FFCP PHASE1:Mm9::chr3:144423823..144423832,-: Difference between revisions
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{{FFCP|EntrezGene=12722|HGNC=|MCL_coexpression_id=15|UniProt=Q9QX15|association_with_transcript=-18bp_to_ENSMUST00000059091_5end|description=CAGE_peak_3_at_Clca1_5end|id=chr3:144423823..144423832,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,1.35e-16,3;CL:0002006,1.35e-16,3;CL:0002024,1.35e-16,3;CL:0000553,1.45e-08,6;CL:0000556,1.45e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!2.46e-12!47;UBERON:0004872!4.55e-11!33;UBERON:0000926!2.45e-10!193;UBERON:0004120!2.45e-10!193;UBERON:0006603!2.45e-10!193;UBERON:0005172!1.11e-09!49;UBERON:0005173!1.11e-09!49;UBERON:0002417!1.11e-09!49;UBERON:0000916!1.11e-09!49;UBERON:0001048!8.34e-09!147;UBERON:0007100!1.57e-08!18;UBERON:0000948!1.57e-08!18;UBERON:0005498!1.57e-08!18;UBERON:0004140!1.57e-08!18;UBERON:0009881!1.57e-08!18;UBERON:0004141!1.57e-08!18;UBERON:0003084!1.57e-08!18;UBERON:0007005!1.57e-08!18;UBERON:0004139!1.57e-08!18;UBERON:0004291!1.57e-08!18;UBERON:0009569!1.89e-08!66;UBERON:0000466!1.92e-08!79;UBERON:0002106!1.80e-07!6;UBERON:0004457!1.80e-07!6;UBERON:0000042!1.80e-07!6;UBERON:0004854!1.80e-07!6;UBERON:0009034!1.80e-07!6;UBERON:0002095!1.80e-07!6;UBERON:0004782!1.80e-07!6;UBERON:0003281!1.80e-07!6;UBERON:0009664!1.80e-07!6;UBERON:0002296!1.80e-07!6;UBERON:0005602!1.80e-07!6;UBERON:0001179!1.80e-07!6;UBERON:0006293!1.80e-07!6;UBERON:0002107!7.52e-07!22;UBERON:0007499!7.52e-07!22;UBERON:0006925!7.52e-07!22;UBERON:0009497!7.52e-07!22;UBERON:0000015!7.52e-07!22;UBERON:0002423!7.52e-07!22;UBERON:0006235!7.52e-07!22;UBERON:0008835!7.52e-07!22;UBERON:0003894!7.52e-07!22;UBERON:0004161!7.52e-07!22;UBERON:0008836!7.52e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.04e-22,6;UBERON:0004457,3.04e-22,6;UBERON:0000042,3.04e-22,6;UBERON:0004854,3.04e-22,6;UBERON:0009034,3.04e-22,6;UBERON:0002095,3.04e-22,6;UBERON:0004782,3.04e-22,6;UBERON:0003281,3.04e-22,6;UBERON:0009664,3.04e-22,6;UBERON:0002296,3.04e-22,6;UBERON:0005602,3.04e-22,6;UBERON:0001179,3.04e-22,6;UBERON:0006293,3.04e-22,6;UBERON:0003887,2.53e-13,10;UBERON:0005172,2.13e-09,49;UBERON:0005173,2.13e-09,49;UBERON:0002417,2.13e-09,49;UBERON:0000916,2.13e-09,49;UBERON:0004872,2.48e-09,33;UBERON:0000945,2.82e-08,16;UBERON:0010039,2.82e-08,16;UBERON:0003081,4.93e-07,87;UBERON:0002075,6.11e-07,19|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,1.66554880907831,3.64455481301687,2.79824751251259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0.144599356919912,1.76922110389975,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.900310307305074,1.65721314909647,1.96764231747404,1.85120535464854,0.930135779001631,0.268273401399619,0.934122738937356,0.658239399653922,0.656669856316381,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0.610953983535943,0.969762435838129,0.420814919341911,0.632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,1.15078454980324,1.29708181420028,2.47105271869273,2.87536413054709,2.60498663367952,0.936113019343682,0.757736633841335,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,1.70870880797853,0.412773735926445,1.48155621895769,4.1441060541032,3.96413260390973,3.43167259809784,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0.675824501963113,0.469428954583016,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421|short_description=p3@Clca1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:12722 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QX15 | |||
|association_with_transcript=-18bp_to_ENSMUST00000059091_5end | |||
|cluster_id=chr3:144423823..144423832,- | |||
|description=CAGE_peak_3_at_Clca1_5end | |||
|id=chr3:144423823..144423832,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,1.35e-16,3;CL:0002006,1.35e-16,3;CL:0002024,1.35e-16,3;CL:0000553,1.45e-08,6;CL:0000556,1.45e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!2.46e-12!47;UBERON:0004872!4.55e-11!33;UBERON:0000926!2.45e-10!193;UBERON:0004120!2.45e-10!193;UBERON:0006603!2.45e-10!193;UBERON:0005172!1.11e-09!49;UBERON:0005173!1.11e-09!49;UBERON:0002417!1.11e-09!49;UBERON:0000916!1.11e-09!49;UBERON:0001048!8.34e-09!147;UBERON:0007100!1.57e-08!18;UBERON:0000948!1.57e-08!18;UBERON:0005498!1.57e-08!18;UBERON:0004140!1.57e-08!18;UBERON:0009881!1.57e-08!18;UBERON:0004141!1.57e-08!18;UBERON:0003084!1.57e-08!18;UBERON:0007005!1.57e-08!18;UBERON:0004139!1.57e-08!18;UBERON:0004291!1.57e-08!18;UBERON:0009569!1.89e-08!66;UBERON:0000466!1.92e-08!79;UBERON:0002106!1.80e-07!6;UBERON:0004457!1.80e-07!6;UBERON:0000042!1.80e-07!6;UBERON:0004854!1.80e-07!6;UBERON:0009034!1.80e-07!6;UBERON:0002095!1.80e-07!6;UBERON:0004782!1.80e-07!6;UBERON:0003281!1.80e-07!6;UBERON:0009664!1.80e-07!6;UBERON:0002296!1.80e-07!6;UBERON:0005602!1.80e-07!6;UBERON:0001179!1.80e-07!6;UBERON:0006293!1.80e-07!6;UBERON:0002107!7.52e-07!22;UBERON:0007499!7.52e-07!22;UBERON:0006925!7.52e-07!22;UBERON:0009497!7.52e-07!22;UBERON:0000015!7.52e-07!22;UBERON:0002423!7.52e-07!22;UBERON:0006235!7.52e-07!22;UBERON:0008835!7.52e-07!22;UBERON:0003894!7.52e-07!22;UBERON:0004161!7.52e-07!22;UBERON:0008836!7.52e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,3.04e-22,6;UBERON:0004457,3.04e-22,6;UBERON:0000042,3.04e-22,6;UBERON:0004854,3.04e-22,6;UBERON:0009034,3.04e-22,6;UBERON:0002095,3.04e-22,6;UBERON:0004782,3.04e-22,6;UBERON:0003281,3.04e-22,6;UBERON:0009664,3.04e-22,6;UBERON:0002296,3.04e-22,6;UBERON:0005602,3.04e-22,6;UBERON:0001179,3.04e-22,6;UBERON:0006293,3.04e-22,6;UBERON:0003887,2.53e-13,10;UBERON:0005172,2.13e-09,49;UBERON:0005173,2.13e-09,49;UBERON:0002417,2.13e-09,49;UBERON:0000916,2.13e-09,49;UBERON:0004872,2.48e-09,33;UBERON:0000945,2.82e-08,16;UBERON:0010039,2.82e-08,16;UBERON:0003081,4.93e-07,87;UBERON:0002075,6.11e-07,19 | |||
|phase1_expression=0,0.348975407639361,0.909998478779072,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0,0,0,1.66554880907831,3.64455481301687,2.79824751251259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.517875767294343,0,0,0,0.230615497256059,0,0.23517741427141,0,0.247194967734374,0.144599356919912,1.76922110389975,0.161766849947409,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411564272815887,0.199034266818493,0,0,0,0.207125772535502,0.938104239924385,0.900310307305074,1.65721314909647,1.96764231747404,1.85120535464854,0.930135779001631,0.268273401399619,0.934122738937356,0.658239399653922,0.656669856316381,0.0810688095458557,0,0,0,0,0,0,0.264450566663544,0,0,0.257734922644187,0,0,0.190225626112559,0.949058123089023,0.494096864172033,0.251335208800269,0,0.19496408711912,0,0,0.398282546508734,0,0.114248512609729,0,0.610953983535943,0.969762435838129,0.420814919341911,0.632365371242573,0,0,0,0.296452627087149,0.166845105716094,0,0.449724224769707,0.202860121388503,0.241177159752417,0.25462585178142,1.15078454980324,1.29708181420028,2.47105271869273,2.87536413054709,2.60498663367952,0.936113019343682,0.757736633841335,0.179397413521912,0,0,0.189491411770485,0.162964976442026,0.339490171550376,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0.345369963731791,0,0,0,0,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0.141940085208269,0.178065603667255,0.488660878060728,0.164970122972535,0,0,0,0,0,0,0.258428293168221,0.727067458955011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0.0603129249281559,0,0,0,0,1.70870880797853,0.412773735926445,1.48155621895769,4.1441060541032,3.96413260390973,3.43167259809784,0,0,0,0,0,0.406638934253697,0,0,0,0.134864346384821,0,0,0,0,0,0.598066184175915,0,0.388902376688095,0.258319646955462,0.675824501963113,0.469428954583016,0.2604087696879,0,0,0,0,0.202725215290164,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512200817262403,0,0.209613162627982,0,0,0.206035057238894,0,0,0.25347929989024,0,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.347652977834566,0,0,0,0,0,0,0,0,0,0.182927972872773,0.263069711437843,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Clca1 | |||
}} |
Revision as of 04:28, 6 August 2015
Short description: | p3@Clca1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clca1_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | -18bp_to_ENSMUST00000059091_5end |
EntrezGene: | 12722 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 1.35e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.35e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.35e-16 | 3 |
megakaryocyte progenitor cell | 1.45e-08 | 6 |
megakaryocyte | 1.45e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
spleen | 3.04e-22 | 6 |
cavity lining | 3.04e-22 | 6 |
serous membrane | 3.04e-22 | 6 |
gastrointestinal system mesentery | 3.04e-22 | 6 |
stomach region | 3.04e-22 | 6 |
mesentery | 3.04e-22 | 6 |
gastrointestinal system serosa | 3.04e-22 | 6 |
mesentery of stomach | 3.04e-22 | 6 |
gut mesentery | 3.04e-22 | 6 |
dorsal mesentery | 3.04e-22 | 6 |
dorsal mesogastrium | 3.04e-22 | 6 |
peritoneal cavity | 3.04e-22 | 6 |
spleen primordium | 3.04e-22 | 6 |
intraembryonic coelom | 2.53e-13 | 10 |
abdomen element | 2.13e-09 | 49 |
abdominal segment element | 2.13e-09 | 49 |
abdominal segment of trunk | 2.13e-09 | 49 |
abdomen | 2.13e-09 | 49 |
splanchnic layer of lateral plate mesoderm | 2.48e-09 | 33 |
stomach | 2.82e-08 | 16 |
food storage organ | 2.82e-08 | 16 |
lateral plate mesoderm | 4.93e-07 | 87 |
viscus | 6.11e-07 | 19 |