FFCP PHASE1:Mm9::chr3:135102406..135102433,+: Difference between revisions
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{{FFCP|EntrezGene=66105|HGNC=|MCL_coexpression_id=3|UniProt=|association_with_transcript=275bp_to_uc008rlq.1_5end|description=CAGE_peak_8_at_Ube2d3_5end|id=chr3:135102406..135102433,+|ontology_enrichment_celltype=CL:0000063!3.84e-09!66;CL:0000219!1.69e-08!54;CL:0002320!3.77e-08!46;CL:0000134!3.77e-08!46|ontology_enrichment_celltype_v019_2=CL:0000219,1.32e-08,54;CL:0002320,2.95e-08,46;CL:0000134,2.95e-08,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002405!3.04e-13!70;UBERON:0004119!8.24e-12!130;UBERON:0000925!8.24e-12!130;UBERON:0006595!8.24e-12!130;UBERON:0000490!6.31e-11!66;UBERON:0001007!6.44e-11!128;UBERON:0001555!6.44e-11!128;UBERON:0007026!6.44e-11!128;UBERON:0004921!4.06e-10!126;UBERON:0004185!4.06e-10!126;UBERON:0005057!9.62e-09!51;UBERON:0003929!1.38e-08!55;UBERON:0002384!3.77e-08!46;UBERON:0005911!1.75e-07!69;UBERON:0000077!2.33e-07!97;UBERON:0009854!2.64e-07!23;UBERON:0009856!2.64e-07!23;UBERON:0002365!2.75e-07!25;UBERON:0002330!2.75e-07!25;UBERON:0005256!3.22e-07!47;UBERON:0002193!3.40e-07!48;UBERON:0003104!4.47e-07!131;UBERON:0009142!4.47e-07!131;UBERON:0002107!4.82e-07!22;UBERON:0007499!4.82e-07!22;UBERON:0006925!4.82e-07!22;UBERON:0009497!4.82e-07!22;UBERON:0000015!4.82e-07!22;UBERON:0002423!4.82e-07!22;UBERON:0006235!4.82e-07!22;UBERON:0008835!4.82e-07!22;UBERON:0003894!4.82e-07!22;UBERON:0004161!4.82e-07!22;UBERON:0008836!4.82e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.27e-15,118;UBERON:0000925,9.27e-15,118;UBERON:0006595,9.27e-15,118;UBERON:0001007,9.51e-14,116;UBERON:0001555,9.51e-14,116;UBERON:0007026,9.51e-14,116;UBERON:0004921,7.71e-13,114;UBERON:0000490,7.29e-11,66;UBERON:0001041,7.82e-09,80;UBERON:0003929,1.63e-08,55;UBERON:0002384,2.95e-08,46;UBERON:0005256,3.55e-08,45;UBERON:0009854,2.42e-07,23;UBERON:0009856,2.42e-07,23;UBERON:0002365,2.52e-07,25;UBERON:0002330,2.52e-07,25;UBERON:0005911,3.05e-07,69;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48;UBERON:0002107,4.43e-07,22;UBERON:0007499,4.43e-07,22;UBERON:0006925,4.43e-07,22;UBERON:0009497,4.43e-07,22;UBERON:0000015,4.43e-07,22;UBERON:0002423,4.43e-07,22;UBERON:0006235,4.43e-07,22;UBERON:0008835,4.43e-07,22;UBERON:0003894,4.43e-07,22;UBERON:0004161,4.43e-07,22;UBERON:0008836,4.43e-07,22|phase1_expression=1.12104192973356,34.8975407639361,26.3899558845931,8.16653370528441,9.5170188689806,5.70789524500425,7.47560449905682,11.6210991097419,34.7748143714617,44.7063245275008,6.8487187290202,3.58974715479014,14.5520620441525,14.1621051918776,6.99530499812892,6.07425802169478,2.79824751251259,7.25562980323947,6.85572168028694,7.21462408056651,2.29616883407888,6.7517846816602,11.4927907221132,20.1590452719692,19.9586074528438,29.860062133981,21.5380998079537,20.6852383378453,15.771943814879,11.5933859689568,14.8559442139054,0.635030673459631,2.46025915033828,0,1.73310971850765,0.997407872150954,1.42918549383658,150.671387065287,102.354930132618,101.563606330917,177.645909385366,159.149597995318,154.392292263907,11.9601977076798,10.644577778049,5.68994931701213,4.69434806608824,3.70642765846759,7.90870257844099,9.13820525649132,3.77963338388479,1.43752564364972,21.4761735753903,33.3666585325218,64.1939156362106,15.1783067261209,11.747871037489,20.1112115988203,0.404632921719196,0,0,3.38844532069132,6.22506357277798,11.6986963246582,15.8218618010716,8.5257613793532,4.19440154725767,3.45796474789399,0.311068836925433,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.766124028511126,0.46081959976873,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.711858403995515,0.372798891650601,13.2520838333072,8.38844317185319,16.5222758559956,18.0689014166091,49.6379073606658,15.6513925574967,33.7883737072788,49.2829575807069,12.0782201313307,1.36344258062446,2.59786004602869,3.5333957451034,1.26759077799012,6.41632387071589,5.09610479413291,7.11066703153331,5.84525810730278,5.82727690592727,3.0331466700887,19.1828917928021,32.1082975722493,3.85949561568544,2.60227990149204,2.13125834818499,2.30615497256059,1.50722640552623,3.64524992120685,2.13633205260448,39.5511948374998,13.013942122792,16.8076004870476,4.04417124868523,6.62524555381181,3.39412677194655,11.1835056730873,0.292780797011547,0.628340120440365,10.7291963187608,12.4607729486157,11.3981518888747,18.8063936068136,0.449371918214468,0.915001205637253,0,0.173824320192276,1.27857728665165,0.83115217823824,0.324482526135515,1.83310854930569,5.97153458928446,6.57079171927554,9.25944165900485,0.910843100738926,0.689706313300419,0.720248519221397,1.35634336052144,1.29269348387523,0.2562274405697,0.562210347358373,3.10444044886819,1.07783996466421,0.567318240503458,0,1.97276159184817,1.39023624612799,16.3678518265418,10.4948889568051,0.796137067273973,11.937624184325,19.8157888478331,13.924011470384,1.24275463521301,1.40715635988658,1.80062061461015,1.42046841351126,0.787056926989615,2.00547246753592,1.62773761325285,3.7558276195946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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:66105 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=275bp_to_uc008rlq.1_5end | |||
|cluster_id=chr3:135102406..135102433,+ | |||
|description=CAGE_peak_8_at_Ube2d3_5end | |||
|id=chr3:135102406..135102433,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.84e-09!66;CL:0000219!1.69e-08!54;CL:0002320!3.77e-08!46;CL:0000134!3.77e-08!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,1.32e-08,54;CL:0002320,2.95e-08,46;CL:0000134,2.95e-08,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!3.04e-13!70;UBERON:0004119!8.24e-12!130;UBERON:0000925!8.24e-12!130;UBERON:0006595!8.24e-12!130;UBERON:0000490!6.31e-11!66;UBERON:0001007!6.44e-11!128;UBERON:0001555!6.44e-11!128;UBERON:0007026!6.44e-11!128;UBERON:0004921!4.06e-10!126;UBERON:0004185!4.06e-10!126;UBERON:0005057!9.62e-09!51;UBERON:0003929!1.38e-08!55;UBERON:0002384!3.77e-08!46;UBERON:0005911!1.75e-07!69;UBERON:0000077!2.33e-07!97;UBERON:0009854!2.64e-07!23;UBERON:0009856!2.64e-07!23;UBERON:0002365!2.75e-07!25;UBERON:0002330!2.75e-07!25;UBERON:0005256!3.22e-07!47;UBERON:0002193!3.40e-07!48;UBERON:0003104!4.47e-07!131;UBERON:0009142!4.47e-07!131;UBERON:0002107!4.82e-07!22;UBERON:0007499!4.82e-07!22;UBERON:0006925!4.82e-07!22;UBERON:0009497!4.82e-07!22;UBERON:0000015!4.82e-07!22;UBERON:0002423!4.82e-07!22;UBERON:0006235!4.82e-07!22;UBERON:0008835!4.82e-07!22;UBERON:0003894!4.82e-07!22;UBERON:0004161!4.82e-07!22;UBERON:0008836!4.82e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,9.27e-15,118;UBERON:0000925,9.27e-15,118;UBERON:0006595,9.27e-15,118;UBERON:0001007,9.51e-14,116;UBERON:0001555,9.51e-14,116;UBERON:0007026,9.51e-14,116;UBERON:0004921,7.71e-13,114;UBERON:0000490,7.29e-11,66;UBERON:0001041,7.82e-09,80;UBERON:0003929,1.63e-08,55;UBERON:0002384,2.95e-08,46;UBERON:0005256,3.55e-08,45;UBERON:0009854,2.42e-07,23;UBERON:0009856,2.42e-07,23;UBERON:0002365,2.52e-07,25;UBERON:0002330,2.52e-07,25;UBERON:0005911,3.05e-07,69;UBERON:0002193,3.13e-07,48;UBERON:0002405,3.13e-07,48;UBERON:0002107,4.43e-07,22;UBERON:0007499,4.43e-07,22;UBERON:0006925,4.43e-07,22;UBERON:0009497,4.43e-07,22;UBERON:0000015,4.43e-07,22;UBERON:0002423,4.43e-07,22;UBERON:0006235,4.43e-07,22;UBERON:0008835,4.43e-07,22;UBERON:0003894,4.43e-07,22;UBERON:0004161,4.43e-07,22;UBERON:0008836,4.43e-07,22 | |||
|phase1_expression=1.12104192973356,34.8975407639361,26.3899558845931,8.16653370528441,9.5170188689806,5.70789524500425,7.47560449905682,11.6210991097419,34.7748143714617,44.7063245275008,6.8487187290202,3.58974715479014,14.5520620441525,14.1621051918776,6.99530499812892,6.07425802169478,2.79824751251259,7.25562980323947,6.85572168028694,7.21462408056651,2.29616883407888,6.7517846816602,11.4927907221132,20.1590452719692,19.9586074528438,29.860062133981,21.5380998079537,20.6852383378453,15.771943814879,11.5933859689568,14.8559442139054,0.635030673459631,2.46025915033828,0,1.73310971850765,0.997407872150954,1.42918549383658,150.671387065287,102.354930132618,101.563606330917,177.645909385366,159.149597995318,154.392292263907,11.9601977076798,10.644577778049,5.68994931701213,4.69434806608824,3.70642765846759,7.90870257844099,9.13820525649132,3.77963338388479,1.43752564364972,21.4761735753903,33.3666585325218,64.1939156362106,15.1783067261209,11.747871037489,20.1112115988203,0.404632921719196,0,0,3.38844532069132,6.22506357277798,11.6986963246582,15.8218618010716,8.5257613793532,4.19440154725767,3.45796474789399,0.311068836925433,0.405017814995072,0.210324961351382,0.285650984403804,0.441737081903227,0.122490799214954,0,0,0,0.766124028511126,0.46081959976873,0,0.457438218012048,0,0.558365998002762,0.56276261003168,0.30559649555362,0.589257170947335,0.711858403995515,0.372798891650601,13.2520838333072,8.38844317185319,16.5222758559956,18.0689014166091,49.6379073606658,15.6513925574967,33.7883737072788,49.2829575807069,12.0782201313307,1.36344258062446,2.59786004602869,3.5333957451034,1.26759077799012,6.41632387071589,5.09610479413291,7.11066703153331,5.84525810730278,5.82727690592727,3.0331466700887,19.1828917928021,32.1082975722493,3.85949561568544,2.60227990149204,2.13125834818499,2.30615497256059,1.50722640552623,3.64524992120685,2.13633205260448,39.5511948374998,13.013942122792,16.8076004870476,4.04417124868523,6.62524555381181,3.39412677194655,11.1835056730873,0.292780797011547,0.628340120440365,10.7291963187608,12.4607729486157,11.3981518888747,18.8063936068136,0.449371918214468,0.915001205637253,0,0.173824320192276,1.27857728665165,0.83115217823824,0.324482526135515,1.83310854930569,5.97153458928446,6.57079171927554,9.25944165900485,0.910843100738926,0.689706313300419,0.720248519221397,1.35634336052144,1.29269348387523,0.2562274405697,0.562210347358373,3.10444044886819,1.07783996466421,0.567318240503458,0,1.97276159184817,1.39023624612799,16.3678518265418,10.4948889568051,0.796137067273973,11.937624184325,19.8157888478331,13.924011470384,1.24275463521301,1.40715635988658,1.80062061461015,1.42046841351126,0.787056926989615,2.00547246753592,1.62773761325285,3.75582761959467,2.56883753207773,2.30383789878873,4.10418660197738,3.64809642956351,2.48539978623065,3.07370161407471,3.08674763148855,0.630869845692382,0.823236899034275,23.4597335918497,19.5693419331023,1.2797295032114,0.696710015581316,1.54640953586512,3.22693639397348,4.89231696458715,5.70676878337677,7.11793592316767,10.2113351928887,6.53471542880701,8.15721535368718,6.62877896205008,9.88701349519644,9.94235029423593,7.16908583715722,2.0863469104839,1.14248512609729,2.25415471346161,1.01825663922657,1.35766741017338,1.75339549725796,2.27651533647326,3.98547399544926,3.61097074035162,5.30607804863742,24.0126627940591,3.17005700860579,2.35870794135844,4.94696647246678,6.8972441272091,4.58236603529592,8.65727896056827,9.49397253587675,15.2407113168533,11.8061407670875,5.75072826109418,18.2349064357567,13.7296576170407,12.6289438973556,16.6839594575378,35.2183770595258,9.60716588866344,0.947457058852424,0.977789858652155,1.35796068620151,1.64283173801951,2.68010011906905,4.52282917683426,9.17128144931655,3.94087860265477,4.20782910332672,4.46473352240964,6.22680595919804,3.45369963731791,7.08780387049407,10.5553898757491,31.0026239776664,10.3270497333998,8.82997588175144,0.80275294993896,1.64096361229084,3.11476396215683,2.01976741763498,0.631016438832513,1.17131623288992,1.07711698866399,2.62865677747807,3.56477878531831,1.13230612315533,2.42886421004937,2.63030272120181,1.18586333383957,0.321321316421807,3.26462195979018,1.06839362200353,1.95464351224291,2.14461159864296,2.65490276679926,0.485561272309963,0.906970670894253,1.88605079755898,2.06711325016541,1.22974059177571,3.87642439752332,2.54473610634254,2.13898427030833,1.8962205476149,1.05418608574999,1.03135543248187,1.36175842301515,1.26042765821917,0.776152102696527,0.428674070063185,1.41872186913819,1.07021290561242,1.31639216481697,1.8267896946876,26.5179030111993,31.9866427004368,3.08739757276947,16.6535115470895,18.2454802166373,12.0625849856312,14.0859365923701,18.2196398717018,9.32738677215522,0.927126510052548,10.0813819670733,5.15967169908056,9.63011542322501,3.57900068308913,5.33107488111998,3.20289442489132,7.9889862097112,16.6542228265153,12.4379976423981,22.9120948323627,0.632671987162271,1.01659733563424,3.56417624711944,10.8725913927524,14.4119292072477,14.0258920240214,12.0674045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| |||
|short_description=p8@Ube2d3 | |||
}} |
Revision as of 02:01, 6 August 2015
Short description: | p8@Ube2d3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ube2d3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 275bp_to_uc008rlq.1_5end |
EntrezGene: | 66105 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 1.32e-08 | 54 |
connective tissue cell | 2.95e-08 | 46 |
mesenchymal cell | 2.95e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 9.27e-15 | 118 |
endoderm | 9.27e-15 | 118 |
presumptive endoderm | 9.27e-15 | 118 |
digestive system | 9.51e-14 | 116 |
digestive tract | 9.51e-14 | 116 |
primitive gut | 9.51e-14 | 116 |
subdivision of digestive tract | 7.71e-13 | 114 |
unilaminar epithelium | 7.29e-11 | 66 |
foregut | 7.82e-09 | 80 |
gut epithelium | 1.63e-08 | 55 |
connective tissue | 2.95e-08 | 46 |
trunk mesenchyme | 3.55e-08 | 45 |
digestive tract diverticulum | 2.42e-07 | 23 |
sac | 2.42e-07 | 23 |
exocrine gland | 2.52e-07 | 25 |
exocrine system | 2.52e-07 | 25 |
endo-epithelium | 3.05e-07 | 69 |
hemolymphoid system | 3.13e-07 | 48 |
immune system | 3.13e-07 | 48 |
liver | 4.43e-07 | 22 |
epithelial sac | 4.43e-07 | 22 |
digestive gland | 4.43e-07 | 22 |
epithelium of foregut-midgut junction | 4.43e-07 | 22 |
anatomical boundary | 4.43e-07 | 22 |
hepatobiliary system | 4.43e-07 | 22 |
foregut-midgut junction | 4.43e-07 | 22 |
hepatic diverticulum | 4.43e-07 | 22 |
liver primordium | 4.43e-07 | 22 |
septum transversum | 4.43e-07 | 22 |
liver bud | 4.43e-07 | 22 |