FFCP PHASE1:Hg19::chr7:90225464..90225478,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5218 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8883 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-241bp_to_uc003uky.2_5end | |||
|description=CAGE_peak_12_at_CDK14_5end | |||
|id=chr7:90225464..90225478,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002549;1.12e-11;2!CL:0000047;2.56e-11;2!CL:0002504;1.68e-07;3!CL:1000279;1.68e-07;3!CL:0000708;1.68e-07;3!CL:1000280;1.68e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002549,1.06e-11,2;CL:0000708,1.80e-07,3;CL:0002504,2.42e-07,3;CL:1000279,2.42e-07,3;CL:1000280,2.42e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;4.21e-13;10!DOID:3095;7.68e-11;22!DOID:2994;7.68e-11;22 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.37e-13,10;DOID:3095,6.12e-11,22;DOID:2994,6.12e-11,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.79e-12;4!UBERON:0000923;1.79e-12;4!UBERON:0010316;1.79e-12;4!UBERON:0005291;1.79e-12;4!UBERON:0005629;1.12e-11;2!UBERON:0005358;1.12e-11;2!UBERON:0001886;1.12e-11;2!UBERON:0004086;1.12e-11;2!UBERON:0005282;1.12e-11;2!UBERON:0005281;1.12e-11;2!UBERON:0002050;4.53e-10;5!UBERON:0005423;4.53e-10;5!UBERON:0003210;1.68e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005629,1.06e-11,2;UBERON:0005358,1.06e-11,2;UBERON:0001886,1.06e-11,2;UBERON:0004086,1.06e-11,2;UBERON:0005282,1.06e-11,2;UBERON:0005281,1.06e-11,2;UBERON:0003210,1.80e-07,3 | |||
|phase1_expression=0,0,0.704772020479856,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.984968464614303,0.408001382488506,0.626909442956176,0,0.136874425072884,0.125542639594803,0.0764134057479513,0.164201178899891,0.314843125254717,0.393364276848904,0,0.464448369948228,0.919421224478927,0,0,0,0,0,1.66198622559563,2.80762226458198,0.868043482863407,0,0,0,0.145398238779565,0,0.242584061187816,0,0.822335776043652,0.619412741790207,0,0,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0.674170453335254,1.22433556948361,0.641858054152187,0,0.329851300186716,0.199463657621632,0,0.580418477257168,1.70215567407342,0.622822248995575,0.502497330513487,0,0.65156653411535,0,0.736555271975129,1.26584954976354,0.211255286311942,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.764546456250458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,2.01210257911091,0.255725123687061,0.361439152384566,0,0.289693037921647,0,0.486634870302636,0.283604451492204,0.665188192387692,1.22968699970376,0.261958150995425,0,0,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0.633152558322899,0.132409180813219,0.573673241497627,0.354668382198357,0,0,0,1.24484414159907,0.942974704487816,0.817309515567294,3.02714855289863,2.30470369792,0.234321431833797,0.312160076830321,0,0.149448680551801,0.23486899728753,0.485618833104395,0.280901613404497,0,0.122834317311768,0.206651562351531,0,0.247266929278557,0,0,0,0.250237039743928,0,0.438977620880838,0,0.751190294532984,0,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.194874010322397,0.252433774244115,0.184099797284599,0,0.355009592516614,0,0.339121184620975,0,0,0,0,0.265059536642971,0.232387885739037,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0.236613600079688,0.842923450390509,0.482022059766964,0.330881918197182,0.217879444092406,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,0,0,0,0,0.122988438543114,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.587043471179108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,1.00917975910825,1.74384027533312,0.66004457238855,0.258543431515556,0,0,0,1.04007436911366,0,0,0.266422179016099,0,0,0,0.325736184293735,0.710783897485092,0,0.602878754119172,0,1.09970290300263,0,0,0,0,0,0,0.144781306667579,0,0,0,0.197030760201927,0,0,1.01637849688985,3.90419561572865,0,0.167516265334349,0,0,0,0.828831026872071,0.12269149171914,0,0,0,0,0.315404830067869,0,0.300946099727719,2.27407504055985,1.03473071292505,0.664225598535437,0.184369168541703,0.347534457872331,0.587403472388222,0.686286847621712,0.206768026122887,0.431428401637234,0.640365346820666,0,0,0,0.248107807818777,0.460385919864187,0.561320188866147,0.512556597022804,0,0,0,0.462629081407967,0.177561725313127,0.574890092096664,0.519254429183621,0.464841513839837,0.241718899183244,0.200506470303285,0.0920809889358963,0,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0.170093705276516,0.431831832204279,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.309123034943167,0.54941678891006,0.495056999523528,0,0,0,0,0.462145851343933,1.07452572308291,0.137836572484531,0.107420244868274,0.290033387828457,0.596586391912706,0.178064071293475,0,0,0.255225424989168,0,0,0.62962469366128,0,0,0,0,0,0.143124886741991,0.744316738719335,0,0.762520775695299,0,0,0,0,0,1.09814811894422,1.06031162111118,0.202182481573316,0,0.421258456238981,0.48763373908959,0.731140468893853,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0.655894752046633,0.202910376962704,0,0,0,0.0982490410131212,0.35667105148125,0,0,0.658589785919804,0,0,0.0962221127255121,0,1.08890984861323,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.106824071127473,0,0,0,0,0,0,0.399158742865633,0,0,0.324621940274555,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0.284136146806413,0.23874448473769,0.593929361665277,0.307160702099232,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0.102268682502155,0,0,0.269605053441981,0,0,0.0986434056369336,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0.236387681767936,0,1.74962768029953,0,0,0.241192877250816,0,1.3269511191747,0.295547618953547,0,0,0,0.230850775511391,0.455768223388005,0.46112780877612,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0,0,0,1.22429104652196,0.063186579628488,0,0.311064574191741,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0.292357268344742,0.328461828212837,0,0,0,0.137041924646751,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0.171594997861965,0,0,0,0,0.313808538937,0,0,0,0.273810757783986,0,0.429765441419957,0,0,0.229160424011684,0,0.399358000997982,0,0,0.604651252380536,1.80149941771202,0,0,0,0,0.295282444544246,0.0846733320657845,0,0.272406812223151,0.803765742325096,0.550157746388935,0.83088067605837,0.899895566206002,0.77380195455795,0.182248669974074,0,0.0788057072991982,0.314727528809989,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.517131825446202,0.26446520348538,0,0,0,0.471612915298998,0,0,0,0.243585196761792,0,0.544017803369474,0,0,0,0,0,0,0,0,0.110929051536852,0.124192805882767,0,0.499921631848426,0,0,0,0.468334905806882,0.434763085832475,0.74627401443437,0.233713309847224,0,0.189403005275089,0.50313580350515,0,0.228840068396924,0.151230923763239,0.621748802331122,0.887130899937803,0.477890301491107,0,0.776314784381297,0.829412415681711,0,0,0.601030435988874,0,0.406870733204662,0.909243296012797,0.322231671127465,0,0.398095888698616,0.400027764663154,0.343395705182793,0,0,0,1.07220795687463,0,0.680117776536817,0.231522474323834,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0.345430341731199,0,0.276516872303462,0,0,0,0,0,0.211312123358627,0,0,0,0,0.368211900503681,0,0,0,0,4.08891448825331,0,3.90384818894258,8.07784696386395,1.73510069962603,2.23457967189298,0.318004350653419,0,0.80057074828547,2.1160556621441,0,0,0,0.159633859057151,0,0,0.0691572524642179,0,0,0,0,0.183428598521679,0.577628330751691,0.381382095467167,0,0.795664888465099,0.225630985047772,0.20170506870352,0,0,0,0.591424344868181,0.0675375846183947,0.781078098613847,0.413373593002368,0.253663240775627,1.09394961803644,0,0,0.879356221798103,0.383287282918786,0,0,0,2.04895972216168,0.177404740325278,0,0.171488009437418,0.747667062745149,0.0657727735628491,0,0.778619813244484,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,3.02227705957126,3.99874026295933,0,0,0,0,0,0,0,0.423387050190929,0.9164274741762,0.31020638566432,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0,0,0,0,0.235676547101626,0.392616934229891,0,0.8453114551668,0.509781344063451,0,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0.315543124386369,0.0679914901909147,0,0.5290268405154,0,0,0,1.64016352285603,0,6.33492505057185,0.713921808193872,0.534434810531121,0,0.250707539292375,0,0.535928260312357,0,0.103432995861895,0,0,0,0.0620747142958579,0,0.12729431655633,0.606351566874658,0.435433495793923,0.342233301085281,0,0.0717222053926763,0.332660356546013,0.569822880276821,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p12@CDK14 | |||
}} |
Revision as of 17:47, 22 January 2014
Short description: | p12@CDK14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_CDK14_5end |
Coexpression cluster: | NA |
Association with transcript: | -241bp_to_uc003uky.2_5end |
EntrezGene: | CDK14 |
HGNC: | 8883 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of choroid plexus | 1.06e-11 | 2 |
leptomeningeal cell | 1.80e-07 | 3 |
enteric smooth muscle cell | 2.42e-07 | 3 |
smooth muscle cell of large intestine | 2.42e-07 | 3 |
smooth muscle cell of colon | 2.42e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vascular plexus | 1.06e-11 | 2 |
ventricle of nervous system | 1.06e-11 | 2 |
choroid plexus | 1.06e-11 | 2 |
brain ventricle | 1.06e-11 | 2 |
ventricular system of brain | 1.06e-11 | 2 |
ventricular system of central nervous system | 1.06e-11 | 2 |
blood-cerebrospinal fluid barrier | 1.80e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.37e-13 | 10 |
germ cell and embryonal cancer | 6.12e-11 | 22 |
germ cell cancer | 6.12e-11 | 22 |