FFCP PHASE1:Mm9::chr3:66100629..66100684,-: Difference between revisions
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{{FFCP|EntrezGene=72789|HGNC=|MCL_coexpression_id=11|UniProt=A1A535,E9QP23|association_with_transcript=56bp_to_NM_145820,uc008pkz.2,uc008plb.1_5end|description=CAGE_peak_1_at_Veph1_5end|id=chr3:66100629..66100684,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002609,4.95e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002113!7.87e-11!14;UBERON:0003918!7.87e-11!14;UBERON:0005095!7.87e-11!14;UBERON:0007687!7.87e-11!14;UBERON:0006554!1.26e-08!16;UBERON:0000489!8.10e-08!21;UBERON:0001008!9.78e-08!17;UBERON:0002048!2.20e-07!14;UBERON:0000117!2.20e-07!14;UBERON:0000171!2.20e-07!14;UBERON:0000170!2.20e-07!14;UBERON:0005597!2.20e-07!14;UBERON:0000118!2.20e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.66e-13,14;UBERON:0003918,4.66e-13,14;UBERON:0011143,4.66e-13,14;UBERON:0005095,4.66e-13,14;UBERON:0007687,4.66e-13,14;UBERON:0000489,1.78e-09,21;UBERON:0002048,3.83e-09,14;UBERON:0000117,3.83e-09,14;UBERON:0000171,3.83e-09,14;UBERON:0000170,3.83e-09,14;UBERON:0005597,3.83e-09,14;UBERON:0000118,3.83e-09,14;UBERON:0006554,4.09e-09,18;UBERON:0001008,2.12e-08,19;UBERON:0005177,6.39e-07,79;UBERON:0005153,6.96e-07,17;UBERON:0005178,6.96e-07,17;UBERON:0005181,6.96e-07,17;UBERON:0002224,6.96e-07,17;UBERON:0000915,6.96e-07,17;UBERON:0008947,6.96e-07,17;UBERON:0003258,6.96e-07,17|phase1_expression=8.32774004944929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.31811709640683,0.58328969722285,0.419959264876088,0,0,0,0,0,0,0,4.65327859977075,1.05798195854407,3.80298842103708,0,0,0,0,0,0.299600110518405,0,7.15458324928496,7.02030879324791,7.15104868594699,0,0.441737081903227,7.10446635446733,4.79227355091182,6.43453150627015,0,0.127687338085188,0,2.90149833006426,3.93396867490361,4.16730696445408,0,0,0,0,1.42371680799103,2.79599168737951,0.075726193333184,0.226714680320357,13.3337664802772,0,0,0,0,0,1.68533304158102,0,0,0,11.6900038414645,0,0,0,0,0,0,5.709193985953,0,0,0,0.304465478312141,0.922461989024234,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,3.01570445070875,0,0,0,0.162241263067758,3.46253837091075,2.36373244159177,8.84529654517861,1.47309299120532,0.260240885925407,1.37941262660084,1.26043490863744,1.20563854268572,0.816437989815934,0.384341160854549,0.468508622798644,3.62184719034622,0,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0,1.39323986772945,0,0,0,0,0,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,8.74689205223918,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,3.79335801906163,9.71112357182695,16.9061603509621,19.7541788009955,27.7352056649705,22.0927832654503,41.1669856678915,41.6260617302478,41.7616616058057,26.5303902431871,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,1.30371981153621,2.8856664581782,5.86725620721255,9.5478566741835,12.3782693260727,3.70753930929818,8.19702749352193,6.86540537911202,5.10255259703959,3.4411296090305,3.9717545829156,4.91806799177139,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0.851640511249612,0.712262414669021,1.14020871547503,3.29940245945071,2.65490276679926,0.242780636154981,0.604647113929502,1.13163047853539,0.590603785761546,1.84461088766356,1.03371317267288,1.81766864738753,3.20847640546249,2.84433082142234,2.10837217149998,1.03135543248187,1.02131881726136,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,0.356737635204141,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2784661703844,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,1.19513524027894,1.94485373654635,1.04806581313991,1.2869045591501,2.44471400581777,1.44224540067226,3.53011130550997,1.01078884705519,1.52087579934144,1.32038438970253,2.1537546718073,1.21647789569252,1.37845125493472,3.81034953026459,1.62238056322798,1.73618298417335,0.824171801606613,2.06078488188156,1.37147700954166,2.12970967391205,1.66905332963125,1.16277133305863,2.1645157495526,2.19997980518359,2.0122077016005,2.89376682581627,1.08643291076689,2.80571135828869,1.77952527186261,0.591026894253381,0.818462086339379,1.23949472948773,1.35034627686799,1.74867404556562,2.33931608445408,2.36358159453128,0.57386499620653,0,0.463735671240843|short_description=p1@Veph1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:72789 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:A1A535,uniprot:E9QP23 | |||
|association_with_transcript=56bp_to_NM_145820,uc008pkz.2,uc008plb.1_5end | |||
|cluster_id=chr3:66100629..66100684,- | |||
|description=CAGE_peak_1_at_Veph1_5end | |||
|id=chr3:66100629..66100684,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,4.95e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002113!7.87e-11!14;UBERON:0003918!7.87e-11!14;UBERON:0005095!7.87e-11!14;UBERON:0007687!7.87e-11!14;UBERON:0006554!1.26e-08!16;UBERON:0000489!8.10e-08!21;UBERON:0001008!9.78e-08!17;UBERON:0002048!2.20e-07!14;UBERON:0000117!2.20e-07!14;UBERON:0000171!2.20e-07!14;UBERON:0000170!2.20e-07!14;UBERON:0005597!2.20e-07!14;UBERON:0000118!2.20e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,4.66e-13,14;UBERON:0003918,4.66e-13,14;UBERON:0011143,4.66e-13,14;UBERON:0005095,4.66e-13,14;UBERON:0007687,4.66e-13,14;UBERON:0000489,1.78e-09,21;UBERON:0002048,3.83e-09,14;UBERON:0000117,3.83e-09,14;UBERON:0000171,3.83e-09,14;UBERON:0000170,3.83e-09,14;UBERON:0005597,3.83e-09,14;UBERON:0000118,3.83e-09,14;UBERON:0006554,4.09e-09,18;UBERON:0001008,2.12e-08,19;UBERON:0005177,6.39e-07,79;UBERON:0005153,6.96e-07,17;UBERON:0005178,6.96e-07,17;UBERON:0005181,6.96e-07,17;UBERON:0002224,6.96e-07,17;UBERON:0000915,6.96e-07,17;UBERON:0008947,6.96e-07,17;UBERON:0003258,6.96e-07,17 | |||
|phase1_expression=8.32774004944929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.31811709640683,0.58328969722285,0.419959264876088,0,0,0,0,0,0,0,4.65327859977075,1.05798195854407,3.80298842103708,0,0,0,0,0,0.299600110518405,0,7.15458324928496,7.02030879324791,7.15104868594699,0,0.441737081903227,7.10446635446733,4.79227355091182,6.43453150627015,0,0.127687338085188,0,2.90149833006426,3.93396867490361,4.16730696445408,0,0,0,0,1.42371680799103,2.79599168737951,0.075726193333184,0.226714680320357,13.3337664802772,0,0,0,0,0,1.68533304158102,0,0,0,11.6900038414645,0,0,0,0,0,0,5.709193985953,0,0,0,0.304465478312141,0.922461989024234,0,0.23517741427141,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,3.01570445070875,0,0,0,0.162241263067758,3.46253837091075,2.36373244159177,8.84529654517861,1.47309299120532,0.260240885925407,1.37941262660084,1.26043490863744,1.20563854268572,0.816437989815934,0.384341160854549,0.468508622798644,3.62184719034622,0,0.378212160335639,0.527853372491847,0.219195732427575,0.278047249225598,0,0,1.39323986772945,0,0,0,0,0,0.180062061461015,0.710234206755631,0,0,0.232533944750408,0.268273401399619,0,0,0,0,0,0,0,0,8.74689205223918,0,0,0,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,3.79335801906163,9.71112357182695,16.9061603509621,19.7541788009955,27.7352056649705,22.0927832654503,41.1669856678915,41.6260617302478,41.7616616058057,26.5303902431871,0,0,0,0,0,0,0.25462585178142,0.575392274901621,0.162135226775035,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0,1.30371981153621,2.8856664581782,5.86725620721255,9.5478566741835,12.3782693260727,3.70753930929818,8.19702749352193,6.86540537911202,5.10255259703959,3.4411296090305,3.9717545829156,4.91806799177139,0,0,0,0,0,0,0,0,0.631016438832513,0.390438744296638,0.215423397732799,0,0,0,0,0.292255857911312,0,0.321321316421807,0.851640511249612,0.712262414669021,1.14020871547503,3.29940245945071,2.65490276679926,0.242780636154981,0.604647113929502,1.13163047853539,0.590603785761546,1.84461088766356,1.03371317267288,1.81766864738753,3.20847640546249,2.84433082142234,2.10837217149998,1.03135543248187,1.02131881726136,0.540183282093931,0.388076051348264,0.643011105094777,0.709360934569094,0.356737635204141,0.658196082408484,0,0,0,0,0,0,0.0603129249281559,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0.194451188344048,0.387479470433193,0,0.234714477291508,0.5208175393758,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.2784661703844,0.183151624267265,0,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,1.03787347584177,2.79317411380722,1.19513524027894,1.94485373654635,1.04806581313991,1.2869045591501,2.44471400581777,1.44224540067226,3.53011130550997,1.01078884705519,1.52087579934144,1.32038438970253,2.1537546718073,1.21647789569252,1.37845125493472,3.81034953026459,1.62238056322798,1.73618298417335,0.824171801606613,2.06078488188156,1.37147700954166,2.12970967391205,1.66905332963125,1.16277133305863,2.1645157495526,2.19997980518359,2.0122077016005,2.89376682581627,1.08643291076689,2.80571135828869,1.77952527186261,0.591026894253381,0.818462086339379,1.23949472948773,1.35034627686799,1.74867404556562,2.33931608445408,2.36358159453128,0.57386499620653,0,0.463735671240843 | |||
|short_description=p1@Veph1 | |||
}} |
Revision as of 23:11, 3 August 2015
Short description: | p1@Veph1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Veph1_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | 56bp_to_NM_145820, uc008pkz.2, uc008plb.1_5end |
EntrezGene: | 72789 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 4.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
kidney | 4.66e-13 | 14 |
kidney mesenchyme | 4.66e-13 | 14 |
upper urinary tract | 4.66e-13 | 14 |
kidney rudiment | 4.66e-13 | 14 |
kidney field | 4.66e-13 | 14 |
cavitated compound organ | 1.78e-09 | 21 |
lung | 3.83e-09 | 14 |
respiratory tube | 3.83e-09 | 14 |
respiration organ | 3.83e-09 | 14 |
pair of lungs | 3.83e-09 | 14 |
lung primordium | 3.83e-09 | 14 |
lung bud | 3.83e-09 | 14 |
urinary system structure | 4.09e-09 | 18 |
renal system | 2.12e-08 | 19 |
trunk region element | 6.39e-07 | 79 |
epithelial bud | 6.96e-07 | 17 |
thoracic cavity element | 6.96e-07 | 17 |
thoracic segment organ | 6.96e-07 | 17 |
thoracic cavity | 6.96e-07 | 17 |
thoracic segment of trunk | 6.96e-07 | 17 |
respiratory primordium | 6.96e-07 | 17 |
endoderm of foregut | 6.96e-07 | 17 |