FFCP PHASE1:Hg19::chr7:150688093..150688106,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=4846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7876 | |||
|TSSclassifier=strong | |||
|UniProt=P29474 | |||
|association_with_transcript=10bp_to_ENST00000297494_5end | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_11_at_NOS3_5end | |||
|id=chr7:150688093..150688106,+ | |||
|ontology_enrichment_celltype=CL:0000039!1.87e-11!7;CL:0000586!1.87e-11!7;CL:0000313!8.17e-10!1 | |||
|ontology_enrichment_celltype_v019=CL:0000322;1.14e-10;3!CL:0000082;6.67e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,1.09e-10,3;CL:0000082,6.57e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.48e-30;1 | |||
|ontology_enrichment_disease=DOID:3493!8.80e-18!2;DOID:299!1.63e-11!25;DOID:2152!8.17e-10!1;DOID:3151!8.91e-10!1;DOID:3149!8.91e-10!1;DOID:305!3.09e-09!106;DOID:5093!4.23e-09!4;DOID:1612!4.23e-09!4;DOID:0050687!5.85e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3910;2.55e-15;2!DOID:1324;1.68e-08;15!DOID:0050615;5.00e-08;16!DOID:3908;6.58e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3910,2.37e-15,2;DOID:1324,1.65e-08,15;DOID:0050615,4.91e-08,16;DOID:3908,6.39e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004911!8.17e-10!1;UBERON:0004913!1.76e-09!1;UBERON:0003703!1.76e-09!1;UBERON:0001174!1.76e-09!1;UBERON:0004914!1.76e-09!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.55e-15;2!UBERON:0004903;2.55e-15;2!UBERON:0002757;2.55e-15;2!UBERON:0010134;2.55e-15;2!UBERON:0005408;2.55e-15;2!UBERON:0001899;2.55e-15;2!UBERON:0002173;2.55e-15;2!UBERON:0002186;2.55e-15;2!UBERON:0004821;1.14e-10;3!UBERON:0007499;1.14e-10;3!UBERON:0003215;1.14e-10;3!UBERON:0010368;1.14e-10;3!UBERON:0009911;1.14e-10;3!UBERON:0002299;1.14e-10;3!UBERON:0006524;1.14e-10;3!UBERON:0008874;1.14e-10;3!UBERON:0002169;1.14e-10;3!UBERON:0004894;1.14e-10;3!UBERON:0001987;1.70e-08;4!UBERON:0003296;2.52e-08;4!UBERON:0010133;2.52e-08;4!UBERON:0002784;2.52e-08;4!UBERON:0009856;2.52e-08;4!UBERON:0004802;6.67e-07;19!UBERON:0000115;6.67e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,2.37e-15,2;UBERON:0002173,2.37e-15,2;UBERON:0002186,2.37e-15,2;UBERON:0001905,2.74e-15,2;UBERON:0002757,2.74e-15,2;UBERON:0010134,2.74e-15,2;UBERON:0005408,2.74e-15,2;UBERON:0001899,2.74e-15,2;UBERON:0004821,1.09e-10,3;UBERON:0003215,1.09e-10,3;UBERON:0010368,1.09e-10,3;UBERON:0009911,1.09e-10,3;UBERON:0002299,1.09e-10,3;UBERON:0006524,1.09e-10,3;UBERON:0008874,1.09e-10,3;UBERON:0002169,1.09e-10,3;UBERON:0004894,1.09e-10,3;UBERON:0001987,1.70e-08,4;UBERON:0004340,1.70e-08,4;UBERON:0003296,2.61e-08,4;UBERON:0010133,2.61e-08,4;UBERON:0002784,2.61e-08,4;UBERON:0004802,6.57e-07,19;UBERON:0000115,6.57e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.44773882019626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.46112780877612,2.06442582142476,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,8.42672516545069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0.687051635306701,0.243835849964539,0,0.102662806856247,0,0,0,0,0,0,0,0.301925687133347,0,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,2.32699963398588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@NOS3 | |||
}} |
Revision as of 20:05, 22 January 2014
Short description: | p11@NOS3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_NOS3_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 10bp_to_ENST00000297494_5end |
EntrezGene: | NOS3 |
HGNC: | 7876 |
UniProt: | P29474 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 1.09e-10 | 3 |
epithelial cell of lung | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
bronchoalveolar duct junction | 2.37e-15 | 2 |
alveolar duct | 2.37e-15 | 2 |
bronchiole | 2.37e-15 | 2 |
pineal body | 2.74e-15 | 2 |
regional part of epithalamus | 2.74e-15 | 2 |
secretory circumventricular organ | 2.74e-15 | 2 |
circumventricular organ | 2.74e-15 | 2 |
epithalamus | 2.74e-15 | 2 |
pulmonary alveolus epithelium | 1.09e-10 | 3 |
alveolus | 1.09e-10 | 3 |
pulmonary lobule | 1.09e-10 | 3 |
lobule | 1.09e-10 | 3 |
alveolus of lung | 1.09e-10 | 3 |
alveolar system | 1.09e-10 | 3 |
pulmonary acinus | 1.09e-10 | 3 |
alveolar sac | 1.09e-10 | 3 |
alveolar wall | 1.09e-10 | 3 |
placenta | 1.70e-08 | 4 |
allantois | 1.70e-08 | 4 |
gland of diencephalon | 2.61e-08 | 4 |
neuroendocrine gland | 2.61e-08 | 4 |
regional part of diencephalon | 2.61e-08 | 4 |
respiratory tract epithelium | 6.57e-07 | 19 |
lung epithelium | 6.57e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung adenocarcinoma | 2.37e-15 | 2 |
lung cancer | 1.65e-08 | 15 |
respiratory system cancer | 4.91e-08 | 16 |
non-small cell lung carcinoma | 6.39e-07 | 5 |