FFCP PHASE1:Hg19::chr7:18548878..18548909,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9734 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14065 | |||
|TSSclassifier=strong | |||
|UniProt=C9JS87,B7Z928,B7Z940,E7EX34,Q9UKV0 | |||
|association_with_transcript=0bp_to_ENST00000456174,NM_001204147,NM_001204148_5end | |||
|coexpression_cluster_id=C2888 | |||
|description=CAGE_peak_4_at_HDAC9_5end | |||
|id=chr7:18548878..18548909,+ | |||
|ontology_enrichment_celltype=CL:0000548!9.28e-22!679;CL:0000004!9.28e-22!679;CL:0000255!9.28e-22!679;CL:0000012!1.00e-21!682;CL:0000144!4.46e-15!625;CL:0000063!4.06e-14!578;CL:0002371!3.90e-13!591;CL:0000003!4.82e-12!722;CL:0000055!3.15e-11!180;CL:0000066!4.19e-11!254;CL:0000220!7.22e-11!246;CL:0002321!1.23e-10!248;CL:0000057!2.30e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0002620;5.06e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.21e-12,253;CL:0002321,3.93e-09,250;CL:0002620,3.60e-07,23;CL:0000076,9.13e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!1.18e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;6.99e-09;14!DOID:120;1.93e-08;27!DOID:193;7.28e-08;29!DOID:1749;1.24e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,7.01e-09,14;DOID:120,2.36e-08,27;DOID:193,7.82e-08,29;DOID:1749,1.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0003102!4.57e-09!95;UBERON:0002097!1.72e-07!40;UBERON:0002199!7.45e-07!45;UBERON:0002416!7.45e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,2.59e-08,41;UBERON:0003102,1.39e-07,99;UBERON:0002199,2.48e-07,46;UBERON:0002416,2.48e-07,46 | |||
|phase1_expression=4.36028110249336,2.78330681058278,4.51054093107108,1.0007329835313,1.34088328328186,0.872338524100369,2.53299878168311,0.631719873426831,0,1.22866968250754,0,0,0,0,0.331397375727916,8.74022690387308,6.02694528023977,4.38186054232424,7.3189919818576,0.861847406537515,0.816002764977012,0.626909442956176,1.43117993565528,0.958120975510189,0.627713197974014,1.37544130346312,0.410502947249729,0.393553906568396,1.57345710739562,1.91914699048606,0.928896739896456,2.75826367343678,2.409647350226,6.65557218300218,0.0774672005803016,0,0,13.2958898047651,11.0299446108578,13.0206522429511,0,0.647787332037959,0,0,0.377875943688809,0,1.16214518452842,1.6446715520873,4.64559556342655,9.49384894663097,7.68482119587302,8.51336027598907,3.7922024881028,7.10033151942209,10.8341189275473,0.376484679085209,0.545812300115692,0.674170453335254,5.20342617030534,7.06043859567406,5.11469700639233,0,0.997318288108159,2.13112375266347,9.57690487474327,10.2129340444405,14.3249117268982,3.26623264833766,5.21482918420201,5.42972111762792,7.26479403160043,18.7821594353658,25.3169909952708,0,0,0,0,0,0.16072558669708,0,0,0,1.75996244461323,0,0,0,0,0,0,0,0.569212969109448,2.34894875748376,1.14681968437569,0,11.2101712596307,0,0.196709770113833,0.393010762749165,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0.812411591295047,0.384273959177026,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0.12786256184353,2.1686349143074,1.00267582127178,0.289693037921647,0,0.486634870302636,9.45348171640679,7.31707011626461,2.63504357079378,0.130979075497713,0.728590576585084,1.11235332835329,1.29818957461873,0.696518949197069,1.99436940778298,0.476981248610684,0,0,0.596287222100115,0,0,0,1.67799774483962,0,0.417989933073621,6.20200222006389,9.60568909254118,4.35136796594071,2.81980521976403,6.0821768457481,1.22031028774085,0,0.81014194788176,0.357198913136319,0,0.563057402416611,0,0,0.366403487860815,0,0,0,4.47274756525787,3.16576279161449,45.416349018934,5.44989579422746,1.06400514659507,1.68203280042692,1.06748995729705,1.48000529050296,0.311211035399766,0.942974704487816,0.653847612453835,0.302714855289863,0.576175924479999,0.70296429550139,9.36480230490961,5.13424639390004,5.67904986096844,1.17434498643765,2.42809416552197,2.80901613404497,1.22492502752936,2.7023549808589,0.206651562351531,4.75201142912821,4.69807165629258,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,2.21651292387346,2.19488810440419,3.37136575378922,2.70428506031874,0.567160915800105,9.86642996288741,2.13557388818567,3.17897851739343,4.80145753735044,1.95799805553034,9.27505944164265,5.02515512095292,7.42615861861571,2.82567314967476,6.05841058185875,3.58994604704967,0.161646056818812,7.4552014428489,4.73534861669909,1.86516651541536,12.9484771619409,13.6373060295417,11.4721838155602,0.121973706129595,0.132529768321485,0,0.829288440122964,0.504641701751257,0,0,0.643240938192885,2.76269842704961,6.50115099244771,5.77503585335668,0,0.505754070234305,0.482022059766964,0.110293972732394,0,0.474541238222193,0.808987848960987,0,0,0.738155454624648,0,0.4115740113314,0,0,0,0,0,1.47586126251736,5.49016992955282,6.14601598288303,11.240175325762,6.13226731710948,4.90718759340207,0.977424915930974,0,0,3.82570336417754,0.821860859650752,3.46479474626577,1.85194205030644,3.04406643575357,0,0,0.492434012174795,6.78612368903789,2.37809859661965,5.62403003920662,16.9661949480848,9.07360622351273,16.2996511319184,10.4628217865026,3.4504441124869,0,0,0.207328115540772,0,0,0.698476837213859,3.4378958300245,3.51652341630141,1.71072446022705,1.23392991243988,0.901029173531752,4.28739648945867,1.34557301214433,0,1.39342743059805,7.49775951395111,7.15312891703765,1.690605505112,8.51001973071586,2.08014873822732,0,2.83698264046557,0,0,0,0.823240336780769,0.977208552881205,0,0,12.0575750823834,7.84380112740265,7.39800134747222,1.2162378064119,0.502257091432126,2.10833939483032,5.27174682081482,0,1.42636905040718,6.22559618670591,2.05476322550383,5.55088986043676,0,0.591092280605782,0,0.513372145118994,0.508189248444927,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,1.89885516589815,2.49565033836969,4.81758269752337,3.6271555457805,1.87426263988341,3.31040709700491,2.27407504055985,1.03473071292505,0,1.84369168541703,11.555520724255,0.391602314925481,0,0.206768026122887,0.862856803274467,0.853820462427555,0,0,0.604780586659361,2.48107807818777,6.1384789315225,3.92924132206303,6.27881831352935,1.53512174720011,3.21707842287215,1.48418066444991,2.00472601943452,0.177561725313127,0.739144404124282,5.71179872101983,0.697262270759755,0.725156697549733,11.228362336984,8.01104603742298,0.459257792658427,4.37018803216121,2.36023946926963,5.41439535488894,19.0227882647904,5.49044838423799,1.46139224653261,8.97188845589443,0,0.340187410553031,2.15915916102139,0,1.89662506280697,1.00337954770971,5.09752546090077,5.81753206250107,3.35812132083267,0,0,7.1806035032589,2.62411716559765,9.76135183992909,0.412164046590889,2.93022287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| |||
|short_description=p4@HDAC9 | |||
}} |
Revision as of 15:51, 22 January 2014
Short description: | p4@HDAC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HDAC9_5end |
Coexpression cluster: | C2888_clear_Fibroblast_papillotubular_transitionalcell_malignant_schwannoma_squamous |
Association with transcript: | 0bp_to_ENST00000456174, NM_001204147, NM_001204148_5end |
EntrezGene: | HDAC9 |
HGNC: | 14065 |
UniProt: | C9JS87B7Z928B7Z940E7EX34Q9UKV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.21e-12 | 253 |
embryonic cell | 3.93e-09 | 250 |
skin fibroblast | 3.60e-07 | 23 |
squamous epithelial cell | 9.13e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
skin of body | 2.59e-08 | 41 |
surface structure | 1.39e-07 | 99 |
integument | 2.48e-07 | 46 |
integumental system | 2.48e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 7.01e-09 | 14 |
female reproductive organ cancer | 2.36e-08 | 27 |
reproductive organ cancer | 7.82e-08 | 29 |
squamous cell carcinoma | 1.02e-07 | 14 |