FFCP PHASE1:Hg19::chr7:93551321..93551336,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |||
|TSSclassifier=weak | |||
|UniProt=P61952,Q53Y01 | |||
|association_with_transcript=305bp_to_NM_004126,uc003und.2_5end | |||
|coexpression_cluster_id=C2004 | |||
|description=CAGE_peak_6_at_GNG11_5end | |||
|id=chr7:93551321..93551336,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.68e-24!180;CL:0000222!1.22e-22!119;CL:0000183!4.76e-17!59;CL:0000680!7.62e-17!57;CL:0000056!7.62e-17!57;CL:0000355!7.62e-17!57;CL:0000187!7.15e-16!54;CL:0000192!1.96e-15!42;CL:0000514!1.96e-15!42;CL:0002139!3.21e-14!24;CL:0000393!1.23e-13!60;CL:0000211!1.23e-13!60;CL:0000359!1.42e-13!32;CL:0000115!1.47e-13!35;CL:0000057!1.13e-12!75;CL:0002078!3.17e-11!44;CL:0000071!3.30e-11!18;CL:0002546!3.30e-11!18;CL:0000213!2.15e-07!57;CL:0000215!2.15e-07!57;CL:0000220!4.48e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.60e-15;24!CL:0000359;1.50e-13;32!CL:0000115;1.23e-12;36!CL:0000071;7.53e-12;18!CL:0000192;1.86e-11;43!CL:0000187;3.56e-09;55!CL:0002078;6.80e-08;45!CL:0002494;8.28e-07;16!CL:0000393;9.75e-07;61!CL:0000211;9.75e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.65e-23,121;CL:0000680,4.99e-17,58;CL:0000056,4.99e-17,58;CL:0000355,4.99e-17,58;CL:0000187,5.33e-16,55;CL:0000192,8.66e-16,43;CL:0000514,8.66e-16,43;CL:0002139,4.77e-15,24;CL:0000115,8.27e-15,36;CL:0000359,4.95e-14,32;CL:0000393,3.04e-13,61;CL:0000211,3.04e-13,61;CL:0000057,5.40e-13,76;CL:0002078,4.25e-12,45;CL:0000071,7.74e-12,18;CL:0002546,7.74e-12,18;CL:0000213,1.58e-07,58;CL:0000215,1.58e-07,58;CL:0002494,7.93e-07,16 | |||
|ontology_enrichment_development_v019=CL:0002546;7.53e-12;18!CL:0000514;1.86e-11;43!CL:0000355;4.36e-09;58!CL:0000222;6.51e-07;121 | |||
|ontology_enrichment_disease=DOID:2394!4.58e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.12e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.99e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004535!4.80e-36!110;UBERON:0001009!2.05e-35!113;UBERON:0002049!1.49e-28!79;UBERON:0007798!1.49e-28!79;UBERON:0000055!1.22e-25!69;UBERON:0004872!1.38e-23!84;UBERON:0001981!5.50e-23!60;UBERON:0007500!5.50e-23!60;UBERON:0004537!5.50e-23!60;UBERON:0006965!5.50e-23!60;UBERON:0003914!3.97e-22!118;UBERON:0000914!1.16e-19!83;UBERON:0002329!1.16e-19!83;UBERON:0003077!1.16e-19!83;UBERON:0003059!1.16e-19!83;UBERON:0007282!1.16e-19!83;UBERON:0009618!1.16e-19!83;UBERON:0007285!1.16e-19!83;UBERON:0004290!2.06e-19!70;UBERON:0000490!7.78e-18!138;UBERON:0001637!1.59e-17!42;UBERON:0003509!1.59e-17!42;UBERON:0004572!1.59e-17!42;UBERON:0005256!1.09e-16!143;UBERON:0001134!3.37e-16!61;UBERON:0002036!3.37e-16!61;UBERON:0003082!3.37e-16!61;UBERON:0000477!3.93e-16!286;UBERON:0002385!1.29e-15!63;UBERON:0001015!1.29e-15!63;UBERON:0000383!1.29e-15!63;UBERON:0004573!1.72e-13!33;UBERON:0004571!1.72e-13!33;UBERON:0000486!2.21e-13!82;UBERON:0000119!6.27e-12!312;UBERON:0002100!1.04e-11!216;UBERON:0003104!2.92e-11!238;UBERON:0009142!2.92e-11!238;UBERON:0000483!3.11e-11!309;UBERON:0001986!3.30e-11!18;UBERON:0004638!3.30e-11!18;UBERON:0004852!3.30e-11!18;UBERON:0000487!7.59e-11!22;UBERON:0000481!1.43e-10!347;UBERON:0004111!6.55e-10!241;UBERON:0000468!8.27e-10!659;UBERON:0000926!4.18e-09!448;UBERON:0004120!4.18e-09!448;UBERON:0006603!4.18e-09!448;UBERON:0006914!5.26e-09!25;UBERON:0000467!6.27e-09!625;UBERON:0000475!6.47e-09!365;UBERON:0000025!6.97e-09!194;UBERON:0000480!1.05e-08!626;UBERON:0000947!4.23e-08!21;UBERON:0010191!4.23e-08!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;4.58e-13;42!UBERON:0003509;4.58e-13;42!UBERON:0004572;4.58e-13;42!UBERON:0004573;7.13e-13;33!UBERON:0004571;7.13e-13;33!UBERON:0000055;9.12e-13;65!UBERON:0007500;1.37e-12;56!UBERON:0001981;1.37e-12;56!UBERON:0004537;1.37e-12;56!UBERON:0002049;2.37e-12;75!UBERON:0007798;2.37e-12;75!UBERON:0003914;6.42e-12;74!UBERON:0004638;7.53e-12;18!UBERON:0001986;7.53e-12;18!UBERON:0004852;7.53e-12;18!UBERON:0000487;1.26e-11;22!UBERON:0004535;1.49e-10;109!UBERON:0001009;2.93e-10;112!UBERON:0006914;1.94e-09;25!UBERON:0000947;3.42e-08;21!UBERON:0010191;3.42e-08;21!UBERON:0000490;6.86e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.45e-37,109;UBERON:0001009,6.94e-36,112;UBERON:0002049,4.73e-29,78;UBERON:0007798,4.73e-29,78;UBERON:0000055,3.96e-26,68;UBERON:0004872,3.58e-24,83;UBERON:0003914,2.30e-23,117;UBERON:0007500,4.00e-23,59;UBERON:0001981,4.00e-23,59;UBERON:0004537,4.00e-23,59;UBERON:0006965,4.00e-23,59;UBERON:0000490,6.44e-22,148;UBERON:0007503,1.43e-21,78;UBERON:0002329,8.66e-20,71;UBERON:0003059,8.66e-20,71;UBERON:0007282,8.66e-20,71;UBERON:0004290,8.66e-20,71;UBERON:0009618,8.66e-20,71;UBERON:0007524,1.68e-19,73;UBERON:0003077,1.87e-19,72;UBERON:0007285,1.87e-19,72;UBERON:0001637,2.99e-18,42;UBERON:0003509,2.99e-18,42;UBERON:0004572,2.99e-18,42;UBERON:0001134,2.14e-16,62;UBERON:0002036,2.14e-16,62;UBERON:0003082,2.14e-16,62;UBERON:0002385,1.34e-15,64;UBERON:0001015,1.34e-15,64;UBERON:0000383,1.34e-15,64;UBERON:0003104,1.57e-14,160;UBERON:0009142,1.57e-14,160;UBERON:0004573,5.83e-14,33;UBERON:0004571,5.83e-14,33;UBERON:0005256,7.97e-14,122;UBERON:0000486,2.64e-13,83;UBERON:0004638,7.74e-12,18;UBERON:0001986,7.74e-12,18;UBERON:0004852,7.74e-12,18;UBERON:0000487,1.20e-11,22;UBERON:0000926,1.44e-11,315;UBERON:0004120,1.44e-11,315;UBERON:0006603,1.44e-11,315;UBERON:0002100,5.16e-11,199;UBERON:0000119,8.73e-11,309;UBERON:0000483,4.19e-10,306;UBERON:0006914,2.04e-09,25;UBERON:0000947,3.04e-08,21;UBERON:0010191,3.04e-08,21;UBERON:0004111,1.94e-07,240;UBERON:0000025,3.31e-07,192 | |||
|phase1_expression=8.53888382571616,7.49351833618441,8.03440103347036,7.00513088471913,7.15137751083661,13.9574163856059,5.06599756336621,6.94891860769514,3.13422753839806,4.91467873003018,0.697801167972428,0,0,2.97039247104112,6.62794751455832,28.9099812974263,30.1347264011988,29.9427137058823,25.8604383358969,4.55547914884115,5.91602004608334,0.940364164434263,1.71741592278634,3.28498620174922,5.39833350257652,0,0,0,7.08055698328027,8.82807615623589,0.77408061658038,0.919421224478927,1.50602959389125,0,0,0,1.17440175733939,0.553995408531877,0.601633342410425,0,0.223915474239924,0,0,0.290796477559129,0,0,0,0.411167888021826,0,0,0,0,0,0.645484683583826,1.35426486594342,0.188242339542605,0,0,0.612167784741805,0.320929027076094,0,0.329851300186716,0.199463657621632,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0,0.434377689410233,0,0.736555271975129,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0,1.20118796110804,6.8970292794538,2.64417949113945,0,1.1384259382189,0.587237189370939,0,13.2171328579026,8.96813700770458,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,2.49861453104692,1.18388626022008,0,0,0,0.144824403882799,7.31420598941885,18.1089232119982,6.64885321586358,4.69870898099936,2.00535164254356,2.60723734129483,22.2680065174308,6.8128881842369,2.83604451492204,3.54767035940102,2.19586964232815,0.72038491523742,0,0,0,0,0,1.19245312152671,2.28797964312051,0,39.5537190659743,68.8187676084899,44.0868437041645,40.1368638766047,33.1404554605826,11.5549577614828,22.1534664529019,26.6169261944409,22.057508286576,35.1456643402904,74.9262529823013,62.342312668918,69.3136243436801,86.768486961625,39.6969554462062,25.0932236478264,35.4756408749348,32.2068834182302,22.9974956198825,22.7823758296351,46.350041214393,0,11.6334079244498,0.436094052142534,3.97577561356255,6.33152558322899,5.42877641334197,0.573673241497627,7.80270440836386,6.16745360156538,10.6748995729705,14.3067178081953,6.84664277879486,39.739648260558,39.557780553457,8.77873080340602,8.64263886719998,3.28050004567315,29.0308871452198,27.953119255678,24.06123756884,5.87172493218824,7.60802838530218,7.02254033511243,13.8824836453327,8.47556789451199,14.4656093646072,46.3321114340001,40.3045094724048,9.10161361938026,12.2165084108761,9.59515849538177,5.88057043398232,8.86605169549385,17.9980824561144,15.63087758575,51.3814161460561,17.3551240234832,3.7671823494661,11.3185416073841,3.60284231971255,6.30191301777245,10.4083054530823,3.09168648054755,6.70020682793723,1.68776332241266,6.9180273664451,4.79624171063818,4.05019554026117,0.646584227275248,4.61512470271599,8.56392834934942,7.96934783859292,0,0,0.573609190778008,0,0,0.580969714347592,1.65857688024593,0.252320850875628,0,48.4993550222429,12.8648187638577,33.1523811245953,2.78620756819187,5.0531563716871,18.8107812063352,17.5328077681226,18.3168382711446,21.6176186555492,20.916426632871,21.8288969582209,19.4157083750637,16.0901601402784,25.7780595154082,107.032540920574,30.8531902367581,9.8777762719536,2.94017422771084,0,0,2.36315962672562,0,0,8.92152613552333,0,0,0.502644862058154,0,7.49359102213747,16.6389565644733,1.44331342025273,2.55046890945169,5.16598254637615,35.6585125969852,32.8719713929394,34.2457474022277,0,0,0,0,0,2.81201501960331,0,0.141775097242386,0,0.581267877027924,0.766765358330422,0,0.088048434013226,0,0.144119953416961,0,3.23839260890062,4.20187268114105,0,1.71072446022705,9.46012932870576,4.80548892550268,2.5724378936752,18.1652356639484,17.0024426844979,9.9740068716492,9.82465039759111,0,10.988935783228,22.0728636765443,56.1640159321377,1.28603687131071,2.83698264046557,2.1313774321288,32.0270705794251,3.25572963234866,20.5810084195192,11.075030265987,25.9436122582058,25.3424599338697,1.20575750823834,6.97226766880235,1.19967589418468,0,0,0,4.0736225433569,9.18895486672911,15.690059554479,16.9394128801068,10.2738161275192,12.3552064635528,4.59549090373462,0,0,0,2.7950408664471,1.30139853857622,1.54657762555539,0.335032530668698,1.91381625495949,2.24702107184155,5.9832291840805,11.189218862773,1.59498939234882,3.50119364741774,2.17012018959788,3.53550464602372,7.85087550707512,7.88512075169673,2.92853537481783,0.300946099727719,0,2.0694614258501,1.99267679560631,3.87175253937577,7.03757277191471,8.2236486134351,11.3237329857582,6.40980880980951,5.39285502046542,2.13455115606889,0,0,0.30239029332968,6.94701861892575,7.51963669111506,9.26178311629143,8.20090555236486,11.2575594794675,5.62988724002626,14.8418066444991,15.5751790740682,14.7376232009895,8.29484275739472,42.5788631930569,18.0126086612937,0,0.40101294060657,0.184161977871793,7.00368133804101,14.2031111045239,8.39196255740314,3.15839729035188,3.69673618101191,11.7652465376528,35.0734139167826,10.8718177759662,81.8880365310456,53.7496108673789,32.8192192475252,63.2331736030186,7.04460737614017,3.01013864312912,6.11703055308092,6.64860807142979,12.0892367549976,1.09629938322967,2.61435451024901,4.61610225209501,6.88830755969382,3.57916234130733,3.297312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| |||
|short_description=p6@GNG11 | |||
}} |
Revision as of 17:54, 22 January 2014
Short description: | p6@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GNG11_5end |
Coexpression cluster: | C2004_Endothelial_mesenchymal_Renal_Smooth_Hepatic_leiomyoma_Preadipocyte |
Association with transcript: | 305bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.65e-23 | 121 |
muscle precursor cell | 4.99e-17 | 58 |
myoblast | 4.99e-17 | 58 |
multi-potent skeletal muscle stem cell | 4.99e-17 | 58 |
muscle cell | 5.33e-16 | 55 |
smooth muscle cell | 8.66e-16 | 43 |
smooth muscle myoblast | 8.66e-16 | 43 |
endothelial cell of vascular tree | 4.77e-15 | 24 |
endothelial cell | 8.27e-15 | 36 |
vascular associated smooth muscle cell | 4.95e-14 | 32 |
electrically responsive cell | 3.04e-13 | 61 |
electrically active cell | 3.04e-13 | 61 |
fibroblast | 5.40e-13 | 76 |
meso-epithelial cell | 4.25e-12 | 45 |
blood vessel endothelial cell | 7.74e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.74e-12 | 18 |
lining cell | 1.58e-07 | 58 |
barrier cell | 1.58e-07 | 58 |
cardiocyte | 7.93e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.99e-07 | 14 |