yjt.1,uc011lhd.1_5end | |||
|description=CAGE_peak_1_at_PABPC1_5end | |||
|id=chr8:101734308..101734321,- | |||
|ontology_enrichment_celltype=CL:0000988!7.52e-16!182;CL:0000037!1.61e-14!172;CL:0000566!1.61e-14!172;CL:0002032!1.72e-14!165;CL:0000837!1.72e-14!165;CL:0000763!1.46e-12!112;CL:0000049!1.46e-12!112;CL:0000860!2.91e-12!45;CL:0002057!6.98e-12!42;CL:0002087!1.43e-11!119;CL:0000738!2.28e-10!140;CL:0002031!1.41e-09!124;CL:0000063!1.76e-09!578;CL:0002194!2.88e-09!63;CL:0000576!2.88e-09!63;CL:0000040!2.88e-09!63;CL:0000559!2.88e-09!63;CL:0002009!8.55e-09!65;CL:0000839!1.10e-08!70;CL:0000766!2.28e-08!76;CL:0000548!2.80e-08!679;CL:0000004!2.80e-08!679;CL:0000255!2.80e-08!679;CL:0000557!3.03e-08!71;CL:0000012!4.24e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.00e-12;33!CL:0002057;1.00e-12;33!CL:0000576;3.33e-08;48!CL:0000473;1.68e-07;39!CL:0000234;1.68e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.40e-15,177;CL:0000037,5.46e-14,168;CL:0002032,5.80e-14,161;CL:0000837,5.80e-14,161;CL:0000763,4.59e-12,108;CL:0000049,4.59e-12,108;CL:0000860,6.98e-12,42;CL:0002057,6.98e-12,42;CL:0002087,4.43e-11,115;CL:0000738,6.80e-10,136;CL:0002031,4.11e-09,120;CL:0002194,8.28e-09,59;CL:0000576,8.28e-09,59;CL:0000040,8.28e-09,59;CL:0000559,8.28e-09,59;CL:0000473,1.85e-08,48;CL:0000234,1.85e-08,48;CL:0002009,2.46e-08,61;CL:0000839,3.17e-08,66;CL:0000766,6.59e-08,72;CL:0000557,8.72e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;5.73e-09;42 | |||
|ontology_enrichment_disease=DOID:162!2.82e-14!235;DOID:14566!1.60e-13!239;DOID:2531!1.05e-11!51;DOID:0060083!1.05e-11!51;DOID:1240!1.47e-09!39;DOID:0050686!3.26e-09!137;DOID:8692!5.37e-08!31;DOID:0050687!1.53e-07!143;DOID:1749!8.01e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.26e-08;31!DOID:1240;1.08e-07;39!DOID:2531;5.76e-07;51!DOID:0060083;5.76e-07;51!DOID:1749;7.96e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.82e-14,235;DOID:14566,1.60e-13,239;DOID:2531,1.05e-11,51;DOID:0060083,1.05e-11,51;DOID:1240,1.47e-09,39;DOID:0050686,3.26e-09,137;DOID:8692,5.37e-08,31;DOID:0050687,1.53e-07,143;DOID:1749,8.01e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002193!8.43e-11!112;UBERON:0002390!9.82e-11!102;UBERON:0003061!9.82e-11!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.57e-10,108;UBERON:0002390,2.98e-10,98;UBERON:0003061,2.98e-10,98;UBERON:0002405,5.87e-07,93 | |||
|phase1_expression=563.384654117996,445.329089693245,682.642179036788,456.334240490275,675.805174774059,543.46690051453,587.65571735048,866.087946468185,1046.57081219675,576.246081096038,490.554221084617,1161.67121698826,1109.40391042888,781.460752589734,738.021955746068,553.995920676263,521.33076674074,522.171714626972,497.691454766317,1123.84901812492,851.294884562268,962.619449659208,561.881242738264,500.960395766756,418.182532490288,1591.76765513557,1706.29655053822,1734.8643309348,582.572494013227,603.763643206916,1815.83831037426,335.588746934808,548.797184013972,1090.77432999202,3108.13902168286,2567.29200025786,534.940000468092,895.256580187514,1860.4508391805,1179.02006059922,762.208274312702,795.158950076595,995.787144473765,1326.61353062475,1778.28419099954,1338.33626557318,1552.16110845616,1960.44849008807,1368.90215935636,1574.25277078681,1703.21253771199,919.679392036708,1744.75789020803,2079.75165050709,1535.73635797984,1547.54027337975,1839.93326369,910.130112002593,1910.57565617917,1730.77024302137,1857.91368757201,1389.99337898682,1764.45551532096,1438.93475779838,1773.46865725928,2047.69327591032,1916.42406015938,1689.89852251686,1870.03774545484,1228.20291680743,1531.05534215979,1420.81511964002,1192.11381348981,663.130343733185,1171.87490140732,491.230206426125,1077.45622995718,1223.04061530123,1122.9896742525,457.160440960963,951.418467043248,565.710884209071,292.153765805796,391.035245663686,418.069349315871,458.734989258995,416.011430530417,319.562356614693,425.712898073451,267.135051269902,1214.70047607956,1461.0461271549,1589.10980931658,557.763006603489,531.362117706496,854.9447391799,2066.04271550559,1428.59412259321,1531.73116754634,1087.21377952558,806.331687651503,751.361667701022,966.34057290324,773.634212610645,583.614302707652,653.96805681085,644.242391896972,558.734336643395,448.3145710389,478.514302396698,350.411822552456,856.078315261345,1466.40582310962,1398.16836759684,1057.89950090637,784.327270152553,489.755790823255,626.089205669352,690.490739521223,454.274280826162,399.765240667841,342.162736001415,730.439902646276,757.552751423002,520.961129723282,546.245120465547,257.013063036288,1525.55822598155,1056.38877334485,1257.51029891434,1923.63617521716,726.369031059038,1184.13518523293,1956.10869270527,1003.67849709305,1060.13167227427,808.010522203917,432.618399699043,730.565067043916,674.722556478582,748.088869748355,462.618094657921,1039.33445749862,901.376980408948,635.46379677587,836.51925798568,1056.35099632238,984.489297132452,534.243246668639,602.504067156554,750.526850216678,697.650256631067,891.109667626695,764.861645423185,979.53118355013,642.675745971998,908.710114502052,577.56145674345,611.562205558455,944.581569221899,846.344395246318,719.977684115431,798.815114355159,1115.48978576937,504.718433530336,866.475263540426,560.42531407492,634.227858082071,429.286584904473,692.014665825166,503.438392320759,355.807127077371,395.535869431292,1276.01119656906,866.719083756635,794.479830183573,322.416355280188,507.127145483903,744.094265852153,688.512092974753,603.131825872833,543.161941614586,1241.10960917427,692.547565110266,710.241969027978,1559.58693445337,895.377386641918,1060.7731219116,878.730616277352,794.096775589873,714.364693037609,793.152603839988,727.780757879119,834.839595038165,777.827392481143,487.283736775784,1137.41019918283,462.133111482719,556.350590876753,1989.61273719653,845.094934775896,630.587082871932,801.008764220315,1158.68213095485,804.207001453695,449.617596437162,570.153433550535,466.773433703487,591.268239230489,993.468972783976,933.983888410189,439.033273571481,1011.35752194604,331.325734498679,932.817683933928,397.637038760423,587.350267111705,408.942714275465,956.490496792132,1117.45919078845,468.967671714448,505.070268415161,592.275148940533,563.35538697101,823.966030304911,813.091027927826,958.225435354101,1018.49126955061,925.600948898584,793.836359307707,738.543130512964,593.088208498224,449.010157786572,486.933390212014,342.574604954152,1182.74511269745,942.774603060479,481.863596562284,462.427804884233,493.590589201371,448.565587102646,490.010869763821,491.861993417303,421.347838000514,485.648126185232,461.696588335668,1200.24076921968,806.390199369814,871.302181988574,671.829811031927,294.071680786648,356.766279653978,513.39642890614,618.93126537934,460.714690782503,1121.19564030086,1150.1829910824,1043.08827023071,642.380133710321,1254.38825500776,743.820361023471,779.951088959684,640.831158592213,1015.20255636675,1305.81949729081,787.085873193374,550.48977445359,650.288692337857,816.281143091931,778.646949020049,504.006211460902,442.03405684802,535.369446563999,321.507050574645,589.785252106196,605.663215419475,1033.50535199087,732.10689111667,663.252034955815,592.181211950924,1021.71402828947,930.073926315903,1070.23477407436,929.775522185288,502.64933121681,661.221964641379,642.351610711057,658.628917187415,335.731763676351,316.561582967489,666.261414461878,1484.16703239519,1380.685537995,993.000390015663,762.315307823616,1423.47265449049,296.701266147156,655.537457381706,598.042762240355,690.344592519589,617.04372430126,614.103122632109,1526.57603828804,1331.5934196306,1019.17153693459,393.489310626832,925.440634525589,424.486203892318,454.872019982915,267.56077179029,593.639621639055,558.253153143064,480.157779409113,463.83466686267,817.360382081788,1168.14588743294,423.631607970934,503.54938458984,628.346594359072,739.342717217529,4028.45216027136,1404.43525871934,1063.90645435686,1008.77626515882,691.645567133545,730.084580141258,238.17295433553,291.143269151098,433.798351124151,920.529632431087,978.257971597162,1042.25501629163,1199.55471453803,806.775050469259,799.96055489052,1125.3303317432,1138.0200905483,1121.10646847624,1084.14379575756,1126.74219738058,327.466805840618,706.721076927809,748.582249549437,462.397874702592,648.586182004238,1167.1706996354,809.132193345998,1852.43474603495,1481.52513122226,1603.36810088114,258.264690872213,818.862362391646,586.939559352909,856.964368206055,234.950281104024,487.225923935816,751.664249533942,513.242370813904,536.447827013931,491.26379993292,388.762638076495,435.203788742474,814.12649756489,354.13152070323,414.871051102054,656.3876707321,479.210464024851,1686.18706939413,623.786896878308,600.900854422166,750.818400057663,990.383150331769,812.357775777367,745.132280718012,600.632213324901,1023.95635188979,724.481656531611,787.023574314438,662.861862433568,818.946711785436,823.677170133313,708.887650456908,872.951235179256,568.455990107247,768.114283451794,600.333542256569,539.34133546437,738.576360335201,1587.91889983228,1427.76039578696,699.030223018148,452.17001727298,449.181717567681,1525.82353445583,1429.48248103431,743.966595178459,1397.18189147604,584.306404715846,679.407264337849,615.440296143429,894.918059997588,656.05552326797,534.967540290865,1075.15086247,941.132308065409,1142.56995048556,425.588396169438,1491.97610983851,1349.44662961002,677.161358032707,386.158647668972,1501.35566977826,786.216006778241,420.17763517226,928.659661929743,231.146692088316,513.950708085701,503.99242357693,512.223331073317,725.470238367632,1226.04520071718,799.326558789953,417.59267658599,498.606452420948,537.543504223195,485.151472859537,824.904524819129,323.361055192937,442.742637507169,702.6802180281,407.732668153139,610.657848254046,1103.60178373356,843.483401603897,511.9267682897,443.297736211084,504.877060158568,539.294588862128,989.706163596036,754.278964853628,684.619611872163,464.735247149625,550.433207348,1046.32922568076,977.283210957516,643.434576872175,222.435187172265,780.88714296606,1093.25904462687,818.523635812647,692.870746085066,1208.83840217061,561.043004623454,629.389892498445,711.632990071674,1113.71739910047,921.538971901912,1097.48963000327,1076.48385336981,1317.33399356671,1270.06240106349,1162.64990902247,943.636062588302,871.676656669646,1324.18250145553,1391.12098232538,902.57645062288,1812.16354260645,468.727689513256,1440.83646996847,1966.35500235548,1303.76087766813,1077.30093382503,695.576827915852,2121.52871833084,390.479449699896,1831.82318489248,1189.0901672257,1056.92057841906,1932.00655801597,623.742665072406,844.638187793526,1390.22407930677,2447.20167650528,2250.47033459456,1626.30678173936,820.290763276766,1263.988504365,1395.96258935657,1500.80802969862,1439.03332263603,652.584071610448,1027.7797812134,1313.87368603633,736.755193211178,1108.1578599905,1576.65905293925,760.230942241858,1353.41253855057,1118.00003107166,2499.82981960282,786.424332725951,482.567606353038,1760.9523051349,253.507650180406,352.236218691924,1100.06393174138,1541.08102789443,938.452439128931,706.533366338293,636.834425299295,1031.16073696755,510.627531733259,1882.21284511067,396.264434681143,2296.94518697453,1202.30620912139,2242.73327107461,1170.30536447658,1412.95024484694,634.592213725877,193.866549219044,255.483342337738,560.914772383356,1680.01948676084,1465.04245993627,704.699587322619,1931.18861085321,1474.41691804775,330.942754475111,536.075945390478,1304.93064489006,778.187227291016,448.185141221803,355.156511751826,431.806313777346,376.080063026095,276.337023721567,119.565041448915,1073.04386566205,752.748795360179,880.618758317454,457.249470114016,947.617647034927,1133.4595336066,1423.60651429407,657.142389047754,400.281483166138,1647.07745789758,753.164607702578,2928.46668304919,2262.63962570683,1239.64815509141,1412.434497225,1472.97006888697,734.157191909872,3042.99974115833,789.976753592933,1209.22864284297,609.797150166021,1275.61103127963,551.375109817492,790.899084224356,1039.3622765321,1392.4632202842,2004.57778152912,2058.36546865154,419.10024487385,348.318698927674,232.156065713811,1526.78167615669,1708.15212327714,1285.76489001256,574.120306145863,970.345542710284,656.220000935771,939.83718539413,454.578020309425,560.227298119326,813.536340193595,888.713401525714,924.846377627686,930.690227931349,809.99876800079,811.662861145901,761.927251291225,1919.76905774507,2507.47926792875,475.256537618322,952.974605925227,1132.82312673261,1202.17308743358,914.355614287485,1388.5917490647,1460.19761611087,665.965243080229,1468.95239028852,901.766907908167,265.14561346322,630.848760702474,1195.80928051238,573.54819686464,585.242346466059,1591.33456704995,912.283988461518,1012.92527237918,867.642048282626,2409.50516968487,798.060001212469,262.023309309928,264.540598323891,897.07432411145,2267.10632836732,304.413086375863,419.067364788391,140.52124687367,458.989491436514,1790.52576999641,275.651730055715,324.949481248567,353.911401116369,2082.05293820298,176.841131832267,219.154371207919,558.294656364695,916.963203615417,2505.82787433553,911.521419294578,805.202936383996,910.48707038233,841.456539469587,1376.61903272552,282.306539882303,371.562891872378,653.783054807233,872.687725209448,884.472479664135,676.496491895362,613.624949964454,250.531171657694,918.420174646791,397.574793324455,664.442267906021,2691.43577687011,519.574709386584,2028.73555086386,425.243719192153,296.617202723713,1215.4036099897,681.464500200909,428.653859635829,501.964772488162,466.947747093701,1726.65198892085,1068.16250857281,755.451714164678,674.433379386535,653.258962337251,264.254362803009,283.63893073807,1191.79091270224,1279.94408052708,891.568107527683,1536.98649095943,911.740160819177,1526.20668309356,1481.49440433889,1896.18896419217,1823.10263219164,273.640955094845,308.599259541944,370.371802307025,294.101749746695,2023.48497608802,209.112090472209,272.85072832079,339.142231283908,318.81551280368,447.709652002736,341.281830565843,3860.48030926058,1465.27030294774,873.498917039891,1423.04468772166,767.672369675134,391.059646348746,302.305265682181,521.496281286738,748.116304820966,711.815920307853,795.492622155374,614.077248178036,275.841478694926,777.827392481143,652.107743267087,516.51781753658,375.108515523701,500.988332729844,542.912356381471,456.16256730245,342.132621468706,542.582939412867,386.091345740683,581.346689210238,338.535833618059,436.979167461807,446.620307001486,562.723908345597,479.346873954484,343.158656058207,406.028181133101,565.916122141243,529.033446851259,461.836727516863,1105.44520670751,642.895890942027,836.747700040468,796.644622250125,1049.49137610994,1710.4648277957,1465.84216425197,892.43618229521,1314.16930912519,2306.14673288564,1135.10620118606,671.377259155311,684.677337666994,548.197952327412,437.55833689543,322.280414669684,1092.58175166245,919.158965287846,1003.80082454812,636.218326459733,462.298841365746,2050.57284507212,1365.51393889746,1948.83113459318,703.842621873754,703.15226646931,974.656900633245,904.181137898489,1542.12952762174,1199.64920282825,512.275678945635,501.521088578454,899.450580149427,846.116661820816,1050.33268022242,1046.76146493153,1158.07091495853,930.798734362556,922.130384299655,309.820879586477,647.160356672405,354.632262775006,299.950481200466,293.311912993961,336.508174892475,241.627077075609,825.282733429905,246.683919539865,255.777422680852,158.474056487661,2092.50935844187,1800.21797828652,1090.29958961286,3804.60676332909,626.610782852556,1339.2982565566,5492.67364129669,911.173127951252,1547.88469723081,685.387787851422,1820.25152664589,1112.33886372858,1085.1158167469,203.895967962933,204.642461836828,340.826527430453,243.516711144602,839.606331842967,2611.90000130762,417.313601025396,1702.43364540113,1513.60148024629,260.351092236847,408.92100621809,322.298735849651,336.257056625867,464.179503061089,1405.96988216806,488.054874858893,255.838074924795,205.079507968963,651.366257111549,1258.69454381065,921.979868622138,385.875888833701,2546.55287586909,428.271439918953,257.817543915034,520.749339796885,476.534120025768,1239.93281126671,642.233875158892,2363.77707022587,712.721403245195,1861.2155865124,1243.34266867524,1047.25838764835,2316.34409988837,723.363520465946,809.612558616757,715.947501872861,676.094369073492,447.938020899278,255.128896706975,596.413162345829,870.003670765514,829.285725729397,106.178329298815,352.133427516927,575.267957943747,610.538718275338,451.03528555494,1228.12313507113,612.557387595256,1896.02587918802,1650.20715634889,817.765723600671,970.310689891188,1146.78201396426,433.632547245324,881.798513348798,579.528629322898,605.219004115376,786.281821665797,373.205007456142,678.858823177829,1281.28275381934,975.312302928196,1346.60713493249,1021.14997488576,1281.00838432796,1170.4808158949,518.538835655027,1419.76713213705,400.777474491458,970.926193736858,203.838487592362,925.49981421194,757.037408777538,622.347665392975,683.095579117236,869.579389868816,1704.88689879642,1149.80161377397,578.632054119233,2324.22344099002,1231.87223827423,3129.48080365914,1738.40607745333,645.255615328309,687.327993850598,283.575948294903,381.357455742808,546.518695612214,610.873331135958,1100.85337924489,1125.84909318397,1624.45429320535,596.373873066405,398.979331003525,601.333657691407,676.937469546686,1502.55695070243,1103.44612996633,637.709903498708,1115.30618323896,2250.025905794,486.542151363089,1786.71309510212,1262.36827013058,983.187935562795,941.150860444303,713.025505152684,795.635306065327,1362.09552379644 | |||
|short_description=p1@PABPC1 | |||
}} |
Revision as of 23:06, 22 January 2014
Short description: | p1@PABPC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PABPC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000347137, ENST00000519004, ENST00000519363, ENST00000520142, NM_002568, uc003yjs.1, uc003yjt.1, uc011lhd.1_5end |
EntrezGene: | PABPC1 |
HGNC: | 8554 |
UniProt: | E7EQV3E5RJM8E5RH24P11940 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.40e-15 | 177 |
hematopoietic stem cell | 5.46e-14 | 168 |
hematopoietic oligopotent progenitor cell | 5.80e-14 | 161 |
hematopoietic multipotent progenitor cell | 5.80e-14 | 161 |
myeloid cell | 4.59e-12 | 108 |
common myeloid progenitor | 4.59e-12 | 108 |
classical monocyte | 6.98e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.98e-12 | 42 |
nongranular leukocyte | 4.43e-11 | 115 |
leukocyte | 6.80e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.11e-09 | 120 |
monopoietic cell | 8.28e-09 | 59 |
monocyte | 8.28e-09 | 59 |
monoblast | 8.28e-09 | 59 |
promonocyte | 8.28e-09 | 59 |
defensive cell | 1.85e-08 | 48 |
phagocyte | 1.85e-08 | 48 |
macrophage dendritic cell progenitor | 2.46e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.17e-08 | 66 |
myeloid leukocyte | 6.59e-08 | 72 |
granulocyte monocyte progenitor cell | 8.72e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.57e-10 | 108 |
hematopoietic system | 2.98e-10 | 98 |
blood island | 2.98e-10 | 98 |
immune system | 5.87e-07 | 93 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.82e-14 | 235 |
disease of cellular proliferation | 1.60e-13 | 239 |
hematologic cancer | 1.05e-11 | 51 |
immune system cancer | 1.05e-11 | 51 |
leukemia | 1.47e-09 | 39 |
organ system cancer | 3.26e-09 | 137 |
myeloid leukemia | 5.37e-08 | 31 |
cell type cancer | 1.53e-07 | 143 |
squamous cell carcinoma | 8.01e-07 | 14 |