FFCP PHASE1:Hg19::chr7:93551017..93551029,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2791 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4403 | |||
|TSSclassifier=strong | |||
|UniProt=P61952,Q53Y01 | |||
|association_with_transcript=1bp_to_NM_004126,uc003und.2_5end | |||
|coexpression_cluster_id=C2004 | |||
|description=CAGE_peak_7_at_GNG11_5end | |||
|id=chr7:93551017..93551029,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.83e-29!119;CL:0000055!3.80e-22!180;CL:0000183!3.02e-20!59;CL:0000680!3.92e-20!57;CL:0000056!3.92e-20!57;CL:0000355!3.92e-20!57;CL:0000187!1.71e-19!54;CL:0000192!1.50e-17!42;CL:0000514!1.50e-17!42;CL:0002139!1.51e-17!24;CL:0000115!3.24e-17!35;CL:0000393!4.01e-17!60;CL:0000211!4.01e-17!60;CL:0000359!2.79e-15!32;CL:0002078!8.23e-15!44;CL:0000071!1.51e-13!18;CL:0002546!1.51e-13!18;CL:0000213!9.12e-11!57;CL:0000215!9.12e-11!57;CL:0000057!1.16e-09!75;CL:0000220!4.45e-09!246;CL:0002321!8.27e-09!248;CL:0002494!9.89e-08!16;CL:1000413!1.66e-07!9;CL:1000497!8.84e-07!18;CL:0002518!8.84e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.82e-20;24!CL:0000115;1.48e-17;36!CL:0000359;5.02e-16;32!CL:0000071;1.38e-15;18!CL:0000192;5.43e-13;43!CL:0000187;2.04e-11;55!CL:0002078;2.88e-11;45!CL:0000393;5.83e-09;61!CL:0000211;5.83e-09;61!CL:0002494;8.49e-09;16!CL:1000413;1.58e-08;9!CL:0000213;7.69e-08;58!CL:0000215;7.69e-08;58!CL:1000497;1.55e-07;17!CL:0002518;1.55e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,7.25e-32,121;CL:0000680,2.91e-21,58;CL:0000056,2.91e-21,58;CL:0000355,2.91e-21,58;CL:0000115,9.95e-21,36;CL:0000187,1.69e-20,55;CL:0002139,3.21e-20,24;CL:0000192,4.40e-18,43;CL:0000514,4.40e-18,43;CL:0002078,4.32e-17,45;CL:0000393,6.26e-17,61;CL:0000211,6.26e-17,61;CL:0000359,8.85e-17,32;CL:0000071,1.51e-15,18;CL:0002546,1.51e-15,18;CL:0000213,1.66e-11,58;CL:0000215,1.66e-11,58;CL:0000057,4.84e-09,76;CL:0002494,9.16e-09,16;CL:1000413,1.67e-08,9;CL:0002321,1.02e-07,250;CL:1000497,1.34e-07,17;CL:0002518,1.34e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.38e-15;18!CL:0000514;5.43e-13;43!CL:0000355;2.59e-11;58!CL:0000222;4.67e-09;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;3.91e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.23e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.91e-36!79;UBERON:0007798!2.91e-36!79;UBERON:0001009!5.19e-36!113;UBERON:0004535!6.64e-36!110;UBERON:0003914!5.88e-32!118;UBERON:0004872!6.99e-32!84;UBERON:0000055!7.61e-32!69;UBERON:0001981!1.75e-28!60;UBERON:0007500!1.75e-28!60;UBERON:0004537!1.75e-28!60;UBERON:0006965!1.75e-28!60;UBERON:0000477!3.01e-24!286;UBERON:0005256!1.58e-22!143;UBERON:0000490!2.39e-22!138;UBERON:0001637!3.12e-21!42;UBERON:0003509!3.12e-21!42;UBERON:0004572!3.12e-21!42;UBERON:0000914!1.03e-20!83;UBERON:0002329!1.03e-20!83;UBERON:0003077!1.03e-20!83;UBERON:0003059!1.03e-20!83;UBERON:0007282!1.03e-20!83;UBERON:0009618!1.03e-20!83;UBERON:0007285!1.03e-20!83;UBERON:0004290!1.46e-20!70;UBERON:0002385!8.33e-20!63;UBERON:0001015!8.33e-20!63;UBERON:0000383!8.33e-20!63;UBERON:0001134!8.73e-20!61;UBERON:0002036!8.73e-20!61;UBERON:0003082!8.73e-20!61;UBERON:0000119!8.50e-19!312;UBERON:0000483!2.26e-18!309;UBERON:0004111!3.67e-17!241;UBERON:0002100!4.98e-17!216;UBERON:0000481!5.55e-17!347;UBERON:0000468!1.30e-16!659;UBERON:0004573!7.30e-16!33;UBERON:0004571!7.30e-16!33;UBERON:0000025!3.07e-15!194;UBERON:0003104!5.03e-15!238;UBERON:0009142!5.03e-15!238;UBERON:0000486!5.39e-15!82;UBERON:0000467!9.96e-15!625;UBERON:0000480!1.78e-14!626;UBERON:0001986!1.51e-13!18;UBERON:0004638!1.51e-13!18;UBERON:0004852!1.51e-13!18;UBERON:0000487!5.98e-13!22;UBERON:0000475!2.37e-12!365;UBERON:0003103!1.15e-11!69;UBERON:0000926!2.21e-11!448;UBERON:0004120!2.21e-11!448;UBERON:0006603!2.21e-11!448;UBERON:0006914!2.62e-11!25;UBERON:0000922!5.91e-11!612;UBERON:0002050!9.84e-11!605;UBERON:0005423!9.84e-11!605;UBERON:0000923!1.81e-10!604;UBERON:0005291!1.81e-10!604;UBERON:0006598!1.81e-10!604;UBERON:0002532!1.81e-10!604;UBERON:0000948!1.84e-09!24;UBERON:0005498!1.84e-09!24;UBERON:0004140!1.84e-09!24;UBERON:0009881!1.84e-09!24;UBERON:0004141!1.84e-09!24;UBERON:0003084!1.84e-09!24;UBERON:0007005!1.84e-09!24;UBERON:0004139!1.84e-09!24;UBERON:0004291!1.84e-09!24;UBERON:0000947!1.86e-09!21;UBERON:0010191!1.86e-09!21;UBERON:0007100!1.99e-09!27;UBERON:0003915!1.66e-07!9;UBERON:0004700!1.66e-07!9;UBERON:0001917!1.66e-07!9;UBERON:0004876!5.46e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.19e-18;42!UBERON:0003509;5.19e-18;42!UBERON:0004572;5.19e-18;42!UBERON:0000055;2.63e-17;65!UBERON:0007500;5.30e-17;56!UBERON:0001981;5.30e-17;56!UBERON:0004537;5.30e-17;56!UBERON:0004573;1.62e-16;33!UBERON:0004571;1.62e-16;33!UBERON:0002049;2.01e-16;75!UBERON:0007798;2.01e-16;75!UBERON:0003914;6.46e-16;74!UBERON:0004638;1.38e-15;18!UBERON:0001986;1.38e-15;18!UBERON:0004852;1.38e-15;18!UBERON:0000487;4.41e-15;22!UBERON:0006914;4.83e-13;25!UBERON:0004535;1.00e-11;109!UBERON:0001009;4.37e-11;112!UBERON:0000947;1.43e-10;21!UBERON:0010191;1.43e-10;21!UBERON:0000025;2.43e-09;93!UBERON:0000948;3.89e-09;22!UBERON:0000490;4.87e-09;33!UBERON:0007100;1.47e-08;25!UBERON:0003915;1.58e-08;9!UBERON:0004700;1.58e-08;9!UBERON:0001917;1.58e-08;9!UBERON:0002385;1.10e-07;31!UBERON:0001015;1.10e-07;31!UBERON:0000383;1.10e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.41e-40,109;UBERON:0002049,3.37e-40,78;UBERON:0007798,3.37e-40,78;UBERON:0001009,4.06e-40,112;UBERON:0004872,3.31e-36,83;UBERON:0003914,3.32e-36,117;UBERON:0000055,2.51e-35,68;UBERON:0007500,3.95e-31,59;UBERON:0001981,3.95e-31,59;UBERON:0004537,3.95e-31,59;UBERON:0006965,3.95e-31,59;UBERON:0000490,1.95e-25,148;UBERON:0001637,3.68e-24,42;UBERON:0003509,3.68e-24,42;UBERON:0004572,3.68e-24,42;UBERON:0007503,5.84e-24,78;UBERON:0002329,2.72e-21,71;UBERON:0003059,2.72e-21,71;UBERON:0007282,2.72e-21,71;UBERON:0004290,2.72e-21,71;UBERON:0009618,2.72e-21,71;UBERON:0001134,3.64e-21,62;UBERON:0002036,3.64e-21,62;UBERON:0003082,3.64e-21,62;UBERON:0007524,6.66e-21,73;UBERON:0002385,1.10e-20,64;UBERON:0001015,1.10e-20,64;UBERON:0000383,1.10e-20,64;UBERON:0003077,1.24e-20,72;UBERON:0007285,1.24e-20,72;UBERON:0003104,6.36e-20,160;UBERON:0009142,6.36e-20,160;UBERON:0005256,2.58e-19,122;UBERON:0004573,6.64e-18,33;UBERON:0004571,6.64e-18,33;UBERON:0002100,1.41e-17,199;UBERON:0000926,1.19e-15,315;UBERON:0004120,1.19e-15,315;UBERON:0006603,1.19e-15,315;UBERON:0004638,1.51e-15,18;UBERON:0001986,1.51e-15,18;UBERON:0004852,1.51e-15,18;UBERON:0000119,2.06e-15,309;UBERON:0000486,2.62e-15,83;UBERON:0000483,3.08e-15,306;UBERON:0000487,3.81e-15,22;UBERON:0004111,2.57e-14,240;UBERON:0006914,4.15e-13,25;UBERON:0000025,1.11e-11,192;UBERON:0003103,6.54e-11,68;UBERON:0000947,1.87e-10,21;UBERON:0010191,1.87e-10,21;UBERON:0000948,3.00e-10,24;UBERON:0005498,3.00e-10,24;UBERON:0004140,3.00e-10,24;UBERON:0009881,3.00e-10,24;UBERON:0004141,3.00e-10,24;UBERON:0003084,3.00e-10,24;UBERON:0007005,3.00e-10,24;UBERON:0004139,3.00e-10,24;UBERON:0004291,3.00e-10,24;UBERON:0007100,1.05e-09,27;UBERON:0005423,3.97e-09,581;UBERON:0000922,7.28e-09,592;UBERON:0003915,1.67e-08,9;UBERON:0004700,1.67e-08,9;UBERON:0001917,1.67e-08,9;UBERON:0000923,2.01e-07,560;UBERON:0010316,2.01e-07,560;UBERON:0005291,2.01e-07,560;UBERON:0006598,2.01e-07,560;UBERON:0010317,2.01e-07,560;UBERON:0002532,2.01e-07,560;UBERON:0002050,2.85e-07,564;UBERON:0006555,5.63e-07,16;UBERON:0004819,5.63e-07,16;UBERON:0001048,6.30e-07,160;UBERON:0003081,7.96e-07,203 | |||
|phase1_expression=5.81370813665781,2.35510576280081,5.21531295155093,0,0,1.74467704820074,0,3.79031924056099,1.30592814099919,2.94880723801811,0.697801167972428,0,0,2.47532705920093,1.98838425436749,6.72325146451775,9.04041792035965,14.6062018077475,16.5897151588772,0.738726348460727,0.816002764977012,0.313454721478088,0.85870796139317,1.50561867580173,1.88313959392204,0,0,0,0,0.767658796194425,0,0,0,0,0,0,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.800791974072025,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0,4.87613732627923,14.0847180537764,6.13740296848946,0.722878304769133,0.50133791063589,1.15877215168659,3.1811437882044,1.94653948121054,2.74150969775797,2.4390233720882,1.66886092816939,3.47094550068939,0,0,0,0,0,0.238490624305342,0,0,45.5165912869755,49.0333719210491,69.7752408231265,43.5287115281487,33.1404554605826,16.507082516404,25.9153758505645,39.0209306345687,34.8650937432976,41.8400765955838,23.3641003923305,110.999727434903,54.4258388332418,38.6046234363162,50.2288007686691,59.8308179503334,28.0661715782712,45.9454840371955,36.795992991812,28.4779697870439,69.4334609496244,0,0,0,0.993943903390637,4.17880688493113,1.05927344650575,1.14734648299525,8.15737279056221,3.36406560085384,5.33744978648525,1.97334038733728,6.22422070799533,11.9892498142022,21.74043311409,2.8757911252537,5.76175924479999,2.34321431833797,6.24320153660641,12.5503800739779,8.51857479145266,0.704606991862589,1.13311061057692,0.561803226808994,3.0623125688234,3.80786383666481,2.16984140469107,19.0080457165129,11.6215456760922,3.64064544775211,2.15585442544872,4.20840284885166,1.7516592782075,2.21651292387346,1.31693286264251,2.75839016219118,9.91571188783539,25.7491055773248,0.717558542755448,1.2813443329114,1.27159140695737,0.900273288253207,1.33968288009971,0,1.48893485065272,0.337552664482532,0.876933046450788,0.504867548488229,1.19664868234989,1.2931684545505,0,0.604512589365842,1.3564847384839,0.386521706326594,0,0,0,0.530119073285941,0.580969714347592,1.45125477021519,0,0,1.56449532329816,1.28648187638577,1.38134921352481,1.85747171212792,0.721879481669586,2.36613600079688,4.21461725195254,3.37415441836875,3.08823123650703,3.26819166138609,3.79632990577755,3.91010793664477,3.13954344200554,3.8474715694639,34.6933063673585,43.4749498790682,8.231480226628,4.41026134156626,0,0,2.36315962672562,0,0,3.94605963686609,0.219500570817251,0,0.402115889646523,0.462942225792648,0.977424915930974,2.07986957055916,2.88662684050547,0.927443239800615,1.05667824812239,45.3310645969772,37.9648120312821,32.9139683365855,0,0,0,0,0,0.93733833986777,0,0.141775097242386,0,0,0,0,0,0,0.144119953416961,0,0.380987365753014,0.381988425558278,0,0,1.95372236136315,0.901029173531752,0.857479297891735,1.56983518083505,0.87192013766656,3.8135908626894,2.71470603091333,0,9.298330278116,6.11657668145202,9.36066932202295,1.02882949704857,0,1.0656887160644,12.582063441917,2.17048642156577,3.29296134712308,4.23457039581856,11.3725423597615,9.50342247520115,1.50719688529793,2.61460037580088,2.0994328148232,0,0,0,0.479249710983165,0,1.42636905040718,4.34343920002738,2.87666851570537,1.96967059563885,0.224170287987055,0,0,0,1.27047312111232,0,0,1.17261385734044,0,0,0,0,2.57652132610194,0.500170521059677,0.542530047399471,0.623912584592421,0.178428988797162,1.26161932027148,1.28855556491985,0.300946099727719,0,0,1.32845119707087,1.10621501125022,2.60650843404249,2.34961388955289,0.343143423810856,0,0.215714200818617,0,0,0,0,3.2254015016441,2.455391572609,6.73584226639377,4.22859192543813,3.58195074346692,1.12597744800525,0,7.09364591492216,7.99027763909072,4.27061211271807,31.6745201802009,3.37010097533882,0,0.200506470303285,0,5.62590796006573,8.5582848963157,3.54035920390445,3.60959690325929,3.00359814707218,5.49044838423799,4.38417673959782,8.2330270536443,26.1586783363062,20.9215257490114,43.8309309687343,89.4518065603678,2.70946437543853,3.51182841698397,2.54876273045038,2.49322802678617,4.70136984916574,0.219259876645935,0,1.79515087581472,4.59220503979588,6.50756789328606,7.52199385028373,0.27470839445503,0.41254749960294,0,1.30012049207304,8.03419649220798,1.64340221096607,1.23238893691716,1.68854042198743,1.10269257987624,2.57808587683857,2.75531718437034,4.85791776271775,2.75999310504886,0,0,0.127612712494584,0,1.85938219718914,0.31481234683064,19.5170435644968,26.4908878951436,21.8245472429979,18.2685928335765,23.3508516070939,3.57812216854978,2.60510858551767,8.22586504268687,11.6284418293533,1.79128453917934,0.42793898803392,7.63687795022248,9.41938368239076,5.57604618508276,9.33425901102586,8.01124335950668,23.8575328256513,20.6063417524911,31.1731257616846,4.38870365180631,33.8761750587485,19.017026416216,1.36499911407986,7.49448789354678,12.4308928282267,11.5786722144686,16.5859743810305,21.0456424921806,2.31510213706675,0.655894752046633,25.363797120338,17.659939391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| |||
|short_description=p7@GNG11 | |||
}} |
Revision as of 17:54, 22 January 2014
Short description: | p7@GNG11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GNG11_5end |
Coexpression cluster: | C2004_Endothelial_mesenchymal_Renal_Smooth_Hepatic_leiomyoma_Preadipocyte |
Association with transcript: | 1bp_to_NM_004126, uc003und.2_5end |
EntrezGene: | GNG11 |
HGNC: | 4403 |
UniProt: | P61952Q53Y01 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 7.25e-32 | 121 |
muscle precursor cell | 2.91e-21 | 58 |
myoblast | 2.91e-21 | 58 |
multi-potent skeletal muscle stem cell | 2.91e-21 | 58 |
endothelial cell | 9.95e-21 | 36 |
muscle cell | 1.69e-20 | 55 |
endothelial cell of vascular tree | 3.21e-20 | 24 |
smooth muscle cell | 4.40e-18 | 43 |
smooth muscle myoblast | 4.40e-18 | 43 |
meso-epithelial cell | 4.32e-17 | 45 |
electrically responsive cell | 6.26e-17 | 61 |
electrically active cell | 6.26e-17 | 61 |
vascular associated smooth muscle cell | 8.85e-17 | 32 |
blood vessel endothelial cell | 1.51e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.51e-15 | 18 |
lining cell | 1.66e-11 | 58 |
barrier cell | 1.66e-11 | 58 |
fibroblast | 4.84e-09 | 76 |
cardiocyte | 9.16e-09 | 16 |
endothelial cell of artery | 1.67e-08 | 9 |
embryonic cell | 1.02e-07 | 250 |
kidney cell | 1.34e-07 | 17 |
kidney epithelial cell | 1.34e-07 | 17 |
Ontology term | p-value | n |
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