FFCP PHASE1:Mm9::chr3:64912965..64913011,+: Difference between revisions
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{{FFCP|EntrezGene=16497|HGNC=|MCL_coexpression_id=90|UniProt=P63143,Q8CD65|association_with_transcript=-294bp_to_ENSMUST00000049230,ENSMUST00000159525_5end|description=CAGE_peak_2_at_Kcnab1_5end|id=chr3:64912965..64913011,+|ontology_enrichment_celltype=CL:0000393!5.34e-11!39;CL:0000211!5.34e-11!39;CL:0000055!5.54e-10!50;CL:0000117!5.71e-08!23;CL:0000337!5.71e-08!23;CL:0000540!8.30e-08!33;CL:0000047!8.30e-08!33;CL:0000031!8.30e-08!33;CL:0000404!8.30e-08!33;CL:0002319!1.39e-07!43;CL:0000221!4.34e-07!44;CL:0000133!4.34e-07!44|ontology_enrichment_celltype_v019_2=CL:0000222,1.01e-08,7;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39;CL:0000680,4.66e-08,6;CL:0000187,4.66e-08,6;CL:0000056,4.66e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!9.50e-23!71;UBERON:0003075!9.50e-23!71;UBERON:0007284!9.50e-23!71;UBERON:0000073!2.59e-22!75;UBERON:0001016!2.59e-22!75;UBERON:0000033!4.00e-22!63;UBERON:0001017!4.10e-22!73;UBERON:0005743!4.10e-22!73;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0001049!3.36e-20!52;UBERON:0005068!3.36e-20!52;UBERON:0006241!3.36e-20!52;UBERON:0007135!3.36e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!3.75e-19!49;UBERON:0003056!1.22e-18!49;UBERON:0002020!3.98e-15!34;UBERON:0003080!6.51e-15!40;UBERON:0002780!3.03e-14!39;UBERON:0001890!3.03e-14!39;UBERON:0006240!3.03e-14!39;UBERON:0002791!6.76e-13!29;UBERON:0003528!6.76e-13!29;UBERON:0001893!6.76e-13!29;UBERON:0000153!9.81e-11!94;UBERON:0000956!2.03e-10!21;UBERON:0001869!2.03e-10!21;UBERON:0000203!2.03e-10!21;UBERON:0007811!5.58e-10!86;UBERON:0002619!1.48e-09!17;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0000025!8.79e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.52e-26,64;UBERON:0003075,1.52e-26,64;UBERON:0007284,1.52e-26,64;UBERON:0000073,2.19e-26,54;UBERON:0001049,4.00e-24,52;UBERON:0005068,4.00e-24,52;UBERON:0006241,4.00e-24,52;UBERON:0007135,4.00e-24,52;UBERON:0001016,6.24e-24,75;UBERON:0001017,9.62e-24,73;UBERON:0004121,2.01e-23,95;UBERON:0000924,2.01e-23,95;UBERON:0006601,2.01e-23,95;UBERON:0010371,1.27e-21,73;UBERON:0000955,4.84e-21,47;UBERON:0006238,4.84e-21,47;UBERON:0002616,3.35e-20,46;UBERON:0003056,7.34e-20,49;UBERON:0010314,3.83e-18,92;UBERON:0002020,6.20e-18,34;UBERON:0003080,7.84e-16,40;UBERON:0003528,2.68e-15,29;UBERON:0002791,2.68e-15,29;UBERON:0001893,2.68e-15,29;UBERON:0002780,8.56e-15,39;UBERON:0001890,8.56e-15,39;UBERON:0006240,8.56e-15,39;UBERON:0002021,6.56e-13,10;UBERON:0000411,6.56e-13,10;UBERON:0001950,6.56e-13,10;UBERON:0000956,7.60e-13,21;UBERON:0001869,7.60e-13,21;UBERON:0000203,7.60e-13,21;UBERON:0002619,9.19e-13,17;UBERON:0000025,2.26e-11,114;UBERON:0004111,2.20e-10,122;UBERON:0003076,3.28e-09,12;UBERON:0003057,3.28e-09,12|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.1564541800001,1.46837401729345,0,3.92445281484804,1.31811709640683,1.74986909166855,0.839918529752175,0,0,0,0,12.8629718017974,34.9570796725283,32.4873418134789,0.809265843438391,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0.299600110518405,0,0.518448061542388,1.35005938331691,0.630974884054146,2.85650984403804,2.87129103237098,0.857435594504678,0.383381884072945,0.919218786610021,13.2139057199266,11.2364857514965,11.2132769277058,0.659431438650969,0.365950574409639,0.52091337055676,5.30447698102624,2.25105044012672,4.12555268997387,2.65165726926301,1.56608848879013,0.931997229126503,0.227178579999552,1.13357340160178,1.44932244350839,0,0,0,0,0,0.842666520790511,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,0.68510327831436,0,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,7.61230072230023,7.54008144528438,0.255457055208591,0,0,0,13.9305294646485,94.245124180637,4.14659361972453,24.3354048269187,15.0872119824895,15.584103341967,29.0411860891286,1.32391173005411,0.124406970610093,0.505445516867349,1.05220927943237,1.69156575851515,3.21862946206862,2.34080768746954,1.05493372485001,0.95251098811859,1.0249097622788,0.843315521037559,5.43277078551933,0,1.89106080167819,0.703804496655795,1.09597866213787,2.78047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0.938104239924385,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,33.4361018216962,1.64647379806855,0,0.528901133327089,0.639864751605702,0.928946687441754,0.515469845288373,0.403367049246685,0.889512175379481,0.380451252225118,0.474529061544512,1.31759163779209,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.505892296994058,0,0,0,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.1621352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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:16497 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P63143,uniprot:Q8CD65 | |||
|association_with_transcript=-294bp_to_ENSMUST00000049230,ENSMUST00000159525_5end | |||
|cluster_id=chr3:64912965..64913011,+ | |||
|description=CAGE_peak_2_at_Kcnab1_5end | |||
|id=chr3:64912965..64913011,+ | |||
|ontology_enrichment_celltype=CL:0000393!5.34e-11!39;CL:0000211!5.34e-11!39;CL:0000055!5.54e-10!50;CL:0000117!5.71e-08!23;CL:0000337!5.71e-08!23;CL:0000540!8.30e-08!33;CL:0000047!8.30e-08!33;CL:0000031!8.30e-08!33;CL:0000404!8.30e-08!33;CL:0002319!1.39e-07!43;CL:0000221!4.34e-07!44;CL:0000133!4.34e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.01e-08,7;CL:0000393,1.02e-08,39;CL:0000211,1.02e-08,39;CL:0000680,4.66e-08,6;CL:0000187,4.66e-08,6;CL:0000056,4.66e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!9.50e-23!71;UBERON:0003075!9.50e-23!71;UBERON:0007284!9.50e-23!71;UBERON:0000073!2.59e-22!75;UBERON:0001016!2.59e-22!75;UBERON:0000033!4.00e-22!63;UBERON:0001017!4.10e-22!73;UBERON:0005743!4.10e-22!73;UBERON:0004121!1.50e-20!102;UBERON:0000924!1.50e-20!102;UBERON:0006601!1.50e-20!102;UBERON:0001049!3.36e-20!52;UBERON:0005068!3.36e-20!52;UBERON:0006241!3.36e-20!52;UBERON:0007135!3.36e-20!52;UBERON:0000955!1.15e-19!50;UBERON:0006238!1.15e-19!50;UBERON:0002616!3.75e-19!49;UBERON:0003056!1.22e-18!49;UBERON:0002020!3.98e-15!34;UBERON:0003080!6.51e-15!40;UBERON:0002780!3.03e-14!39;UBERON:0001890!3.03e-14!39;UBERON:0006240!3.03e-14!39;UBERON:0002791!6.76e-13!29;UBERON:0003528!6.76e-13!29;UBERON:0001893!6.76e-13!29;UBERON:0000153!9.81e-11!94;UBERON:0000956!2.03e-10!21;UBERON:0001869!2.03e-10!21;UBERON:0000203!2.03e-10!21;UBERON:0007811!5.58e-10!86;UBERON:0002619!1.48e-09!17;UBERON:0002021!1.09e-07!10;UBERON:0000411!1.09e-07!10;UBERON:0001950!1.09e-07!10;UBERON:0000025!8.79e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.52e-26,64;UBERON:0003075,1.52e-26,64;UBERON:0007284,1.52e-26,64;UBERON:0000073,2.19e-26,54;UBERON:0001049,4.00e-24,52;UBERON:0005068,4.00e-24,52;UBERON:0006241,4.00e-24,52;UBERON:0007135,4.00e-24,52;UBERON:0001016,6.24e-24,75;UBERON:0001017,9.62e-24,73;UBERON:0004121,2.01e-23,95;UBERON:0000924,2.01e-23,95;UBERON:0006601,2.01e-23,95;UBERON:0010371,1.27e-21,73;UBERON:0000955,4.84e-21,47;UBERON:0006238,4.84e-21,47;UBERON:0002616,3.35e-20,46;UBERON:0003056,7.34e-20,49;UBERON:0010314,3.83e-18,92;UBERON:0002020,6.20e-18,34;UBERON:0003080,7.84e-16,40;UBERON:0003528,2.68e-15,29;UBERON:0002791,2.68e-15,29;UBERON:0001893,2.68e-15,29;UBERON:0002780,8.56e-15,39;UBERON:0001890,8.56e-15,39;UBERON:0006240,8.56e-15,39;UBERON:0002021,6.56e-13,10;UBERON:0000411,6.56e-13,10;UBERON:0001950,6.56e-13,10;UBERON:0000956,7.60e-13,21;UBERON:0001869,7.60e-13,21;UBERON:0000203,7.60e-13,21;UBERON:0002619,9.19e-13,17;UBERON:0000025,2.26e-11,114;UBERON:0004111,2.20e-10,122;UBERON:0003076,3.28e-09,12;UBERON:0003057,3.28e-09,12 | |||
|phase1_expression=0.80074423552397,0.697950815278722,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42225108785563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65818226509636,4.1564541800001,1.46837401729345,0,3.92445281484804,1.31811709640683,1.74986909166855,0.839918529752175,0,0,0,0,12.8629718017974,34.9570796725283,32.4873418134789,0.809265843438391,1.05798195854407,1.90149421051854,0,0.889294796111139,0,0,0,0.299600110518405,0,0.518448061542388,1.35005938331691,0.630974884054146,2.85650984403804,2.87129103237098,0.857435594504678,0.383381884072945,0.919218786610021,13.2139057199266,11.2364857514965,11.2132769277058,0.659431438650969,0.365950574409639,0.52091337055676,5.30447698102624,2.25105044012672,4.12555268997387,2.65165726926301,1.56608848879013,0.931997229126503,0.227178579999552,1.13357340160178,1.44932244350839,0,0,0,0,0,0.842666520790511,0.511290967734173,0.519572009205738,0.70667914902068,0,0,0,0,0,0,0,0.68510327831436,0,0.593768556259299,0.520455980298408,0,0.461230994512117,0.301445281105245,0.23517741427141,0,0,0.144599356919912,0,0,0.220841518460394,0,0,7.61230072230023,7.54008144528438,0.255457055208591,0,0,0,13.9305294646485,94.245124180637,4.14659361972453,24.3354048269187,15.0872119824895,15.584103341967,29.0411860891286,1.32391173005411,0.124406970610093,0.505445516867349,1.05220927943237,1.69156575851515,3.21862946206862,2.34080768746954,1.05493372485001,0.95251098811859,1.0249097622788,0.843315521037559,5.43277078551933,0,1.89106080167819,0.703804496655795,1.09597866213787,2.78047249225598,1.0447564995665,0.411564272815887,0.199034266818493,0,0,0,0,0.938104239924385,0,0.23674473558521,0,0.308534225774757,0.232533944750408,0,0,0,0.164167464079095,0,0,0,0,33.4361018216962,1.64647379806855,0,0.528901133327089,0.639864751605702,0.928946687441754,0.515469845288373,0.403367049246685,0.889512175379481,0.380451252225118,0.474529061544512,1.31759163779209,0,0.198956472041151,0.38992817423824,0,0,0,0.189667900953082,0.114248512609729,0,0.203651327845314,0,0.210407459670956,0.505892296994058,0,0,0,0,0.500535317148282,0.393117990226406,0,0.202860121388503,0,0.25462585178142,0,0.162135226775035,0,0,0.372140947668503,0,0.505157755894224,0,0,0,1.13694847062291,0.325929952884052,0.339490171550376,0.234690248288502,0,0,0,0,0,0,0,0,0.144649058581512,0,0,0,0,14.6101036888891,9.25972324078405,0.163934945376675,0,0.94652465824877,0.780877488593277,0.861693590931196,0.238968797952552,0.222798674082394,0,0,1.46127928955656,3.16230222357219,2.24924921495265,4.5420827266646,0.534196811001766,2.28041743095006,0.989820737835213,0,0.728341908464944,1.51161778482376,0,0,0,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,1.02131881726136,0.540183282093931,0,0.643011105094777,0.886701168211368,0.891844088010353,1.15184314421485,0.304464949114599,0.23467170806371,0,0.661585194164886,0.65954501176592,0.161464426695906,0.0603129249281559,0.358117032009409,0,0.291480836629851,12.9797711407357,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0.790839983952838,1.01659733563424,0.648032044930808,0,0,0.269728692769641,0.165306911450672,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0,0.777804753376191,0.645799117388655,0.675824501963113,0.234714477291508,0.13020438484395,0,0,0,0,0.202725215290164,0.513554785824136,0,0,0.198681354781265,0.120195449519969,0,0,0,0,0,0,0,0.680191150845634,0,0,0,0.579568782096571,0.750729901804728,1.09890974560359,0,1.00314420807073,5.0827665835536,6.44455331110048,5.72895513439397,6.35856774671644,15.0718154349541,9.06472676867641,7.42524750254986,14.8605997063993,13.1411298605419,13.4617681055473,0.31136204275253,1.59609949360412,1.02440163452481,0.972426868273176,0.419226325255965,0.735374033800057,1.11123363900808,0.824140228955577,0.962757628775446,0.758091635291392,0.760437899670719,0.754505365544305,0.749132059759059,0.768301828858431,0.804096565378586,0,0.579421629724277,0,0.824171801606613,0.883193520806384,0,0.177475806159338,0.953744759789284,0.581385666529314,0.941093804153306,0.761531471025089,0.914639864363863,0.789209134313529,0.271608227691724,0.561142271657738,0.949080144993393,0.689531376628944,0,0.464810523557898,0.771626443924566,0.749431733813838,1.16965804222704,0.429742108096597,0.57386499620653,1.10295709559758,0.231867835620421 | |||
|short_description=p2@Kcnab1 | |||
}} |
Revision as of 22:54, 3 August 2015
Short description: | p2@Kcnab1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Kcnab1_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -294bp_to_ENSMUST00000049230, ENSMUST00000159525_5end |
EntrezGene: | 16497 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.01e-08 | 7 |
electrically responsive cell | 1.02e-08 | 39 |
electrically active cell | 1.02e-08 | 39 |
muscle precursor cell | 4.66e-08 | 6 |
muscle cell | 4.66e-08 | 6 |
myoblast | 4.66e-08 | 6 |